Array 1 1261933-1260974 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KL402718.1 Lactobacillus paragasseri K7 LK7_scaffold1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1261932	    36	 100.0	    30	....................................	TAAGTGAAAGCCCTGTTGTTACTCCAACTA	
   1261866	    36	 100.0	    30	....................................	TCCCAGCGGATGCGGTTGATTTAGATTTAA	
   1261800	    36	 100.0	    30	....................................	GAGCTGAATATCAAATGGAATTAGGCAAGA	
   1261734	    36	 100.0	    30	....................................	GAATGAATAAGATATGGAGTGAAGATGACA	
   1261668	    36	 100.0	    30	....................................	ACGAAGCACCTAACCCTTGAATAAAGCGTA	
   1261602	    36	 100.0	    30	....................................	GAGCTCTTAAATAAAGTGGTTGATCGCACG	
   1261536	    36	 100.0	    29	....................................	CAAAAATCTTTCATCAAGTGTACTGGCAA 	
   1261471	    36	 100.0	    29	....................................	CAAAGATTAAACAGATAGTAGGTGATTAG 	
   1261406	    36	 100.0	    30	....................................	TATCGCATTATTCATCGTATCCATACCCGT	
   1261340	    36	 100.0	    30	....................................	TATCGCATTATTCATCGTATCCATACCCGT	
   1261274	    36	 100.0	    30	....................................	TATCGCATTATTCATCGTATCCATACCCGT	
   1261208	    36	 100.0	    30	....................................	TATCGTCGGTACGAGTTGTAATGCTGAATA	
   1261142	    36	 100.0	    30	....................................	TTTGCATAATTAATGAAATCAGCGACAACA	
   1261076	    36	  97.2	    30	............................T.......	AGTTAATCAAAGAAGGCGGACAAAAAGGCG	
   1261010	    35	  91.7	     0	..........................A.T....-..	|                             	TA [1260980]
==========	======	======	======	====================================	==============================	==================
        15	    36	  99.3	    30	GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC	                              	       

# Left flank :   AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGTGCTTAATGAAGCAGATCGTAATGAAATATTAAAAACGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGTTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTGATTAAAAACTGATTATAAAATTTCG
# Right flank :  GTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGGATAATTTAAAAATGACTAAGAATGTTTTTTTGGTATGTGGTTCAGGTGCAGCATCAGATTTTATGGCTGCTCACATGAGAAAAACATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTAATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTTTATTTT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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