Array 1 14085-16199 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPS010000022.1 Microcystis wesenbergii FACHB-1339 contig22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 14085 36 100.0 34 .................................... GAATTACTTGCCAAAATCTCAAGGGGTAGATATT 14155 36 100.0 37 .................................... AAATCCGAAAAAAGATTATCTCTAAGGAATTTTTAGA 14228 36 100.0 34 .................................... TTAAATAATTTTAACAAACATAAAAGTTATTTAT 14298 36 100.0 35 .................................... GTAAAATTCCCAACTGTGAATTACCTGAGATCGAA 14369 36 100.0 35 .................................... TTCTATTAGAGCTAGGGCATGAATCATTTAAAGAT 14440 36 100.0 36 .................................... TCGAATTGCGTGCCGTCCGTGATTGTTTGATAGCCA 14512 36 100.0 34 .................................... ACATTGTGGATAGCCTATCGGGAGCGTTCTATTC 14582 36 100.0 34 .................................... ATTTTTACCATCGATGACCTCTCTTTTTTCGCAC 14652 36 100.0 34 .................................... ATAACCGTGCCAACAGGAAACTTTTTGATGGGTA 14722 36 100.0 37 .................................... AAACAATTTACTGAGTTTTATCCTTCCTTAGTAAAGT 14795 36 100.0 34 .................................... AGTGTACCTCCTGTAATGACTGCACAGATAGCGC 14865 36 100.0 36 .................................... GGAAATACTGGATGGTCTCCTATTTTTTCCCTAGTT 14937 36 100.0 36 .................................... TTTAAATCGATATGAGAAAAGATTTTAGGAATATTA 15009 36 100.0 35 .................................... AATCAGTCGAATTGCGTCACGCCGATCCATGTAGT 15080 36 100.0 35 .................................... ATTTTACTGACTCTTTTAGCCGCTTATTTTCTTGT 15151 36 100.0 36 .................................... AGGCTTAAGCTTAATTGTTTCTCATCTTTCCAAAAC 15223 36 100.0 36 .................................... AAAGATGAGTTGCGAAAAGAATTAGAAAGAAATCCT 15295 36 100.0 37 .................................... GGAAAAAGTTATTGATTTTGTAGAGAGATTAACTTAA 15368 36 100.0 36 .................................... ACTAACAGTTCTCCTTTTATGACTACACGGCAGCGA 15440 36 100.0 37 .................................... TTTGGAGCTTGGCTAGTTGTTAAATTGTAATTAAATT 15513 36 100.0 37 .................................... TCTCCTAAATCAGAAGACGCTTGTTCTTTGGCAATTA 15586 36 100.0 36 .................................... CGATTTTTTCTCAATATTCTATCGACAATTCTAATC 15658 36 100.0 35 .................................... ATCTATGACGCGTTGATTTACTCGTTACCTCGCGT 15729 36 100.0 35 .................................... AATTAAGAATACCTTTAGTAATTGATACAGAATAT 15800 36 100.0 37 .................................... TACGTTGCCAAGTCTAGAGAAGCTTTTGAAGAGGGAA 15873 36 100.0 36 .................................... AATCACCTCACTCATCCCTCACCTCCCCGGCAAATA 15945 36 100.0 36 .................................... AAGTTAAAATGATTGGTAGCTATCCACTTGACTACA 16017 36 100.0 36 .................................... AGTCCATAGGGGTTTTATTTAGGTTTAGGTATTTTT 16089 36 100.0 39 .................................... GAAATCGCGGGCCTCAAGGGCTAAAAGGAGAAAAAGGAG 