Array 1 58304-56355 **** Predicted by CRISPRDetect 2.4 *** >NZ_OBMO01000013.1 Alcanivorax xenomutans strain JC109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 58303 28 100.0 32 ............................ TCCCGCGGCAGCTCGACGTTATCCCGCATGAG 58243 28 100.0 32 ............................ ATAGGAAAACCCGACGCCCAGCCAGGGGTCGC 58183 28 100.0 32 ............................ GCCGGTTGCTCGTGACCGGCTCCGGCTGAGAG 58123 28 100.0 32 ............................ TTGTCGGCAGCGCTGGTGCCGCCCAGCCATGC 58063 28 100.0 32 ............................ GGGCTGTTTGAGCACAACACTAAAGCGGGGGT 58003 28 100.0 32 ............................ GGCTGATCGTGCCCAGGTTCGAGCATGACGCC 57943 28 100.0 32 ............................ TGATAGCGAATGGCCCGCTGGCTTATCTAGAG 57883 28 100.0 32 ............................ TGTCGCGGCCGTCCCACGGCGCTGACTCAATC 57823 28 100.0 32 ............................ GATATGTCGGCGCGAGAGACGTTGACGCAATC 57763 28 100.0 32 ............................ AGGTCCAGAGGGTCCAGAGTGGCGGCCAGGTC 57703 28 100.0 32 ............................ CTCCGGCAACGGCATCTTCAACCGTGACAATC 57643 28 100.0 32 ............................ AGCTCGCCGGTGATGTGAAGATCGTTCCAGTC 57583 28 100.0 32 ............................ ATCTACCGCGAAGCATTGGCGCGTATCGGACA 57523 28 100.0 32 ............................ ACACCCACGTGGCTTGAGGAACCGATAAGGAG 57463 28 100.0 32 ............................ AACGGATGACGTGATCCTGACGTTGGCCAGGA 57403 28 100.0 32 ............................ TGAGTCAGGTCCGTTTCATCGGACTTTGCCAT 57343 28 100.0 32 ............................ GGCGCCGGCAGGGTGATCGGACCGGAGGAGTT 57283 28 100.0 32 ............................ ACTGATTTCGGCAGGCGCGTCGGCTGAATGTG 57223 28 100.0 32 ............................ AGGAACGGGTAGCTCTTGTGTCTGGCGCGGAT 57163 28 100.0 32 ............................ TTCCAGCGCGCTGTTGTACAGGTCGGAGTCGT 57103 28 100.0 32 ............................ AGCTACGCGCAAACCGTCGTCTGAGCGAGCTT 57043 28 100.0 32 ............................ TCCGATGGGACGAGGTGGAACTATGCGTCCAG 56983 28 100.0 32 ............................ AAACGAGAAAACCGGCCACTTCCGGAGCGCTG 56923 28 100.0 32 ............................ AGGTGCTGGCTCGACGTGCCGAAAAGGCCAAG 56863 28 100.0 32 ............................ ATGAATGACGCCAGGGGCGTTTTGCCGCCGCC 56803 28 100.0 32 ............................ GCCCGGAACGGCAGGGCTGACATAGATGATCT 56743 28 100.0 32 ............................ GTCGATCGGCTAGGGGTAAGACACCTGGACGA 56683 28 100.0 32 ............................ AGGAAGGCAAACAGCACCAGTGCAATGACGGA 56623 28 96.4 32 ......................T..... TCCCGAAGCTCACCGGACAACAGTCGCACCAT 56563 28 96.4 32 ......................T..... AGCTGGTGACGTGGTGGTTCTCCGTCCTCGAT 56503 28 96.4 32 ......................T..... AGACCCGAGAGCTGCGTGAGCGGATGAAGACG 56443 28 100.0 32 ............................ AGGGTCCTGCGGATCGGTAGCGAGGGTGAGCC 56383 28 85.7 0 .............T......GG.....G | G [56359] ========== ====== ====== ====== ============================ ================================ ================== 33 28 99.2 32 GTTCGCTGCCGCGCAGGCAGCTAAGAAA # Left flank : CGGCTCTGGATCATTTAATGAGTCAAGATTGTCTGGCCGGCATGCGTGACCATATCCAAATGACAGGGTTGGCTCCGGTGCCAGGCAATGCCAAGCATCGTGTGGTCCAGCGCCGCCAATTCAAGACCAATGCGGAACGTCTCCGGCGTCGCCGGGCGCGGCGTCACGAGGAAACTCTGGAACAGGCTCGGGAGCGAATCCCAGACACGGTGGAGCGCAAGGTTGATTTACCCTACGTGACGCTGCGTAGCCAGAGCACGGGTCAGGACTTCTGCCTGTTTATAGAGCACGGTGACCTGCAGGCACACCCGGTTACGGGCCGCTTCAGCCGCTATGGCCTCAGCCCTACCGCAACGATACCGTGGTTCTGACCCTTTTTTTGATTCCAATTAATACTTTCCGAAAATCAATAACTTACGTCACGCTCCAAAATTTGGGGTGTGGCGCTTCTTTTTAGCCTTGTTCTTTAAAAATCAGGGAGTTAGATTCGTTTGGTTCTA # Right flank : TGCAGGCCATGTTTATTGATAGTCATAAAGATGTCTGCTTTTAAGCAGGGGGTGAGTCAGGGCGCCAGGGAGGGGCGATCCTGAAAGCATGAGTTAAGGCCGGTGTCATTGCCCTTGGACCGCTCCCACAAGACGATCTTGTGAGAGCAGTTAGGCAGAGTGCTTGATTAACGATACCGCGCCAGTTCCAGCCGGCCGATCTGGTTGCGGTGCACTTCGTCGGGGCCGTCGGCCAGGCGCAGCATGCGCGCGTTGGCGTAGGCTTTGGCGAGGCCGAAGTCGTTGGTGACGCCGCCGCCGCCGTGGGCCTGAATGGCCCAGTCGATGACACGGGCGGCCATATTGGGGGCGGCCACCTTGATCATGGCGATTTCCTTGCGCGCCACTTTGTTGCCGACGGTGTCCATCATATGGGCGGCGTTGAGCACCAGCAGCCGGGTCTGATCGATGAGTATGCGGGATTCGGCGATGCGTTCCAGGGTCACGGTTTGTTCCGCCAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTAAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //