Array 1 28411-22802 **** Predicted by CRISPRDetect 2.4 *** >NZ_PREJ01000016.1 Acinetobacter indicus strain IHIT31232 NODE_16_length_65097_cov_95.727, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28410 28 100.0 32 ............................ ATTGCTTCAATCGGGATGCCTTTTTCAATCAA 28350 28 100.0 32 ............................ GAAATATGAAATCTTGCTCTCATTACCTATTC 28290 28 100.0 32 ............................ TCCGCGCCGAACTAGCCAAACACGAAACATTA 28230 28 100.0 32 ............................ GTTTAAATAACTTCTATTTTATCGAGGATAAA 28170 28 100.0 32 ............................ TTTTTATCTCTGGATAGCGACGTTGAGATTGT 28110 28 100.0 32 ............................ GAGAAGTTGGTATTAGAGGTAAGAGATATGCA 28050 28 100.0 32 ............................ TTAAACAATTGTCCATGTAGCACCATCGGAGA 27990 28 100.0 32 ............................ ATTCCGATGGTTGGTCCATTCATTGCGCCAGC 27930 28 100.0 32 ............................ TGGGAAATGGATATTGCTTTAATGACTGACGG 27870 28 100.0 32 ............................ ATGGGATCTAAACCAAAGGTGGTGCAACAAGA 27810 28 100.0 32 ............................ AACTGGTGGCTAATCCAAGTTGCCAAAAAACA 27750 28 100.0 32 ............................ AAACAGTTGCATTGATTGACGCTATGAATGAC 27690 28 100.0 32 ............................ AAGATTCTGCTTCTAATACTTTGGCGGCTTCA 27630 28 100.0 32 ............................ AATCCACTGGCGCTTTACTTACATAGTTTGTC 27570 28 100.0 32 ............................ AATTGATTCGCTTTCAAAAAGAAAACCCTGAA 27510 28 100.0 32 ............................ AATATCTCGGCCATCTGCGCTTTTAATCACAC 27450 28 100.0 32 ............................ CTGCCGATTGGCACAAAATCGCACTGATGAAA 27390 28 100.0 32 ............................ AATGACCCAACAAACCTCCAGCAACCCTGATC 27330 28 100.0 32 ............................ AACAACATCTTTCAGCATTTTGCGGTTACTAA 27270 28 100.0 32 ............................ AAAGTGTTCCAATGTTTACTAGCTCTCTCCTT 27210 28 100.0 32 ............................ ATCCAGTCTTTCCTTCTGCGCTATTAAAATCT 27150 28 100.0 32 ............................ TGTTTTTTGGATTTCTTCACGCTGTGCATCAA 27090 28 100.0 32 ............................ AGTTTTTTTATTACCTGTTTAAACAGGGTGGA 27030 28 100.0 32 ............................ TGTCGTATCAACCAAGGTCACAACTGCACCCG 26970 28 100.0 32 ............................ CATGATCTGACCAGCTTTACCCTGGAGTCTGA 26910 28 100.0 32 ............................ TGATGCATGTGTCGCTGGTGATTTACCTGAAA 26850 28 100.0 32 ............................ TTTCATTTCCACTAATAATTGAGCTGATGTTG 26790 28 100.0 32 ............................ ACATACCTTCTTCATACAGAACTCTGATGACA 26730 28 100.0 32 ............................ ATTTTGGACTGGATTAGCTTTACGCCAATTAC 26670 28 100.0 32 ............................ TTTGTACTCATTGACTACTTGATTGAGCTTAC 26610 28 100.0 32 ............................ AAAAACCAAAAATGGCGATTCCCGTGATATTC 26550 28 100.0 32 ............................ AAGATTGATGGTGTGTATGCGCAAGTTAATCC 26490 28 100.0 32 ............................ GTGGTGTTTTACCTGTAAAATCCCACTGAAAA 26430 28 100.0 32 ............................ ACTGAGAAGAACATCGAGAGCTTAATTAAGTA 26370 28 100.0 32 ............................ TACCATCCTACGCAATCGACGATCCAATCGAA 26310 28 100.0 32 ............................ TTCATTCCCTCCAGGGCAGGCCATCGTTTATG 26250 28 100.0 32 ............................ CTTATGTTGACTATTATCACAAAGTTTGTACG 26190 28 100.0 32 ............................ AGTTGCCCGGATCTCGTCGATCTGTGCTGTAA 26130 28 100.0 32 ............................ CGACCAGACTTCTCCCAGTAGTGATTTACGGA 26070 28 100.0 32 ............................ ATCCGTGGTCATCAGCCAAAAAGCGCGTGATC 26010 28 100.0 32 ............................ AAGTCGTATCGACATTCGATGGGCAACACTTA 25950 28 100.0 32 ............................ TGCCCGTTTGCATAAACTGCATAGCGAGTGCC 25890 28 100.0 32 ............................ AAGATCAAAACCATTTAGGCGCAAGCTTTGAA 25830 28 100.0 32 ............................ ACTAAATAGAATATTGAGCTTTCGATCACCTA 25770 28 100.0 32 ............................ TGTTTTTTGGATTGCTGCCTGCCAATTGCCTT 25710 28 100.0 32 ............................ GTGCCGGCGGTGATATTGGAAAGCTGGATGAT 25650 28 100.0 32 ............................ TGTGCCTGCTGGGTCTGTCTGAGCTTGGATGT 25590 28 100.0 32 ............................ AATATACGCAGGTTAATCTGGAAGCACTGGAA 25530 28 100.0 32 ............................ AGCGCGGCGGTGTAGTGGCGCTGACTGGTGGA 25470 28 100.0 32 ............................ AGGTGCAGGCCGTTGTAGAAGCCTATGACCAA 25410 28 100.0 32 ............................ AATACGCACGGTACGCGGGTTTAATACGCCGT 25350 28 100.0 32 ............................ ATCTTGCGACAATCGTCCATCACCAGTAATCA 25290 28 100.0 32 ............................ TATTAGTGCTGGCACCAAGATGGCGGGAGGTT 25230 28 100.0 32 ............................ TGTCGTGGGTCGCCCATCCCCTCGATGCGATC 25170 28 100.0 32 ............................ ATCTTTTAACTCATCCAAGCAATCATCAACTC 25110 28 100.0 32 ............................ AGTCATACAATAATTCATTTCGCCCGTCTGCA 25050 28 100.0 32 ............................ TCAAACGGCTGGCCGTAGTAGAACGCTGGTAC 24990 28 100.0 32 ............................ AGACACAGAATTGCCAACGTACTTACTGAACT 24930 28 100.0 32 ............................ GATACAACAAATCTAATTCCGCTATTAAAAGA 24870 28 100.0 32 ............................ GCAATGTGAAGCTAAACAGCCAAAAAAGACGT 24810 28 100.0 32 ............................ AGCGTCGAGTTTAATGTGATGAAACTAACCGC 24750 28 100.0 32 ............................ TGTGGTAGCTCCTGTAAACGGATGGAGATAAA 24690 28 100.0 32 ............................ ATCAGTGGCCACAGTTCTTGATCGAACCAGGG 24630 28 100.0 32 ............................ AAAAGAAAGTAGCAGGGTTGTTATCCCCAAAC 24570 28 100.0 32 ............................ ATTTTAGCACCGATAATAATCAAGTATTTGAA 24510 28 100.0 32 ............................ AGACTCAAGCGCCTTTCTTGCTTCAGCTCGCA 24450 28 100.0 32 ............................ TAGTGGCTCGATATGGCTGCATCGGCGGCTAT 24390 28 100.0 32 ............................ AATTAAGGCGGCTGATGTGGTTTAATCTTGAG 24330 28 100.0 32 ............................ GCCCACCATCATGCCGACACCCGCACCAATCA 24270 28 100.0 32 ............................ TCCAATCACAACGCCATGATTTACTTTTCTGA 24210 28 100.0 32 ............................ TTGATCGCTGCATCTTTAAACTTGATTACTGC 24150 28 100.0 32 ............................ TTCAGCTTGTTTTCCCCAAATTTTACAGCGCC 24090 28 100.0 32 ............................ TGTTGCTTCGGGGGAATCAATCGTAAACCATC 24030 28 100.0 33 ............................ ACGGAGCTTGGTAGTTGCGGGAAAAGCGACAAT 23969 28 100.0 32 ............................ TTTCGCTAAAAATTCAGCAATCTCATCTGAAT 23909 28 100.0 32 ............................ TTTCTTCACCGTTTTTCGTATCAGCCAAGTGA 23849 28 100.0 32 ............................ ATGAGCCAGATTCTTTTGTAGTGAATCGTGAT 23789 28 100.0 32 ............................ ACATGCAAATTTGCATAGCCTAAAAGCTGTGG 23729 28 100.0 32 ............................ ATAAGCATTTTCAAATCCACAGCGAATAAAGC 23669 28 100.0 32 ............................ AAGTACGGCATCGCTGCAAATACCTATCCAAA 23609 28 100.0 32 ............................ ACCTACCGACAACGCCGCATCTTTGACGATAC 23549 28 100.0 32 ............................ ATAAACCACAATGAACCGCATAAGATTTATCT 23489 28 100.0 32 ............................ AACTCCTGATCGCTTTTATCTTCAATTCCTAA 23429 28 100.0 32 ............................ TACAACAGCTGAACTTCAGGCTGCATTAAAAA 23369 28 100.0 32 ............................ TACAACAGCTGAACTTCAGGCTGCATTAAAAA 23309 28 100.0 32 ............................ ATGCAACAATCAAAACAGCAAGAGCTGCACTA 23249 28 100.0 32 ............................ ATTTGCATTGACTGCTTTTGCAGAAATATCCT 23189 28 100.0 32 ............................ TTCACATGAAGCCAATACTGGCAATGGTGCAA 23129 28 100.0 32 ............................ AGCAAGTCGAATCGCTAGATTCAAACGCACTG 23069 28 100.0 32 ............................ AAAGCATCATCAATAGCAGCATCAGGAACCGG 23009 28 100.0 32 ............................ ATCTAGCGGTGATTTAAATTTTATGGTTTTGG 22949 28 89.3 32 ..........ATG............... TCTCAGCACACACCGAACAGGGTGAAGTCGAA 22889 28 89.3 32 ..........ATG............... TCAACATTAAGACGTTATGGTGTTGATCCAGC 22829 28 89.3 0 ..........AT............A... | ========== ====== ====== ====== ============================ ================================= ================== 94 28 99.7 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : TTAGATTTACGAAAATGGTTGGAACGATTAGAGGACTATGTACATATCACCTCTATTCGAGAAGTACCTAGCGATATTAAGAGCTATACCATTTATAAGCGTAAACAAGTAAAAACCAGTGCACAACGTTTGGCACGTCATCGTGTAAAACGTGGCGATATTGGTTTTGATGAGGCATTAGCAAGATATAGCAATGTAGTTACCAAAACGAACTTTCCATATATCGAAATGAAAAGTCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCGAAACTCAAGTTTTTAGTACTTATGGATTAAGTTCGGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAATAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATGGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTTTTTACGTTAAAATTATT # Right flank : TATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATCAGGTACATCCTAAAGCTAGCCTTTGGGCAGAGTATATGTTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //