Array 1 33057-34211 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NUTM01000055.1 Bacillus pseudomycoides strain AFS037117 AFS037117_98_E2_Contig55_140514, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     33057	    32	 100.0	    35	................................	ACTAATGTTATTATTCAAAAGCTGGACGTACGCTT 	
     33124	    32	 100.0	    34	................................	ACTTACACCCATTCTTCTCCCCCTTATTTTTCTA  	
     33190	    32	 100.0	    34	................................	ACTTCCTTTCTATCTGCTCATTACACAGCTTACG  	
     33256	    32	 100.0	    34	................................	TTTTTTCCTTCGGAAGTCGATGCGGTTTATGTTC  	
     33322	    32	 100.0	    35	................................	TTGTCTAGATTTGAACATACAAGAAACACCTCACA 	
     33389	    32	 100.0	    36	................................	ATTTAGCATCACCCAACTAAATTATAGCATTTTTGG	
     33457	    32	 100.0	    33	................................	AGATACAGTGTGTCAAGCAGCCTTAAATATTTT   	
     33522	    32	 100.0	    34	................................	AACATATTACCTACTGGAGCGATTGGTATAGCCG  	
     33588	    32	 100.0	    34	................................	ATTAAAGAGGTCAAAGTGGGCAGAGTCTTAGCTG  	
     33654	    32	 100.0	    34	................................	GGGTCAATATAAAGTATCCTTACATCTAAAAATG  	
     33720	    32	 100.0	    34	................................	AATTGAAGAAGAGTTAGAAGAACCTGTCGAAGTG  	
     33786	    32	 100.0	    34	................................	TCTGGAGCTGTTACCGAGTTTTTTTTTTACATCT  	
     33852	    32	 100.0	    34	................................	ACCTGTAGGTTTTTGAGCATTTCGCTGTAATTTT  	
     33918	    32	 100.0	    34	................................	ACTTCTTTTACAGTGTATGTACCGATTTCTAAAT  	
     33984	    32	 100.0	    33	................................	GCTAAGTGGGCTTGGGGGTTACAATCTAATCCA   	
     34049	    32	 100.0	    33	................................	TTGAATTAAGGATTGCAAAGATGAATTGTTATT   	
     34114	    32	  96.9	    34	...................T............	ATTAAGACAAGCGGATTTAGCTCATGATCTAAAT  	
     34180	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
        18	    32	  99.8	    34	GTCGCACCTCTTATAGGTGCGTGGATTGAAAT	                                    	       

# Left flank :   TAGATGAGTATCCACCATTTTTATGGAAGTAGGTGTAACATTTGCTAGTATTAATTACGTATGATGTAAGCACTATTAGCGGTGCAGGACAAAAAAGACTGCGAAAAGTTTCAAAAGTATGTCAAAATTATGGTCAACGAGTCCAAAATTCAGTGTTTGAATGTGTTGTAGATGCAACTCAATTTGCTACTTTAAAGATGGAACTAGTTAAAATTATTGATGAAAGTGAGGATAGTCTCAGATTTTATCAGTTAGGTAACAACTATAAAAGTAAGGTCGAACATATTGGTGTAAAAGAATCAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAACGTATAGCATACATAAAATCTCTAGTACATTCGCACCTAAATTTTCATAATTTATGATTAAAATTTATGATTTTCTATACAAATTTCTTTATCAAATAAAAAACTTGCATACTTTTGAACAGAATTAACGTATTTGTGTATTATTTTGAACACAAATCGCA
# Right flank :  TCCAAATGAGACAAAAACAAATTAGCAAAAAATCAGGTCGCACCTCTTTTTTCTATCCAAATAGACTTCACCAATTTCTTAATAAAACAAGCTCTTGTTCTACAATATTACTTAACTACTTTGGCTTCCCAATTGAGACGCCTACTGCTTGCTATAAAAAATTTCATATTTCGACTCCTATTCTTCTCTTTTTCACCTTTCAAATTTTCCAGACTCCATTCAAATGAAACTAAAAAAGCTGAATCCCTTCGGGCAGAAGAGGTTTCAACTTTTTATTTTTTAGTCATAACCTTTGCAACAAGTTGCCATTAGGATAGTGTATCAGCAACTTGTAGCTATTACTATGAATGCTACATTCCACAAAATTATTACATGTTTTTTCATTTTTACTTCTTAATTTATTTTATGATAAAAACTACACCAAAATTACAATTTGTTGAAGGTTTTAAAAATTATAGATTTGGACAAGCTAGATTTATAAATAATGATTTTCCGAGGTG

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCTTATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.20,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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