16164 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 30 36 100.0 36 GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GTCCGCAACGCTGGCGTAAAGCTTACAAAATTTTAGGCGGTTACGGCGATCGCATTCAATACTCGATTTTTCGCTGTTGGTTAAGTGCGCGAATGCGAGAAAAATTGCGCTGGGAATTGGAAAAAGTCCTCACCCTAAAAGACGACTTAATTTTAATTCGTCTGTCGGAGCAGTGTGTGCGCGATCTGCCTAAGTACAACCGACCTGACACATGGCTTTTGGACGAAAAAGGGTTTCGGGTAATCTAAAAAAAACAAGCATCTCTGGCTGGGAAAAAATCCACGGGCTAAAATTTATTTGTATTGCTAATGCTGTCTCGGTTTCAGGGTTTGACAAGGAACAATTCCTGCTTGCATTTTTTGAAAGTCGCACTGGATAACGGTTTTCAGATTCGGTGCTGTCACTCAAAAGCTCTGATCAGAAGATTTCTTGGCGTTTTTCTAGAGGTGCTTGTAAAATGGACTGCGAAGCTATACACCAAAGGCTTTTTCAGCCTCGCC # Right flank : CTCGGATATTTAAGCTTTAAGATAGACAAAAATGGAAAGATCATGGCCAGTAAACGATCGCTTTTTAGAACTCCGTTGTCGCTGGTTGACCCTGATCGGGGAACACCTGCAAGACGATCGAGGACAACTATTAGAATACTGGCGGGTTGAAAAAGCTGATTCCGTCATCGTTCTGCCCGTTCAAAACTCGATGATACTGCTGCCCGCTCCCAGTTATCGCCCCGGACTGGGACAAATAACCCTTGATTTCCCCGGTGGTCGGATTTCCGAGAAGCAAGACCATCACGAGGCGGCGTTGATGACTCTAAAACGAGAATTAGGAATTGAAGCGACGGCAGTGACCCGATTAACTCCCCTAAATAGCGAGGGTTGGGCAGTCAATAGCTCCTTTTCCAATCAGAAACTCTACGGTTTTACTGCCGATATCGACGGCGGGCTATCTACCAGCGAACTATTGACCTATCCCGCTAATTCAATCGGAGTCAATGATTTGTTGAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 1285-1614 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPS010000490.1 Microcystis wesenbergii FACHB-1339 contig490, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 1285 36 97.2 36 ...................T................ CATCTGTTTATTGGGTAATTGTTGATTAATGGCTTT 1357 36 100.0 41 .................................... ATTTGAAGCTATCTTTATCTTCAATCATACTACCCATAGGA 1434 36 100.0 37 .................................... CACTTAGAATCCCACCGACGTTTAGATTCGATCCACC 1507 35 94.4 37 ...-.......................C........ ACATATCCCTTTAGAATTAATAAAGATAATTGTTTTA 1579 36 83.3 0 ..C...............TA......A...A....A | ========== ====== ====== ====== ==================================== ========================================= ================== 5 36 95.0 38 GTTCCCACTCGCTGGGGACCTTAATTGAATGGAAAC # Left flank : TTTAATTCATTGTGAGGTTCTAAAATTATGCAACTAATCAAATACACTACAGCGATCGCAATTTCTTGTCTACCTATATTCACAACACCTGTATTAGCTCAAAATAAACAAGAAAAGTGGGTAGATTTTGGTCAAACTAATAACGGTGAAATCATAAAATTAAATGAGCGTAGTGTCAAATTTGAAATTATGTTAGCTGACGATACTCTCAATAATGAAGATGGATTTTATAGCGAGAATGATACATACCCAAAGGTAAAAGTTGTTATCTTTGAATACAGTATTGGTGGCAGAACAAGAAATGCTTATACCAAGTCCTGTAATCATGGTAAATTAAGTGCTAATCCTAGCTGGAAAACCTACACTACTTTTATAGATTATTGGCCTCAATATTTTCTAGTTCCCGCTGATAGTATTGCTAGTCAGAATATGTTGCGACGAGTTTGTACTTTAAGTCTATCTAATCAGTAATCCTTTTTGATTATTTGAAGAAATGTAAA # Right flank : AGCCGTAATCGGGAGTTAGTATATGCAAGCAATCCTTTGAAGCCGTGAAGAAGTTGCTCAACGTGCGGAGAAACTGTACGAAAGCAGAATCCGCCAAGAGGTGGAAGTTGAAGAAAACATTGGCAAGATGGTCATCATTGACATTGAAACAGGTGACTACAAAGTTGATGAAAATGGCTTACACGCTGCTGACTTATTGAGCGAGAAACACCCCCATGCTCGGCTCTTTGGGATCAAAATTGGCTACAACGTTGCTGCCGCTTTTGGTGGGGGTATCAGGTCGCGTGTAGTTAAGTGATTTCAGGTATTGTGGCTAATGGACACCCGCTCATCACTATCCCATTTCGGATTCCAAATCGCGCTGACTTTCCGATTGAGTTTGTAGTAGATACAGGATTTACAGATGAGCTTTGTTTACCACCCGAAGCAGTAGCATTACTGAATCTTCCTTTCAGGTACGATATGCGTGCGAATTTAGCAGACAACAGCCAAGTAATGCT # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCACTCGCTGGGGACCTTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.50,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 5711-6427 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPS010000069.1 Microcystis wesenbergii FACHB-1339 contig69, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================== ================== 5711 36 100.0 37 .................................... ATTGGATGCTAACATGGCTTAGACCTGATAAGGGTTG 5784 36 100.0 37 .................................... TTTTGAACGTTTGTACTACGTCTTTGTTTGTAGCGTT 5857 36 100.0 38 .................................... TCTTTTATTTCTTTTGGTTGATCAACTATCGAGGCTAA 5931 36 100.0 35 .................................... CTGACCATTATTTGTCCATATAATTCGACAAGACA 6002 36 100.0 38 .................................... CTTTCGGCCAATCGGCGGAGGATTCGAGCGAAATATGT 6076 36 100.0 38 .................................... TCAATATGCGTGACGACAATATCTTCAGAATTAGTCAA 6150 36 100.0 34 .................................... GCCTTTGCTCCCGACCAAGACCAATCAGCATTAC 6220 36 91.7 41 ............CTT..................... CTCCAATGTATTGATTAGGTATTTTAGCAAAGCAAATTTTT A [6232] 6298 36 88.9 56 ............CTT....................A TTATTGTAGGGCTAATTCATGAATTAGCCCTACAATTCAATTAAAGCCATTTTCCT A [6310] 6391 36 88.9 0 A...........CTT..................... | G [6402] ========== ====== ====== ====== ==================================== ======================================================== ================== 10 36 97.0 39 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : TACTTCTGTTAATGCGTTGTGATCTTTCCCCGAATGGTAATTTTCCGAGGGATCGAGGGTTTGATAACCGACTCCGGGGTGTCGGACGAGGGTGGCGATCAGGAGCATAAGTCGCTGGAACTCGCGACTATCTCGTTCACGCAGTGTTCTTTCCCTAGAGGATTTGGGGTGCTGAGTCATACAGATGCAATCGGTTCAGTCAAGGGGAAAGCCGATATAAATTTACTTCACTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATCAGCCGCTCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTGGCGACCGACAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACGGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CGTGAAACCTTTGCCTCAGCGTGCATCTGCCTCCGGATACGGGCAAAGGTCTTGATGCAACGCAAACCTGTTATAATAATCAACCAGATGGGAGCCGTGACTGCGTGCGTAGATATCTAGGGCTTTGGGGTGGGAAAACTGGAATGACAACTGACTTTATCGAGATGTACGAAAATGCTTTACCCCCCCAATTGTGCGAAGAGATCAGGCATCGTTTCGAAGCCAGCGATCGCAAGTCAGATGGACGGATCGGTCATGGAGTCGACAAATCCAAGAAGAACAGCACCGACATCACCATCACAGGCCTCTCCGAGTGGAGCGATTTGCACAGTCAGATACTCGACAGCACACTGCGTCACCTGATGTTGTACATTCGCAAGTATCCATACCTGATCACCAGTGCGTTTGCATTAAGCTTGCAAGATCCGGCTACCGGACTGCTCAGACCCTTAACAGCTGCGGATGTTGGGGCGGCATCAGACCCGGAACTCGCCGAGTAC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //