Array 1 22982-23211 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJF01000026.1 Clostridium botulinum strain Prevot 1542 CbotD0074-20515_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 22982 29 100.0 37 ............................. TTAGCTTTCAATGCCATAGCCATAGCTTTGTTACTAT 23048 29 100.0 37 ............................. TTTATTTATCACCTTCTTTAATTGTATAAATGATACT 23114 29 100.0 38 ............................. TAATATAACTTTAATAGTATGATAATCTGGAACTATTT 23181 29 96.6 0 ........A.................... | TA [23205] ========== ====== ====== ====== ============================= ====================================== ================== 4 29 99.2 38 GTTGAACATTAACATGAGATGTATTTAAA # Left flank : ATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACCAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTATG # Right flank : AAATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTATAATTGTAAGGAGGTGAGAAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 132638-133325 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJF01000031.1 Clostridium botulinum strain Prevot 1542 CbotD0074-20515_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 132638 28 100.0 37 ............................ TTTGAATATAAATAGGCTTCATCATTATATGAAACGT 132703 28 96.4 38 .............A.............. CTATCTAACCATTTTACTAAAGCTTTTGTACAATCCGT 132769 28 92.9 38 .............A...........G.. TTTTCTGTTCCATACATTTTTTCTACTTTGAAATTTGT 132835 28 100.0 37 ............................ TACTATGATAAGAATGGAAACTTACAAAGTGCTTTGT 132900 28 96.4 39 ......A..................... AAAGGAACTTCTTTATATCCCGCATTATAATTAACTCGC 132967 28 89.3 39 ......A......AG............. TCTTGTACGTCAACCCCTGCGGTTAAAACTAATACTTGT 133034 28 92.9 38 .............AT............. AGTAATTCCGTCCCACCTACAGCAAATTTGGCATTTGT 133100 28 96.4 38 ......A..................... TCCCATAACATCCATTTTAGCCATCCCCAAGATTCTGC 133166 28 92.9 38 ......A......A.............. GGGTTTTCAAGGCCGAATTTTCGGCTACCAAGCTTAAT 133232 27 85.7 37 ....T........-..G.......G... GGACTCATTGGGAATGTAATTGTGGATACTTTCATGT 133296 28 89.3 0 .............A.A...........A | TA [133318] ========== ====== ====== ====== ============================ ======================================= ================== 11 28 93.8 38 TGAACATTAACATGAGATGTATTTAAAT # Left flank : GGCAGATGCCATAGTAAAAGGGTTAGTAGGACAAACTACAAGTAGTACCCCAAGCAAACCATCTACAAACAATAATAGTTGGGTTAATTTAGATGGGAAAACAGGTACTATATGTACTCCAAGTGGTGTAAATGTTAGGGAAAAGAAATCTACATCTTCTAAAATATTAGGTGCTTTACCTAATGGATCAAAGGTACAATTATATCGTAAGGAAGGAGATTGGATACATATATATTATCCACCACATGGAGGGTATGTGTATGCTAAATATATAAGATATTAAGTTTTAGAGGTATTTTCCCTCATGGAAATACCTTTTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTAGTCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATTATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATACTTCTATGTTATCCTTAAAAATAAGGAATGGCTATTTTACTATGGT # Right flank : AATAGTAATTGTAGCTTATGCTGTAGTTATTATTTTTTTACTATTTAAAGGAATTTTTTAACATTTATAGAATGTTAAATATAACGGTTTCCCAATAGGTTAATTATAGACATCCCTCATAATACAAAAGAACCCCAATAAATGGGGTTCTTTTGTTGTGGAATTTTCTATTTGGTGCTATATATTGGTCTATTTTTATTATATCTAGGCATAAAAAATTTAATCCAGGGAAATTATTTTTCCTTGGATTTATAATCAGTATATAATTTTTCTATAAACTCACCCATGGAGCAGTTGAGGTCTAAAACTTCTTTTTTCATTTTAAGCTTTATATCTTTATCTATCAATACCGTTAATTTTTCTCTATTCTCATTTTTAGATTGTTTTTTATTCATCTAATCACCTCTAATAAACTTATAAATTAATTATACTATAAGAATAATTAAAAGTACATAAAAAGGTGTTGACTTATACGGCAAAATGATTTAATATAAAAATAT # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : TGAACAATAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 159685-159393 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJF01000019.1 Clostridium botulinum strain Prevot 1542 CbotD0074-20515_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 159684 31 96.8 35 ........A...................... AGAAAATATCATTTAGATTATTGTTTCCTGTATAC 159618 31 100.0 33 ............................... GGCATATTCTTTTCTGTTCTCACTATACCTTAT 159554 31 100.0 34 ............................... GTATCAAGCTAATTTATATAAGTCTAAGTATTCT 159489 31 100.0 35 ............................... TAAGTATATTCCAATACATTGCACCGCCCATCTGA 159423 31 87.1 0 G...........................GCA | ========== ====== ====== ====== =============================== =================================== ================== 5 31 96.8 34 ATTGAACATTAACATGAGATGTATTTAAATT # Left flank : ATTTTGAATTTATTATTGTTGATTAAAGGAATAGTAAATTATTTCAACAGAGCAACAGGATAATATTTTTAACAAATACCTGTACAAAGTATCGTTCTATGGGAATGTCTATGAAAACTATTATTACACAATTTGGTCAGGAAGAAAATAATTATAAATTGATAGAAGAAAAAGAAGCAATGTATCAATTAGAAGCCTTAAAAAGGGCTAAATATTACATGAAGTTAACAGATGATATTTAAAAAAGTTCTTGTTTAGGTATATAAACAATTTTCACTTTAACCATAATAATTTCCATTTGTTTTTTAAGTATTAATTTAAGTTTTTCCAAGTGAATTCAATTTTAAAATCTGTTCTAGCTATTGACATTTAAGGCTTATAGCAGGTTTTTATTATGAATTTTTTAAAAAGCAAAATCACTTGGGAAAATTTCTACCAAGCCTTGTGAAATCAATAGTTATATGCTATTCTTGAAATTAGGGAATGGCTATTTTATTATG # Right flank : GAGAACCCAAATCTAAGATTTGGTGTGGATCGCTTACTCTTTAAGAATGGTACAGGGATTTTTATAAAACTAAACTATGCATTGTGATAATTTCTATGTAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTTAAATTTTGTTGCAGCAATATTGCTTGTAGTTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTGGGAATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAATCATAAATAAATTTAATTTTAAAAACCTGTCTATTTAGGACAGGTTTTTAGTATTTAAAGGGAATAGATAAAATAGTTTTTTGTAGTCGTGTAAATATTGTATATTATTCTGTATTTTTGAAGGATTATCCATAACTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGCATTGTGGATAAATTTCGTAATATG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 170459-170234 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJF01000019.1 Clostridium botulinum strain Prevot 1542 CbotD0074-20515_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 170458 31 100.0 34 ............................... TATTTAAAAAAGAGAACTTGGGTTTTATGTCTAA 170393 31 100.0 35 ............................... CCATTTTTCTATCTAAACAAAGTTGGTAACAAGCT 170327 31 96.8 33 ........T...................... CGATCTTACTATAAGTTTTCACTCGTTATTCTG 170263 30 77.4 0 .C.A....G...T..A.........-....T | ========== ====== ====== ====== =============================== =================================== ================== 4 31 93.6 34 GTTGAACAATAACATGAGATGTATTTAAATC # Left flank : GATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAACCAACTTTAGCTTGCAAACCTATCTTAGCTCTTGAAATATAAGGCTTAAGGTAGGCTTTTTTTATATATTTATAAAATATTATAATCGGTTGGAAAATTTTCTTTAAAACCTTGTAAAACCAATGTCTATGTGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : GGGATATGATTTTTACATTAATTAAATAATAATCGTAGTTTATTATAAAATAGTATGGAGGTAGATTTTGAAGCTTAAAGTAGTATTTTTAATTAGTCTTATTATGTTTATTCTTGGTATATACTTTCCCAATAAGTCTAATTTTATGATTTTAATTGGAATATTAGGTGGAGGAATAATGGGATGTGTATAAGCATTTATAGGACATTCTAGAACAAATGTTATTAAAGATAAAGAGACTAGTTCATAAAAGAATTAATTTTTTATTATCTCATGAATTAGGCATGTGTTAAAGTTTTCAATATTAACATAAGCATTAAAAATTAATATTATATATGATAAAAATTACTAGAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATGGAATATGATAGGTAATTAATTTATTAATAAAAATAATAATATTTTTAAAATATAAGTAGAATAATTAGTTATATTAACTAAAAGGTGTATGGTATAATA # Questionable array : NO Score: 5.54 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 3 171666-171370 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJF01000019.1 Clostridium botulinum strain Prevot 1542 CbotD0074-20515_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 171665 30 100.0 37 .............................. AATTATATCTTTCTTTTGTTCTACCCAATAAATAATC 171598 30 100.0 36 .............................. TAGATTATTGGAGATATAGAAACAAATCCTCTTTGT 171532 30 100.0 36 .............................. TTATAATGTCTTGACGTTTTTGCCTAAATTGATGAC 171466 30 100.0 37 .............................. CTGCGTTTGTAGATATTCCTAGCCTGTCCTTTATTTC 171399 30 90.0 0 .......................C.G...A | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 98.0 37 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAAGCCTACATTCATGTATTTACTTTGTTTTTTGTAGTAAATATTTATGATATGATTGTTTTAGATATATGTATTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGGAGTCCATGGCATCATATAAAAGGGGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGCTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAGATCTTAGATTTGGTGTGAGCCGCTTACTCCTTGGAGAGTAGGATAAAGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGAATAGGTTTGTTTTATGTATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AAACAAATAACGATGAAAAGATAACAAATAATAATTAAGGTGGTTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAACTAACAGCAAATATTATACAGAAAACTATAGAGAATCAATTATAAGCAGTAAAATCTAATTTTATAGTTAGTTTTTTTATAGAATTTTATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAACATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTCAGAGATTAAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 4 185301-184874 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJF01000019.1 Clostridium botulinum strain Prevot 1542 CbotD0074-20515_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 185300 30 100.0 35 .............................. ATTTTTATATATGGTAAGGAGGTAACAAAAGTGTT 185235 30 100.0 37 .............................. CATACAATGTCTGTTTTACTTCTTCCCGTCTTGTTAC 185168 30 100.0 38 .............................. CTGTCTGTTTTTGTTTCATTACTAGTAGAAGTATTTAA 185100 30 100.0 37 .............................. GCTGTTAAGCCTTTTATGTTCTTAAACTTGTACGTAA 185033 30 100.0 32 .............................. TGGAAGCATGGAGGGCTAGATTGGACAAGTAC 184971 30 100.0 38 .............................. CTAATCCCATGTATTTTCCAGAGCTCAACTGGAAGAAT 184903 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATATTTATGGTGTCAGATACTGTGCGTCCATTATAGTAGTTTTTCCAGGTAAATTAAAAAATAAAAGTAATGTAAACTCAATCATATTAGTGGTTTATATAGGACTTTTTATAGAAATTTCTATTTTATAAAATCATCTGGAAAGCTTTCTGGAAAATTTTAGTATTTAAATGGGGGTGTGCTATTTTAGATTTTAAGGAATATTCATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCCGTTGATATATAAGGCTTAGGATAGGTTTTGTTTTATATTTATTAAAAAACGTAATCACTTGGAAACCTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAACAAGGAATGGCTATTTTACTATG # Right flank : ACTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTATTTTTGGGTTATTGACTTGTAGTCTAAAGCTACACCATAAGAAGGTTCATTAAACACATGTGGAGGAACAAGTAATAGATACAGCACTTGCTATTGATGCGGTGAATTGTATTACAAATAACGAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATTATAATCTAAGTAAATTATAAAAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTATACGGAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACCTACAATGATAAAGTAGGTCCTGATTTTTATTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //