Array 1 81091-82419 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVHO01000002.1 Ruminococcus sp. OM02-16LB OM02-16LB.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 81091 36 100.0 34 .................................... CTTCCGTAAGAGAACGGAGAAAGAGAAATCCAGT 81161 36 100.0 37 .................................... AAACCACAGACATTTAAAGAACAAATATGGGAATTTA 81234 36 100.0 39 .................................... AGTTAACAACCTTATAGCTTCATCTACGGACACAATTTT 81309 36 100.0 34 .................................... TCCTGTTGATGTTACTATACTACGTGACTCATAG 81379 36 100.0 35 .................................... CGGTAGATAGCGAATCTACATAATGTGTATACATT 81450 36 100.0 32 .................................... AAATGTCAGTGCTAAATTGTAAGCATGGTACT 81518 36 100.0 41 .................................... CTTTCCCCAGCGTGCCAACTCCAAGCTTTTTTGTTATTACA 81595 36 100.0 35 .................................... AAATATAAACAAGAGACAGACACAACTAATAAAAT 81666 36 100.0 35 .................................... TCTGAGTGTTTCGGTGGTGCAACATCAACTGAAGC 81737 36 100.0 36 .................................... TATAAAACGAGAACACTTAAAAGTCAGGGTTGCAGA 81809 36 100.0 34 .................................... TAACAGGAGGTAACACAATGAAAAATAATAACAC 81879 36 100.0 38 .................................... ATATAATCATCAAAGGAACGGAGGAAAGTAAAATGACG 81953 36 100.0 35 .................................... GTATGAGCCTGAAGTGTCAGGAAGATTTTATCAGT 82024 36 100.0 36 .................................... GATGTATGAATGAACGTACCATTGCAGTTCTGTAGG 82096 36 100.0 36 .................................... CTTTGCGGAAAGAGTTTTGTAGAATTCAGGGAAAAA 82168 36 100.0 36 .................................... GTGATATATATGTGACAGTTGTCAAGGTACAATTTC 82240 36 100.0 36 .................................... ATCACAAATTCCACTCCCATAGTTCCGCCTGTCATA 82312 36 100.0 36 .................................... ACTCCACCGAATGTCTTGTCGAATTCATCAAACATT 82384 36 88.9 0 ....T....C...................T.....T | ========== ====== ====== ====== ==================================== ========================================= ================== 19 36 99.4 36 ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Left flank : AAAAAGGAAGATATTTTGGAAGCAGTACAGTTATTTTATGAACAGTATTATCAGAATTTCCAGAAGAAATTTTCACGAAGTGACAGGAGAAAACCGAATACAGTATTTCTGGGAGGTGGAAGCGGTTTTGTTTCCAAGACAGTGATTTACCCGTTATTCGGAGAAAAAGAGGGCATTGAAACTGTAAAAAATATTTTTGACAGAACAAATGTGCCTAAAACCCATCAACATTATAAAGATACTCGTATAGGAGTATCCCCTCATATTTTAAAATGCACAAGATATCAGGGAAAAGAATATATGATGGGGGAATGTGAATTAAATATTATTTGAGCATTTTGTTCTTAAATGCGCGAAATTCTGTATTTTGCCACGCATGGCTTAAATATTGGATTTGTGAGAATTTTTTACTTTCCAAAACGGCTGCATTTCAATAAAATTACTTTTCCCCCGCAATCCCCCTATTCGTCCCAGACAGGACATGGGGTTGCGGAGATGGT # Right flank : TTCGTATTCAAATCTAGAAACAGTTACATTTGGCAATAAAGTGAATTGTTACTAGAGAAACAGAGGTGATATCATGAGTCTTTTATATGTAAATGACAGTGGTGCAACAATAGGAATAGAAGGTAACTGCTGTACCGTAAAACAAAAAGATGGTTCGAAACGAATGCTTCCTATAGAATCTCTGGATGGAATTACAATTATGGGGCAATCTCAGATGACGACACAGTGTGCAGAAGAATGTATGCAGAGAGGAATTCCTGTAAGTTACTTTTCAAAAGGAGGTAAATATTTTGGCAGATTAATCTCAACAGGTCATGTCAATGTAGAACGTCAGAGAAAACAATGTGCACTCTATGATACGGGTTTTGCTGTAGAACTTGCTATGAAAATTTTAAGTGCAAAAATTAAAAATCAAAGCGTAGTGCTGCGCAGGTATGAGAAAAGTAAAGGTTTAAATCTGGAAGAAGAACAAAAAATGTTAGCTATCTGCAGAAACAAAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 8985-9733 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVHO01000054.1 Ruminococcus sp. OM02-16LB OM02-16LB.Scaf54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 8985 30 100.0 36 .............................. TTATTTCTTTTATCTTTTTTGTTTCGCTTGTGTTCC 9051 30 100.0 35 .............................. GTAACAATGCTTCCTTCTGCATTGCCTGCAATAGA 9116 30 100.0 36 .............................. TCTGTTGTGTTGTCGTCGACTTCTACCGGGATCAGA 9182 30 100.0 34 .............................. TAGTTACTCTTATTTCGTCCGATTTGGGCGTTAA 9246 30 100.0 35 .............................. ATGAATATGCGAGACGGATGCATTATCGCATTCGG 9311 30 100.0 36 .............................. AAATTTGACAGCGACACAAACACATACACAGCAAAA 9377 30 100.0 35 .............................. ATTTCTGCATCTCCGCTCATTCTGTCGAAGTTTTC 9442 30 100.0 35 .............................. CAGGCAAACAATGTAGATATCAGTACGCCATTTGG 9507 30 100.0 35 .............................. ACACTTGCAAGTGAGATTATTTCCGACCTTGAGAA 9572 30 100.0 35 .............................. TAACTATATGTACGAGCAAGTTTCTTGGCACAATC 9637 30 100.0 36 .............................. GAGGTAGCGTTCGTTCACGCTCTTGATACCGAAGCA 9703 30 93.3 0 ........................A..T.. | T [9726] ========== ====== ====== ====== ============================== ==================================== ================== 12 30 99.4 35 ATTAAAGTAGAACCATATTGGAATGTAAAG # Left flank : TTTAAGTGAGACGATCATTCCTGAAACAGTATATGAAAAATATAAAGAAGAAATAGATACTATATCTCAGAAATTAAATTCAGAAAGATTAACTGCGATTGAAAGAAAATGTTTAAGAAGTAATATTTTGCAGTATTCGCTTGAAATTCCATATTATCACTGGAACTCTTATGAAAAGGCTATGAAAAAAGGATGTGTGCATCAATATCAATCAATTAATCTGAGTCCAGGCGAAAAAATTAAAGTTATGCAATGTCGATATGATGAAATGGGATATTATAAAATTGAATTTGTAGATGATGTAGATTAATAATGAAAAATTCTGTCGATGTTCGATAAAATAAAAATGCGAAGAGGTCGACAATGGTATGTAAATAAAGGGAATGAGTGGTTTTTTGATGAAAAACATGATAAAATGAATGGGAAAATAGAACAGATATAGTGAAGTCGACAAAAATGAGCAAATAAGCATAAAAAATATGCGGAACTGACAGCTATAG # Right flank : GATTCTTATGTTAAAATAGTTCTTTAATTGATACAAACGATTAATTTTATTTAAGCCAATACTTATATATCAATTCATAAAGAAAAAGGAGCTTTTAAATATACTATGGAGAAACTTGTTGTAGGTATCCTTGCGCACGTAGATGCCGGTAAGACTACGTTGTCGGAAGGGATTTTGTATTTGACTGGAAAGATTCGTAAGCTGGGGCGGGTGGATCATAAGGATGCTTATCTGGACACCTATAACCTGGAGCGGGAGCGCGGAATCACGATTTTTTCCAAACAGGCAGAGTTTGAACTGGGGAACAGGGGGATAACTCTTTTGGATACGCCGGGACATGTGGATTTCTCGGCAGAGATGGAGAGGACACTGCAGGTTCTGGATTATGCCATCCTTGTAATCAATGGAGCGGATGGTGTGCAGGGACATACCATGACCTTATGGAGACTTCTGACAAGATACCAGATCCCGACGTTCCTGTTTATCAATAAAATGGATCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAGTAGAACCATATTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //