Array 1 2673923-2675147 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP032637.1 Lacticaseibacillus paracasei strain ZFM54 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2673923	    36	 100.0	    30	....................................	TCGCTTCGCTCCCTAAAAATCAAACCCGCC	
   2673989	    36	 100.0	    30	....................................	CGAGTCGGCACGGATTCAACATGCGGCACA	
   2674055	    36	 100.0	    30	....................................	ATACAAAAAAAATCATACAGCCTGCATCAC	
   2674121	    36	 100.0	    30	....................................	CTAAACGTTCGCGAACCTCATTCAAGCTAA	
   2674187	    36	  97.2	    30	..............................G.....	ATGGATGATGCATTTGATCGACAGTGGCCC	
   2674253	    36	 100.0	    30	....................................	GTGTTAGACTTAGATGTGGATGTTGCCCCG	
   2674319	    36	 100.0	    30	....................................	ATACCAAGGCGGTGGCATGGCGTATACTGA	
   2674385	    36	 100.0	    30	....................................	AGAACTGGACGCCGAACGCTTGGACACGCC	
   2674451	    36	 100.0	    30	....................................	CCCTTTCGCCGCCATCTTTGATCGCCCACG	
   2674517	    36	 100.0	    30	....................................	GCTATCTGGCTTGAATTCCTTAATCGATTT	
   2674583	    36	 100.0	    30	....................................	AAGCCGATGATATAAAGAAAGACGCCCCTT	
   2674649	    36	 100.0	    30	....................................	GAGGCTTACCCCGTCTTTACCAGTTGGTCC	
   2674715	    36	  97.2	    30	..............C.....................	TTGTTCATAGCAGCGTTGGCACGGGTATTG	
   2674781	    36	 100.0	    30	....................................	ATGAAAGCCAGCGAAGGCACATTTTTTACT	
   2674847	    36	 100.0	    30	....................................	AACGTTGACCGCTCTGTCTCACGAAACTGG	
   2674913	    36	 100.0	    30	....................................	GAACTTTGTATCGTTTCTCTTTGCGCACGG	
   2674979	    36	 100.0	    30	....................................	ACGTTAAACGTACACCATGCCGCACAGTCC	
   2675045	    36	 100.0	    30	....................................	GACGATCTCGCACATGCTCAGTGATATGCG	
   2675111	    36	  91.7	     0	..........................T..A....C.	|                             	T [2675143]
==========	======	======	======	====================================	==============================	==================
        19	    36	  99.3	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGCTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGGATTTAATTCAAGATCCATTCTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTCGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGACTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAATGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTTGTTCTCATTGAGTTCTCAAAAGTGAACCGAAGGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACCA
# Right flank :  CCATAATTCCGAGAAAATGAATTGGCGGATTTTAGAGTCAATCTCATGCTAGAAATAACCAATTCCGCAACTTTAACGTCTTCGGTCTGGTTAGCGTTCGCAATATTGATGGCTCTAGCAACTCAGGTAATTGCCGGTGCGGTTTTCGTGGACCGCTAACATCTTTATTATGCCGTCAGCCATGCTTCAAAGTTAGGGATGTCTTTAACGTACCTGCTGGTGTTGACTATGACATCTGCTACTCAATTAATATTGCCGATTTGCTGACTACACAACTGCCTCTGTAGTGGGAATATAGGCAGTGACGCCTGTAACAATATGATTTAACATTCAAGTTTCTTCAAGGGAAAACATATGCGAGTGCTCATGTCCTTCAAAATGTTTGATGACTGCGAACATCATCGATTATTGTGAAACAGCAGGCATACCTGTCTAAACTTTTTTCGATCAGTGCTTAATTAACGAAGTTCTTCTGTGTCAGTCGCAACCTGAGTTGAGAG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.50,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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