Array 1 98249-94382 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILN01000004.1 Klebsiella pneumoniae strain TUM14140 sequence04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 98248 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 98189 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 98128 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 98067 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 98006 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 97945 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 97884 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 97823 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 97762 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 97701 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 97640 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 97579 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 97518 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 97457 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 97396 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 97335 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 97274 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 97213 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 97152 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 97091 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 97030 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 96969 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 96908 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 96847 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 96786 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 96725 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 96664 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 96603 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 96542 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 96481 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 96420 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 96359 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 96298 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 96237 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 96176 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 96115 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 96054 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95993 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95932 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95871 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95810 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95749 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95688 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 95627 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 95566 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 95505 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 95444 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 95383 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 95322 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 95261 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 95200 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 95139 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 95078 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 95017 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 94956 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 94895 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 94834 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 94773 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 94712 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94651 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94590 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94529 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94468 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 94410 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 64 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //