Array 1 9601-12190 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIEB010000005.1 Sphingobium fontiphilum strain DSM 29348 Ga0373250_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9601 29 100.0 32 ............................. AGGACGAAGGTTTCGCTGTCCTCGCCCACGGT 9662 29 100.0 32 ............................. ACCATAAGCCGGTCTATCTCACCGCGTTCCAC 9723 29 100.0 32 ............................. TCGATGGCTGATTTCTCCTGCCGGAAAACGCC 9784 29 100.0 32 ............................. CAGTCAGGCATCGGGCGTTCCTTCGGTCGGTA 9845 29 100.0 32 ............................. ATAAGGGCATGTCATATGTGCCCGAACATCAC 9906 29 100.0 32 ............................. CGCTTCACGCTCAGCATCACTGTCTAAGGAGC 9967 29 100.0 32 ............................. GCCATCGGCACGGGGATCAGCGCGGCAAGCAC 10028 29 100.0 32 ............................. GCCCTGACCGTCGCTGGCGCGTTGATTTTGGA 10089 29 100.0 32 ............................. AACGGCGTCGTCGCTGTCGATCATCGCGCCTA 10150 29 100.0 32 ............................. CTGCCCGAACGATTCTTCGGCGGTGACCGGCA 10211 29 100.0 32 ............................. GCCCGATCAGGCGGCGCAGCTCGCCGCATACG 10272 29 100.0 32 ............................. GCCCTCACTGATTTGAACGGCGCACCATAGAC 10333 29 100.0 32 ............................. TGGAAGGATGGCGGCGCGCGCCCCAGGGCCAT 10394 29 100.0 32 ............................. TTGCGCAATTGGCTTTTGGAAAGCCATTCGCA 10455 29 100.0 31 ............................. CACCTCGACCGTATTCTGTTCCTCGTTGAAG 10515 29 100.0 32 ............................. CCCCGAAGCCCGCGCGCTGCTGACCGATTGCG 10576 29 100.0 32 ............................. GCCAAGGCGCGCGATTTCCGCAGCCAGACCGA 10637 29 100.0 32 ............................. GATATTCGCAATGAGCTTGATGTTGTGGATGA 10698 29 100.0 32 ............................. TGCGGCCATGGCTCGATGACAAGGAAGTGCAG 10759 29 100.0 32 ............................. TCATCCGTATCGGCGTGATCGCCTCGGTCGAT 10820 29 100.0 32 ............................. CCAACCCGCTGTTCGATGATGATCTGGGCTTT 10881 29 96.6 32 ............................G CATTCCAGCATCGCCCAGTAGCGATAATGGAC 10942 29 100.0 32 ............................. TGGGATCCAGAAAGCATCTGCGGAACACTGGG 11003 29 100.0 32 ............................. TGATCAGCAAGGGGCTGGCCGAACGGGGCATC 11064 29 100.0 32 ............................. CAATGCTGGATCGTCGCGGCGTCTGGCGTTGT 11125 29 100.0 32 ............................. AAGGCCACGCTCTACGCCGCGCATTTCCTCGG 11186 29 100.0 32 ............................. CTGTTTGTTGATGGCGTCGCCCTGTTCGACCC 11247 29 100.0 32 ............................. TATGCCCAGGCGCAGGCGCAGGCCGCTGCTGA 11308 29 100.0 32 ............................. CCGATCGTCGAACTCATCAACACGATCGAATT 11369 29 100.0 32 ............................. TCGCGCTGGGCTTCCTCACGCGGCGACAGAAC 11430 29 100.0 32 ............................. AACTTATCCACTGACCGACAGCGACGTGGCCG 11491 29 100.0 32 ............................. GCTTGCCAGACCGGCCGTGGCTTCTCCAGTTC 11552 29 100.0 32 ............................. CCCATGCCGGGCCGCGTCAGCGTGTCCGAAGG 11613 29 100.0 32 ............................. CTGGGTGCCATGGCGTCAGTCGCGGCGGCGAC 11674 29 100.0 32 ............................. AAGCAGGCGGAAATCAACATCCAGCCCGGCGA 11735 29 100.0 32 ............................. TTGACCTTGTCGCGGAAGATGTTCTCAGCGGA 11796 29 100.0 32 ............................. ATCGCGGGCCAGATCGATCACGACTGGAACGA 11857 29 96.6 32 ...................A......... AATACGCTGACCGACTGGAGCGGCGGCCTCAC 11918 29 100.0 32 ............................. ATGGCCGCCACTTTCGGCCCCATGTTGACGCC 11979 29 100.0 32 ............................. ATGGTCAGGTGCGCTTGAACCAGCGCGAGAGG 12040 29 96.6 32 ............................T TTCGTCCGCGCGATTGCCGACGCGGCCGAAGC 12101 29 100.0 32 ............................. AAGGCCACGCTCTACGCCGCGCATTTCCTCGG 12162 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.8 32 GGTTCCCCCGCACCCGCGGGGATAGTCCC # Left flank : CGATAGAGCGCGTCGTGCGTCGCCACGCGGCACAGTTGTTCCGTCAGCGGGAAGTCATTTCCGGCATGATCGACAGGATCAAGCAGCTGCTCGCGCCTGACGCTCAGGCCGATTGACGGTCCGATCGAAAGCCATGCCCCTTGTCGTCGTCATTACCCGCGATGTCGAAAGCCGGTACAGGGGCTTTCTCGGCTCGGCTATGCTGGAACTGGCCCCCGGAGTATATGCGCAACCGCGCATGTCGGCAGGCGTGCGCACGCGCATTGCGGACGTCCTGTCCGACTGGCACGGCCGCCTGCAACGCGGCAGTATCGTGATGTGCTGGGCCGAACCGAAAGCGCACGGCGGTCTCGGCCTGCAAACTTGGGGAACCCCGCCCCGGGACATCGTGACACACGATGCCATGCTGTTGGTGCGCCGCGCTTGCCAAAGCCCGAGAAACGGTGAAGATGCGAGGCAAACCGATCTTTCCAAGTGTTAATAATGCGTTAGAATGCAGA # Right flank : CAGGTGATCGCATACAAAGCCCATCTGGCAGCTCGTGCCCTCGCGAGCCAGTAAATGAAGCGGTGAGAGGGCCAGGCAGCGATCGCGGCGCATGAATCGACTAGGGATCTTTACTTCCCAGCCCCCTGACTTACCAGCCGAGGTGATTGCCAGGTGATTGCTACAGAATGACCTCAGCACCGCGGAGAGGTGCTCCGACATTCGTTAAGTCATTGATATCGTTTCTGGAGCGGGTAGCGGGGATCGAACCCGCATCACAAGCTTGGAAGGCTAGTGCTCTACCATTGAGCTATACCCGCGCGCCGATGGAGGAATTGCGCCCTGCCACGACAGGGCCGGGGCCGTCAACCGGGGAAATGCGAAGGCCGCCGCGCGGGCGGGCTTACTGGCCGAAGCCGCCCTCGCGCGCGATGGCGACGGCTTCGCGCGCGGCGGCGAGAAGCGCTCCGCTTTTCGCCTCGCATTCGCGCTGTTCATAGGCGGGGTCGCTGTCGGCGACG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCACCCGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //