Array 1 31000-34735 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVAG01000128.1 Chryseobacterium mucoviscidosis strain VT16-26 NODE_1_length_600494_cov_234.732_ID_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 31000 47 78.7 30 TCCTGC.GCG.A................................... TCTAATTAACGAACAGCCTTTAGGAACTGG 31077 47 100.0 30 ............................................... CATTGACACCACTATGTCAATGGTAAATAA 31154 47 100.0 30 ............................................... CAACAATTGCAAATGTCCTATTCACATTGA 31231 47 100.0 30 ............................................... CTGCCTGCGGTTGGTGAGAATGATATTTCT 31308 47 100.0 30 ............................................... TACTCAGTCTAATATTAATGCTGATACTGC 31385 47 100.0 30 ............................................... GTGAGATATTCAACCCATCTCTGAGGGGCA 31462 47 100.0 30 ............................................... TTGCCAATCCGAATGCTGTAATGTATTCTC 31539 47 100.0 30 ............................................... TTCCGTTAATTCTGGAACTGAATGGCATTA 31616 47 100.0 30 ............................................... ACTCTATACGTTTTATCAAATGGGACTATA 31693 47 100.0 30 ............................................... GGAACTGTTTGCTTTCCATTCCATCCGTCA 31770 47 100.0 30 ............................................... ACTTACAGAGGCGCAGTTAGAGGCAGCGCG 31847 47 100.0 30 ............................................... GATTTAAAGAAAAACGAGTATAAAAACCAT 31924 47 100.0 30 ............................................... GACTTGCAGGGAGGAAAGCGAAGAAAGCGA 32001 47 100.0 30 ............................................... GTGATATGCTTATGACTGAGATCGAAAGAA 32078 47 100.0 30 ............................................... TCTCTACATTCGTAGCACTTACCACAAGGA 32155 47 100.0 30 ............................................... AATAGTACCAGTGATAACTGTTTTCATACA 32232 47 100.0 30 ............................................... TAAAAATATAATGTATAATCGGCAGTTCTA 32309 47 100.0 29 ............................................... TCTAAATTTTGTGCTGCTAATTGTCCTCC 32385 47 100.0 30 ............................................... AGATGATCCTGTTACGAGTCTACACGAACA 32462 47 100.0 30 ............................................... TAGCCCATCTACACCCTCTTTAACATTTCC 32539 47 100.0 30 ............................................... AGGATCTCAGAGAGGCATAGGAGATATGGC 32616 47 100.0 30 ............................................... AATTCTTTTTCCCGTTTGAGGTTAATATTG 32693 47 100.0 30 ............................................... TATAACGAGAGCCGCACTTCATACATTCAG 32770 47 100.0 30 ............................................... TCTATAGAATAATATACTGCAGCTTTCTGA 32847 47 100.0 30 ............................................... AATTCCGTAGTTTAATCGATTATTATATTG 32924 47 100.0 30 ............................................... GTTTGATACTGAAGATATCAACCTCTCACT 33001 47 100.0 30 ............................................... ATAATGCTCAGGGCATGAAGATGTAATAAG 33078 47 100.0 29 ............................................... GGAATACCTGAATATAATTTGCATTATAT 33154 47 100.0 30 ............................................... GCAAAACATAGATAGGATGCGGCATCGGAT 33231 47 100.0 30 ............................................... TTGCTTTGATAATATCCACACAGAAAGCGT 33308 47 100.0 30 ............................................... ATAATGTGGTAAGACCATTACTTGCTGCTG 33385 47 100.0 30 ............................................... AAGCTTCGGAAAGAAAATAAAATACAATTA 33462 47 100.0 30 ............................................... TAAATCAGTAGATTCTTCTACGTTAGCTCC 33539 47 100.0 30 ............................................... AATAAATTGTGTGATTACAATAGCACACAT 33616 47 100.0 30 ............................................... ATTCCTTTAACGGGTACGTACTCCATTCCT 33693 47 100.0 29 ............................................... AAAGCTGTTAATATCTATTATTGGATTAG 33769 47 100.0 30 ............................................... ATCAATTAATTCACGCCCTTCTATGAATGA 33846 47 100.0 30 ............................................... TTCTCCATCAATCCTGATGGTAAGTCCGTC 33923 47 100.0 26 ............................................... AAGGTAGAAATTCTTTTAAATTTGTA 33996 47 100.0 30 ............................................... AACATATAATGCCGTTATTAGTTCCATATC 34073 47 100.0 30 ............................................... CGTGTGCATTCAGGGGAATAGGGTTATTGA 34150 47 100.0 30 ............................................... TAACTTGGAAATTTTTTAATTCTAATCTTT 34227 47 100.0 30 ............................................... CATTCTACCAAGGTGGGAACAAAGAAAGCC 34304 47 100.0 30 ............................................... CGCGTATTCCAAACTTCATACCCTCCGTTG 34381 47 100.0 30 ............................................... AAGAGCAATTAACTGGAGGGCTTTATAATG 34458 47 100.0 30 ............................................... AACCAATAATTGGAATTGTTGAAAAGCCCT 34535 47 100.0 30 ............................................... CTCACATAGGAAATTCCATTTGCATACACC 34612 47 100.0 30 ............................................... TTATGGCAATCATAGAAACACAGGCAAAGG 34689 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 49 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Left flank : TTTGGCACAAACTCAGGGGAATACAAAATCTCAGGTTTTAGCGGATGCACTGGACGAAGCTAATGCTAAATTCCTGGCTACCGATAAATCTCCTGCAAGAAAAGTGGGACAAATCGATAACAGAGGTTCTCACTTCTATCTGGCAATGTATTGGGCGGAAGCTTTGGCAAACCAGACTGCTGATGCAGAATTAGCAGCACAATTCGCTCCGATTGCAGAGGCGATGAAGGAAAACGAAGAAGTGATTAATGCAGAATTAATTGGTGCTCAGGGAAAACCTCAGGATATTGACGGTTACTATAGAACAGATACTTACAAGACGTATGCTGCCATGAGACCAAGTACGGTTTTAAATGAAATCATCGACGGAATTTAATTTCGTTTTTACTAAAATATTTTTTAGCCATAGCCGACTGTAGTTCGGTTATGGCTAATTTTTTATAGTCTGTAAAATCAGCCTAACTTAATCAAACGCTGTTCACCGAATCCGCCCACGCTTT # Right flank : CCTCAAAAAATAATCTACTGGTTTTCAGTAGATTATTTTTGTTTTCAGGATTTAAAATTCAGAACAATTCGAGCTGTTGGAAAGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATGTCTCCAAACTGTTTATCGGTAATGCACATAATGGCAACCTTTCCGGCTTTCGGAAGCATAAATTTCACTCTTTTGATGTGTACTTCTGCATTTTCACGGCTCGGACAATGACGCACATACATCGAAAACTGAAATAAAGTAAATCCGTCATCAATCAAAGCTTTCCGAAAACGGTTTGCATCTTTCATATTTGCTTTCGTTTCGGTCGGGAGGTCATATAATACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTGTTTGTTTATTGTAATAATCGCAGCCCGACCTGAGTGGAGCCCTTCGGCTTCGCTCAGGATAAACTACAGGCGGATAAAGCTACCATAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.90,-2.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //