Array 1 22971-25269 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040759.1 Paracoccus liaowanqingii strain 2251 plasmid unnamed8, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================= ================== 22971 25 100.0 39 ......................... GACCCATGCCGCCAGCGCGACAGATGCGGCCATGTAGGC 23035 25 92.0 39 ...............A....C.... GACCGGATCAACTACGCCACCACCGACGCCGCCTTCGTC 23099 25 80.0 40 ...T.........G.T......A.T AATTTGGCTTCTTATCGAAGCACCCGTAGTTGTGGGCGTA 23164 24 88.0 40 .........T...C.-......... AACCCGGATCATCGAGGTAGCCGTCATAGACCGCCTTGAT 23228 25 92.0 39 ............T..A......... GACCGACTCGAACGCGGCCATGCAGGCCAACGAGACTCA 23292 24 80.0 39 ....C.......TC.-........T GACTGCTGCCGCCAGCGTCTACGCCCTTACGGGCTTGGT 23355 25 100.0 39 ......................... GATTTGGTATCTGCTTGCCGCAATCGTCTATTATATGGA G [23356] 23420 25 92.0 40 .......T.....G........... ACACGAAGTAGGCCTGGCGGGCGACGGGGCGCTGGCAAGG A [23442] 23486 25 100.0 40 ......................... ACTCTGCCAGCATTACTGGACGAGCGCCAATGGCACCCCG A [23508] 23552 25 100.0 39 ......................... ACCCCGTTCATCGACGCCCTGATCTCGGGGCTGGAGAAG A [23574] 23617 25 100.0 38 ......................... ACCAGGTTCGAGACCTGCATGACCTGAAGGCCCCCGGT A [23639] 23681 25 100.0 40 ......................... ACATGGTCGTCTCGCATATAGACCCTTCCATAGCTACGGC A [23704] 23747 25 100.0 39 ......................... ACGCCATCGGACGCTGACGCGGTCGTGCATGTCCCCGCC A [23769] 23812 25 100.0 40 ......................... ACCTGATGGCGGTCCTGCACGCCATGGGCCAGCCCAACAC A [23834] 23878 25 100.0 40 ......................... ACTCGATCAGGTCGTCCTGGTTGGGGTCGGGTCTGCCGAG A [23900] 23944 25 100.0 38 ......................... ACCACGTCCTCGACGGATTTCAGGCCTGCCTCGCCGCT A [23966] 24008 25 100.0 40 ......................... ACGCGTCCCGTTTTGCTGCGTTTCAGCCGCAGAAGGCCCC A [24031] 24074 25 100.0 40 ......................... ACTTGGGCTGATGCGTGACATTATCCGACAGACGGCAGTT A [24096] 24140 25 100.0 39 ......................... ACTCTATGCCGACCGGCATCTCGCCTCACCCACGAACAC A [24163] 24205 25 100.0 39 ......................... GACAGGGATCACCTGCGAGCCGTCATGCAGACGGATGTA 24269 25 100.0 40 ......................... GACGTTCCGTCGAGCACACGACGTTGCCGTCCTCGGTCTC 24334 25 96.0 41 ..........T.............. GACCCGGTTGCGAGAATGACCATGATGAGCCTCCAGTTCGT 24400 25 96.0 40 ...........A............. GACCATCCATTCCTCGCTACATTCCGGCCCGCAAGCCTCT 24465 25 100.0 40 ......................... GACTCAAGCTGGCGGATCTCTGGGAAGAGAAGCTGGACAT 24530 25 88.0 39 ..................A.CT... ACTTAGCTTCCAGACCGGTGGCAAGATGATGAAGTTCCA 24594 25 92.0 40 ......................CA. AACTCAAATCCATGAAGTTAACATGGCTGTGGGCTTCTTC 24659 25 96.0 40 .............G........... GACCGTCGCCATAGTAGATCCCGCGCGCCATGTTGTAGGC 24724 24 88.0 39 .....-.G....T............ ACTGGCGGCCCAATGCTCGCGGGCGCCCTCCGTCTTGGT T [24745] 24788 25 92.0 39 ....................G.T.. AACGCGCTCTTTCTCCAGATAGACTAGGTCCTGCCCCGG 24852 25 84.0 39 ...T......T...........T.T GGCGGGGTCTTCTAGCCCCTCCCAATCGGTGTGAGTGGT 24916 25 100.0 41 ......................... ACCAGATAGCGGCGGAACAGGTCGGTGCCCATGGGGACTGC T [24938] 24983 25 96.0 39 ..............C.......... GACGCGCAGTTGCTTGTTGACGCCTTCCAGTCCGGTCTT 25047 25 100.0 41 ......................... GACTCCGCTGCTGCGTCGTGCGGCAGATACATGCCGCCGAA 25113 25 96.0 41 ....................G.... GACCTAGCCTCTGACGGGCCTCTCAGCGAAGCTCTATGCAT 25179 25 96.0 40 ..............G.......... GACATGCCTTGAACTGAGTGGTTTCGCCCATTATGAGGGC 25244 25 96.0 0 ..........T.............. | T [25266] ========== ====== ====== ====== ========================= ========================================= ================== 36 25 95.6 40 CTCCTAACCCCTCATGGGGAACGGG # Left flank : CGCCAGGGCGCGCACGACCATGGCAATCCGCTCCGCCGAGGCCCCGACTTCCAGACGGATCACCACCGCGCCCGCGACGATCTCCGGCCGGGCCACGGCACCGACATCGGCCCGCGGCGCATCTTCAGCGGGGCCGAGCAACAGCGCCGCAAACTCCACCGGATCTTCAGGAGCAGGCAGCACCAGTCGCCCTTTCCGCGCCAGCGTCCGCCAAGAAGAGACATGGTTCGCCGGCACCCCGTGCCGCCGCGCAACGGTATTCACGGTCACGCCCGGCATCAGCGTCTCCGCCACAATCCGCGCCTTTACCTCATCCGGCCACTTCCGGTTCCGACGGCCTCGGCCGCCAGCCGGGAGAAGCTCCAATGCAGACTCCATGGAGAAACTCCGTCCCAACAATCATCACGATCCAATGAACCGATCAGAATGCCGCGCGGAAGGTGGGGGGCAGAGAACGCTTACCCTTGCAGGGCATCGGGCGCAACCTTGCCCAGTTCCTT # Right flank : GAGCCTTAATTTCCAACAATTTCAAAAAGCAATGTACCACGCTCAGGGGGAAGGCACCCGTTGCCTCAATAAAGACTATGTAGTCCCCTAGCCCGTACAGCAAGATCGAAGGATATCGTTGCTATTGACTGAATCGATGGTCCTTTCGACCGTTGGCACAATCCGGGTAAGCCGGATTAGCCGCTCGCCAATCTCCCGAGCAGTTCGGTGCTCCGCCCTAAGATGATCTTTTTCCGCTCTGCGCAAGATCGTTAGACAGCTTTCAACCAGACGGTCGGCCTCTAGAAGGGGTGTTTCCCCAACATGGGGAAGCAGGATCTCTTCGCGTCGGCGTACCCGCCGGTCATAGCTCAGGTCGCTCAAAGCCTGTTCAAGTGATGTGGAGATTGCCACTTCGATCCGACCGTCGTCGAGTGGCCTTGATGGCATGTTGGACAGCCGTTCATCCGAAGCCCAGATGTGCCATGGCACATTTCGGCGGTTTCCATCAGGATCGACAA # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCTAACCCCTCATGGGGAACGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //