Array 1 51574-53847 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHQVD010000015.1 Bacteroides uniformis strain MSK.20.32 NODE_25_length_117599_cov_83.198, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 51574 47 93.6 30 ....................GCT........................ AAGCCGTCCGCATCGTACAGTCTCACGGCA 51651 47 100.0 30 ............................................... ACAAGATTTAGTAAGGTACACCATCACGGG 51728 47 100.0 30 ............................................... TATCGTAGCGAAAGGAATAGTTACGAATCT 51805 47 100.0 30 ............................................... GTTTGTCATGCACGAAACCATTTTATTGCA 51882 47 100.0 30 ............................................... TTCCCTTGTAAATTCCTAATAATTAGTGTG 51959 47 100.0 30 ............................................... GCCTTGCAACCAGGCAATCAACCGTTATCT 52036 47 100.0 30 ............................................... TTGTCTGGTCGGGTTCATCAGCGCAAATGT 52113 47 100.0 29 ............................................... GCCAATATCTATTTCATCTACACGGGCTT 52189 47 100.0 30 ............................................... CGTACCTTTCGAGGAAAGAGATTTGACTCT 52266 47 100.0 28 ............................................... GTATCCCAAGTTGAATCTGCATTAATTC 52341 47 100.0 30 ............................................... AAAGAAGACGCAAAGGAACAGCATAAAAAT 52418 47 100.0 30 ............................................... ATTACGCTTTTCCTTATACTGAGCTTCACG 52495 47 100.0 29 ............................................... TATATGCTCAGATTGCTACGAATGATGTG 52571 47 100.0 30 ............................................... TTAAAGAACGGTCAACAATTCTTCTATCAG 52648 47 100.0 30 ............................................... AAGCAGAAGTTTCAACAGGTTGAGTACGGG 52725 47 100.0 30 ............................................... AAACAGGAAGAAGCTCACCAACTTTTGCAG 52802 47 100.0 30 ............................................... TCATTCCATAGACAATATTGTTCTCGTCCA 52879 47 100.0 29 ............................................... GACAAGAAAAGTTTTGAGAGGGATTATCC 52955 47 100.0 30 ............................................... TAATTGCACTTTTATTTGTTTATGTGGTAT 53032 47 100.0 30 ............................................... CATTCTCATCTACTATTACAGTGAGCTCCT 53109 47 100.0 30 ............................................... TGGAGAAGTGTTTAAGACTTCGTTTATCCG 53186 47 100.0 30 ............................................... CTTTTCAAAAGTAAATGTAACGTTCATGCT 53263 47 100.0 30 ............................................... CCAGTTACCAAACCAACCCCAATCATTATT 53340 47 100.0 30 ............................................... CTACGACCTTGTACGTGTACACAAGTTTGG 53417 47 100.0 29 ............................................... TGGTATCGGGGGTATCTATCCGAGTATGT 53493 47 100.0 30 ............................................... TATCCTACATGGGGCAAGAACAAACCACGG 53570 47 100.0 30 ............................................... GTAATCGTGCAAGACACGTTTGCCCAAATA 53647 47 100.0 30 ............................................... CCGGATTTCTTATTGTCTTTCTTCCAAGAC 53724 47 100.0 30 ............................................... GGGAGATGCTATCTCCAACCCAGCTTTCAT 53801 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.8 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCGTACTTATCGGATTCTTTCAGCCGGCTGATGCTGACGGGACCGAATATCTCGTCGGGTGTAGAGAATCGGGACATCAGGTATTCGAAGGCACGGGCATCTGTAAAAGCAGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGCCCCAGGAGCAGGATGCTCTCACCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : CTGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTATTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //