Array 1 71464-68680 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTPA01000018.1 Actinoplanes teichomyceticus strain CPCC 203265 Scaffold18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 71463 30 100.0 31 .............................. ACAGCGCGCAGCTGGGCGTCACGGTGGCCCG 71402 30 96.7 32 .............................T TCACCGTCCCGACCGAGCTGAAGGCCCGGCTG 71340 30 96.7 31 .............................C GGCGCATCGTGCGCCGGCCGACGGGCCCGGC 71279 30 100.0 31 .............................. GCTCGGCGAGGGCCTTGTGTATGGCGTCGAT 71218 30 96.7 31 .............................C TTCTTGACCAGGACGCCGACATGGACTTCGG 71157 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 71096 30 96.7 31 .............................A AGACGCCGTACGTCTGCAACTCGGGGCCGTG 71035 30 96.7 31 .............................A GCGCAGACGCGGCACGGGAGTTCCTGGACAA 70974 30 96.7 31 .............................C GGGACTTCTCGCACCTGGTCGGCGCGGAGCT 70913 30 96.7 31 .............................A GCGACGTGTGGCGTGCCACGTTCTAGATAAG 70852 30 100.0 31 .............................. GCACGCTCGCCGAGCGGATCACGGAGTGGTC 70791 30 96.7 31 .............................C TGAAGGAGAAGCTGGCCGGCTGGAAGTGGTC 70730 30 100.0 31 .............................. ACCGGGGCGTCGCGCGCAACATCGCGGGCAC 70669 30 96.7 31 .............................A GGCTGAGGTCGGCTCCGCACGGTCCGAGGTA 70608 30 96.7 31 .............................A AAAAGCTCGCGCCGAGCCGGGCGGCGGGGAC 70547 30 96.7 31 .............................C CGTTCGAGGCGGCAGCGAAGCGGTACGAGCA 70486 30 96.7 31 .............................C CGGGCGACACCCTCGCTGCGTTCACCCGGTG 70425 30 96.7 31 .............................T GGTGCTGACGGACGCTCTAGTGCGGGCCGGG 70364 30 96.7 31 .............................A GCCAGGCCCGGCCGGGCGGGAGTTGCTGCAG 70303 30 100.0 32 .............................. GCGCCAAGCGGCGGCCGCCGCGGTGGTCGAGA 70241 30 100.0 31 .............................. TTCCGCGGGCCGGTGGAAGCCGTGTTGTCGT 70180 30 96.7 31 .............................T GGGCCTGGACGTACGCCTCCAGGCCCTCATA 70119 30 96.7 31 .............................C ATTGCCTGGGTGCGGATCTCCTGGGACAGCC 70058 30 100.0 31 .............................. ATGACCGATCAGAAAGCCCCCGACGGTCCGA 69997 30 96.7 31 .............................A AGGACGCGATGGGTGAGTTCGAGGCTCACAT 69936 30 100.0 31 .............................. CGTCGGCCAGGTCCCCGACCGTCCGGAACGC 69875 30 96.7 31 .............................A CCACGCAGTACTGGAACCGGTCGGACTACAC 69814 30 96.7 31 .............................T GACGTTCGACCCTTACCCGAACGACACGCCT 69753 30 100.0 31 .............................. GGCGGGCGAACCGGGGGGCGTTGCGGCGCGG 69692 30 100.0 31 .............................. CGTACCGGGCACGCCACGGCCGGGCCCCGAT 69631 30 93.3 31 ............................TC GTGCGACGAGACGCAGCGATGACCAGGACTT 69570 30 96.7 31 .............................C AGGTGGGCTAGCACCGCCGAGATCGCGAAAA 69509 29 93.3 31 ........T............-........ CAATGCCACACGCCAACCCCGGGCCGCGGTC 69449 30 96.7 32 .............................T GCGCCGCCAGCTCCGGGTCGGCCATCGCGGTC 69387 30 96.7 31 .............................C CGAAGACGGCGAACACTCTGTACGCCCAGCT 69326 30 100.0 31 .............................. CCGGCCGAGGGTTGCCTACTGCTCCTCGTCG 69265 30 93.3 31 ....A........................T ACAAGTGGCTCATCATCGGCGGCGTGCTCGG 69204 30 100.0 31 .............................. ACATCCAGAAGGTCATGGGCTGATGAATCTG 69143 30 96.7 31 .............................C GATCAGCGTCCCGAACGGCGCGACTTTTCAG 69082 30 96.7 31 ..........T................... TCGTGCAGCGCAACGCAGCCGGGGAAGCCGC 69021 30 100.0 31 .............................. TCAACGCGGCGGCCGGGTGGTACGGGTCACC 68960 30 96.7 31 .............................T GGCGCAGCAGCGGCGACGGCACGATCTCCAT 68899 30 96.7 38 ............T................. GGCCGGCCGCGGACAGCTAGACATGCCCTGGGCCCCCG G [68877] 68830 30 93.3 31 ............A................T CCGCGCCGGCACCCGGGCCGCCGAGCCAGTC 68769 29 93.3 31 .....................-.......A AGGGGGACGGGACGATGTCCATGTCCTGGTA 68709 30 90.0 0 ..........G...........C......C | ========== ====== ====== ====== ============================== ====================================== ================== 46 30 97.1 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACGAGGTCAACCTCTGGGACGAAAGTGGAGCCGACATACCGGCTGGCTTCAACCACGGGTCCGAGTACGAGGTCGATTTCTGATGACCGTCATCATCTTGACCTCGTGCCCGCCCGGCCTGCGCGGGCACCTGACCCAATGGTTACTCGAGATTTCCGCCGGCGTATACATCGGCCACGTCAATCCACGCATCCGCCGACGACTTTGGCACCGCGTCATCGAACTGTCCGGACCCGGTCGAGCGCTACTGGTCTACCAGCAGCCCGGCGAGCAACGACTGACCTTCGAAACGCACGATCACGACTGGGAGCCGGTCGACTTCGACGGCATCACCCTGATGCGACGTCCGACCCAACGTAGCACCTACAACCCAGCAGCCCCCCAAGGATGGAGCAGCGCTAGTAAACGGCGACGCTTCGCACGCCGATCCCCGAACACCTCCACCACACGGACTGAACAAATTCCGCCAAGTTGACCTATAGAATCCCAGGTCAGGAAGT # Right flank : ATTAATGACGAGCAGGCAGTGACAGTTTCGGGAGGTCATTAGTCGGCTGCCGCTCATCAGCATGATGGAAGGCCCTCACTGGGCAGATCCGTAAACTCGATCATGGATCGGGCAATCCATCTCGACTACGGTCGGTGACTGTGAGTCTGGCGGTGTTCCGCTGATGAGGGAGCAGCGCGGTAGTAAGGAGGCCTTGTCTGGACTGTCTTTCGGCGGTCTTGTGCCTCCGCGCTGCTCCCCACGAGGTGTCTTGCCGAGGTTCTGCGGGGAGCAGGCCTTCCCGGTTCGGCTGGCCGTCGGGCATCGGCCGAGGTGTCGCCGGTGGGGGAGCAGCGGAGGTCTTCCCGGTGAGCGTGTTTGTGCTGCTCAGTATCTGTTCTTGTTGGTTGTGGGGAGCACCGTGGCGATGAATTCCGCGTTTCTGGTGGGGGTCGTGCGGCGCTGCTCCCCAATCCGGGTGATCGGTGGGGAGCAGGTGGGGTGGTTACTGGCAGTGCTAG # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.36, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 80966-84112 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTPA01000018.1 Actinoplanes teichomyceticus strain CPCC 203265 Scaffold18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 80966 30 100.0 31 .............................. GGTAGACCCGCAGATGGTCACGATGAACAGA 81027 30 96.7 31 .............................T GATCGAGGATGTTGCGGACGACGTGCAGCGC 81088 30 100.0 31 .............................. CGGTCAGCACCAGCGGCGCCGGCCAGGCGAG 81149 30 96.7 31 .............................A GGGCCAGGCACTCCACCGCCTCCGGTACCCA 81210 30 100.0 31 .............................. CAGCAACGGCACCTACACGCTGGCCACCAAG 81271 30 96.7 31 .............................T GCATCAGCGACACCGTCGGCGGCGTGCTCGG 81332 30 96.7 32 .............................C CCGGCCACGGCGAGCTGTCCATCCGGGCGCTG 81394 30 96.7 32 .............................A GCAGACCGTGGGCGGCCCTGGCTCGGGCGTAC 81456 30 96.7 31 .............................C CGTCCGCCAGGAAGTTGTGCGGATCGTCGGC 81517 30 96.7 31 .............................C ACGCCCTTGGGCGCCGGATCAGCTACAAGTA 81578 30 96.7 31 .............................A GTGGCTTACGGTGGTCCCGGCCTACGGTTGT 81639 30 100.0 31 .............................. CGGCAGCCAGTACGCCGATGAACGACATGAT 81700 30 96.7 31 .............................T GGCTCAGCAGGATGAACGGCTCGCAGCCAGA 81761 30 96.7 31 .............................T GTTTGGGATCGTTGATCCGGATCTTCATGCG 81822 30 100.0 31 .............................. AGCGGATCCTGTCCCCTAGAACACGGCAGTG 81883 30 96.7 32 .............................A GGCTCGCCGCGGTGTGCTCCCGCGGCTGTGGG 81945 30 100.0 31 .............................. GAGCGCTGATCGCGGTAGCAACGGAGGCGTA 82006 30 96.7 31 .............................A CCACGCTCAAGGACGTGCCCGGCGCGAACAT 82067 30 100.0 31 .............................. ACGCGCCGAGCATCGCGGTCGGGATGATGCG 82128 30 96.7 31 .............................T GAGAAACGGACGGGGCCGGCACGCCCATGCC 82189 30 96.7 31 .............................C TGCCCTGTTCGCCGGGGTTGATGTTGAACCT 82250 30 100.0 31 .............................. ACGATGCGGACGCTGGCGAGTGGGAGGACGA 82311 30 100.0 31 .............................. GCTGGTCGCGGACATGCAGCGCGATGCGGAG 82372 30 96.7 31 .............................C GCATCCCTCACCTCGGAGGTGTACTAGTGGG 82433 30 96.7 31 .............................C GGCCGGCGACGGCCCGCTCGTCGCGGGTTTC 82494 30 100.0 31 .............................. TCCCGCGGGCAAGACGCCAGATGCCGGACGC 82555 30 96.7 31 .............................A ACCGCACGAACCCGAGGGCAAGGAATCCTTC 82616 30 100.0 31 .............................. GGGTCGAGCAGGGTCGCCGGCCAGCGCACGA 82677 30 100.0 31 .............................. TCCGAGCCAGCGCTCCCGCTCGGACCTGCCC 82738 30 100.0 31 .............................. CGTTCGACTGCTCCGGGCTGATGCAGTGGAT 82799 30 96.7 31 .............................T ACCCCGGGGCGTTCACCGGCGCCCTGCACGT 82860 30 96.7 31 .............................T ACGTCGCGGGCGTGGCGGGCTGGTCGATTGA 82921 30 100.0 32 .............................. GACAGCAGCGCCGCGAGCAGAGCGGTGGTGCC 82983 30 100.0 31 .............................. GCACCACCGTCGACCTGTCCGGGATCGGGCT 83044 30 96.7 31 .............................A CGCTGATCCTCGGCATCGTCGGTGCTGCAGG 83105 30 100.0 33 .............................. GGCTTGGGCTGCGCGGGCAACCGAACCCCTGGT 83168 30 86.7 29 .CC.C........................C TGTTCGATAAACCGAACAGTCAGGAGATC 83227 30 100.0 31 .............................. CGGCCTTGTCGGTCACCGGGTTGTGGTAGGT 83288 30 96.7 31 .............................C GGTGGTCGACGGCCTTACGGCCGGAGTGACA 83349 30 96.7 31 .............................T CGACCCGGCGTCAGGCCCGGACGCCCCCCGT 83410 30 96.7 31 .............................A CGAGGTCGCCGGGGCGGGGGTCGGTGATGGG 83471 30 100.0 31 .............................. GGGTCGACTTTGAAGGGTCGATGACCGGCAA 83532 30 100.0 31 .............................. GGTTGGCCGCCGGGCAGTCCGGGCAGTCGTT 83593 30 96.7 32 .............................C GGATGATCCGGAAGATCACCGATCCGCAGGGC 83655 30 100.0 32 .............................. CCATGACGCGCCACCGGTACGACTGCCCGCCG 83717 30 96.7 31 .............................A CCCGTGACACCGCGCGCAGCTCGGCGATCAC 83778 30 96.7 31 .............................A TCAAGCAGGACGCGAAGAAGCGGATCGGCTA 83839 30 93.3 31 .............G...............C CGGGCACCGTCACCGCGGTCGCGGCGCCGGC 83900 30 96.7 31 .............................T GCGGGTCACCGGCGAGACTTTGAAACTCGTC 83961 30 96.7 31 .............................A GCTCGGCATCGTCATGTCGGTGCTGGAGATC 84022 30 93.3 31 ..........A..................C ACTGGTCGCGCACCCTCAACGGCGCCGGTCG 84083 30 93.3 0 .......T.....................C | ========== ====== ====== ====== ============================== ================================= ================== 52 30 97.6 31 GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : CCGGTGTGGCCTTGCCGATGTCGTGGACACCCGCCAACCATTGAACGAGAACCCGGCCATCCGCAGCACCTAAAGGCATCTCGTCGGCGATTCGCTGACGAACCGCCATGGGCAGCCACTCATCCCACAGCGACCCCGCAACCTCGGCCGCATCGGCAAGATGCCTCCACAACGGAAGCGGCTGCACCTGGTCCCCCGACTTACCCCAGACCGTCCGCGCTGCGGAACTCAATTCGGAAGCGATGTCCACGGCTGCGGATTCAAGCACGGAGGTATGACGGTTCCCCAGACGACCGAGGCGCGCCTTCTACCCGTATAAGCAAATAGTTACTTTCTGTCGGTATCGATACTTCTTCCAGGTGACGTAACATGCGTTGGTCTCAGGGGCAAGCTCGTCGGCGGTAGGAGGGAGGGGAGCCATCACGCCCTATGTCGCCTCTAACGGGAAACGAGTGAATAAAAACAACACTCAGGCACTACATTCCCGCAGGTCAGGAAGT # Right flank : CGGTACACCCGGGCGTGGCTCACGCCTCCGCCGTTTTTGGGCCACGACCGCCCGCCGGCCCCGGTGACCACGCCAGCCCCCGCGTCGACGCGTTCGGCACCACCACCGTCGCCATGTACCGCATCAGCGTCGACGCCGCCCTCGGCGACACCGGCACTGCCCTGCAGCACGCTGCCAGCGTCAACTCTGCTGCTCAATTTTTTTGGTCAGAGGATGGTCCACGCGGTGAGCTCGCGGCTCCCTCGCCGTAGGCCTGCAATACGGCGGTGCACCTCTGCCGCTGCCGGTGTGCCTGGCAAGGACTTGCGTGCATTGGTAGTAATCATCTGCAGCTCACGGAGCTGACACAGGTCCTCGAACTCAGCCCAGTGTCGAGGGTCCCAGCCGTAGGTTTGAACGAAGGCGTCGAATCCGTGATCATTGCCGAATCGGCGGCAGTGCACAGCTACCGTGGCGACATCCCAGACGCGGTCGCCGATGCGGGCGCCGTCCCAGTCCGC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //