Array 1 240638-240963 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE159726.1 Dorea sp. 5-2 acPFE-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 240638 36 100.0 37 .................................... CTTTCAACCATTTCTTTCACTGTAATCTCTCTCATGA 240711 36 100.0 38 .................................... GCTCTTTAATCTGCTCTCTTGCGTATTCTCTCATGATC 240785 36 100.0 35 .................................... CAATATCTACCGAAATCTTGGTATAATCATCGTTT 240856 36 100.0 36 .................................... GTTCCCTCAAAAAACTTTTGAATACTGGCATATCTT 240928 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 100.0 37 ATTGAGAATATAGAGACCCCGAGAGGGGACGGAAAC # Left flank : TGATGATATTCTGACTGTATTAGAAGATTTTCAGCAAAATGTATATAAAAATTATTATTCCCGTTTCCGGAGAGGATCGGAGGAGAAAGGTATTGTGTGGCTTGGAGGCGGGAGCGGCTTCTTATCGAAGACGATAATTTATCCCGTTTTTGAAAAAGATGCCGTAAGAATAACGGATGCGATTTTTAAGAATACATTGGGCAAGAATTATAGTATACATAAGCATAATAAGGATATTTCATTGAGAATTGCGCCGCATGTATGCAAATGTACCTATTATAATGGTCGTTTGTATGACATGGGAATGGGAAAAATAGAAGTCTTATCAAAGTGATTTGCTCATGCAGATATATAGAAATAAGTGATTTTGCGCCGCAGCCCGTAAATACAGTGGAAAATATGTGTTTGTGGCAGGATCTGAGTGCTGTAAATAGGATTCAGGGTTTTGCCCCGCAAATGTGGGATGGAAGTTAGAAGATGTAAGGGCTGCGGAAGGTAGG # Right flank : CGTATGTACACTTTACGGTATGTACACTTGCGCTTTTATTGAGAATATAGAGACCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTGAGAATATAGAGACCCCGAGAGGGGACGGAATACAAACATAATTCAGAAATTAAAACGAAAGACTAAAAATCCGAAAATTACAAAGGAAACAAAATGTATCTTATGAATGGAGGAACAAAAGATGAGCTATTTATATGTTGCCGAACAAGGAGCAACGATAGGAATTGCAGAT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAATATAGAGACCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [14,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 262959-263495 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE159726.1 Dorea sp. 5-2 acPFE-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 262959 32 100.0 35 ................................ GAATAGGACTCAGGATCTTGTAATGCACAATACGC 263026 32 100.0 34 ................................ GCCGAATATCGGGAAGTATGCGAAGGTATATACA 263092 32 100.0 7 ................................ NNNNNNN Deletion [263131] 263131 32 90.6 34 NNN............................. GCCGAATATCGGGAAGTATGCGAAGGTATATACA 263197 32 100.0 34 ................................ CAGATTGCGGACAGGCGGACGGCAGACGGCCGGG 263263 32 100.0 35 ................................ TGTGATATTTGGGAAAATCAGGAAGGTGATCACGG 263330 32 100.0 35 ................................ TATCAGTAATGCCGGCGCCTTGGTATGATTGAGCA 263397 32 100.0 35 ................................ CATTAAGGCTGTGGGCTTATTACGGGAAAATCGCA 263464 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.0 31 GTCACTCCCTGTGTGGGAGTGTGGATTGAAAT # Left flank : GGGATATAGATGGGTATCCGCCGTTTTTGTGGAAGTGAGGGAGATTTATGCTTGTGCTGATTACATACGATGTGAATACGGAGGACGCTAAGGGAAAGAGCCGGCTGCGTAAGGTGGCAAAGCAGTGTGTGGATTATGGACAGAGGGTACAAAATTCGGTGTTTGAATGTGTTGTAGACCCGGGACAGTGTAAATTGCTGAAGAATCAGTTGTTGAAGATTGTGGATTTAGATAAGGATAGCTTGAGGTTCTATTATTTGGGGAATCAGTATCAGAGTAAAATAGAGCATTATGGTGCGAAGAAGACGGTTGAGCAGGAAGGTGTGCTGATTTTGTAGTTGCGAAGGGGGAGCATACATAAAATGCGGGGGTGGTTCGCACCGGAATGAAGGGAAGGGAGGAGGTAGGAATGAAGATAAAGTAGGGAAGGGAGGAGCGGGTTTTGTTAATAATAGATAAATATGGGTGAATATGATAGGGGAAATTTGTTTGTATTTGCG # Right flank : TCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGTGTGGGAGTGTGGATTGAAATTTTTACCGTGTACGACATATTATCAAACTGCCGGAAGTCACTCCCTGTGTGGGAGTGTGGATTGAAATCTGCCGATATCCTCATTGATCTCTTCCGCTGTATGTCACTCCCTGTGTGGGAGTGTGGATTGAAATGTTTACGTTGAACTCTTTACAAATCAAACT # Questionable array : NO Score: 8.91 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTGTGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCTTATGTGGGAGTGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 263867-264030 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE159726.1 Dorea sp. 5-2 acPFE-supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 263867 32 100.0 34 ................................ CTGCCGATATCCTCATTGATCTCTTCCGCTGTAT 263933 32 100.0 34 ................................ GTTTACGTTGAACTCTTTACAAATCAAACTTATT 263999 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 3 32 100.0 34 GTCACTCCCTGTGTGGGAGTGTGGATTGAAAT # Left flank : GTAATGCCGGCGCCTTGGTATGATTGAGCAGTCACTCCCTGTGTGGGAGTGTGGATTGAAATCATTAAGGCTGTGGGCTTATTACGGGAAAATCGCAGTCACTCCCTGTGTGGGAGTGTGGATTGAAATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCTGTGTGGGAGTGTGGATTGAAATTTTTACCGTGTACGACATATTATCAAACTGCCGGAA # Right flank : TTTTGATGTAACTATTTGCAGATTGTTCGTATACGGTAGATAGTGAGTACCTATACAAAACTGGAGCAAACCTGTATGATAGAAACAGATTTGCTCCAGTCTTTATTTCACTTCATTCTTACCAGGCTTCCGGCAGTTCTCCGGCAGGTTTGGTGACCAAGGGAGCAGGTCATCCAAAAAGCTGCGGTCGGGAACATCCAGATGTTTTGGGATCTCGGTAAGCAGATACTCAAAGTAATCATACGGTTTCAGATTGTTTGCTTTTGCGGTTTCCGCAATGCTGTAGATGATGGCGTTGGACTTTGCACCGGCAATGGTATCTATCATCACCCAGTTTTTCTTGCCGATGCAGAATCCGCGGATGGACTGTTCCGCAGCGTTATTGTCCATCGGCACTTCGCCATCGTCCAGGAACATTTTCAGGTATTTTTCCTGGTTTCCGTGAAGGCGGGGGTTCGTGGGGCGGTTGAGCTGCCGGAGCAGGAAACCGGAGCCTGTGC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTGTGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCTTATGTGGGAGTGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //