Array 1 1261933-1260974 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL402718.1 Lactobacillus paragasseri K7 LK7_scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1261932 36 100.0 30 .................................... TAAGTGAAAGCCCTGTTGTTACTCCAACTA 1261866 36 100.0 30 .................................... TCCCAGCGGATGCGGTTGATTTAGATTTAA 1261800 36 100.0 30 .................................... GAGCTGAATATCAAATGGAATTAGGCAAGA 1261734 36 100.0 30 .................................... GAATGAATAAGATATGGAGTGAAGATGACA 1261668 36 100.0 30 .................................... ACGAAGCACCTAACCCTTGAATAAAGCGTA 1261602 36 100.0 30 .................................... GAGCTCTTAAATAAAGTGGTTGATCGCACG 1261536 36 100.0 29 .................................... CAAAAATCTTTCATCAAGTGTACTGGCAA 1261471 36 100.0 29 .................................... CAAAGATTAAACAGATAGTAGGTGATTAG 1261406 36 100.0 30 .................................... TATCGCATTATTCATCGTATCCATACCCGT 1261340 36 100.0 30 .................................... TATCGCATTATTCATCGTATCCATACCCGT 1261274 36 100.0 30 .................................... TATCGCATTATTCATCGTATCCATACCCGT 1261208 36 100.0 30 .................................... TATCGTCGGTACGAGTTGTAATGCTGAATA 1261142 36 100.0 30 .................................... TTTGCATAATTAATGAAATCAGCGACAACA 1261076 36 97.2 30 ............................T....... AGTTAATCAAAGAAGGCGGACAAAAAGGCG 1261010 35 91.7 0 ..........................A.T....-.. | TA [1260980] ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.3 30 GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Left flank : AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGTGCTTAATGAAGCAGATCGTAATGAAATATTAAAAACGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGTTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTGATTAAAAACTGATTATAAAATTTCG # Right flank : GTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGGATAATTTAAAAATGACTAAGAATGTTTTTTTGGTATGTGGTTCAGGTGCAGCATCAGATTTTATGGCTGCTCACATGAGAAAAACATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTAATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTTTATTTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //