Array 1 8538-5886 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRZS01000080.1 Cronobacter turicensis strain MOD1-Sh41g Sh41g_S6_L001_R2_001_trimmed_contig_80, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8537 29 100.0 32 ............................. AACACAGCAAAACTGAAAGCGGCGGGCATCAA 8476 29 100.0 32 ............................. GTCGCTTTGACCTCTTTTTTAGTTTGTGCACA 8415 29 100.0 32 ............................. TATCCCCGAGTATGGACGACAGCAGAATGAAA 8354 29 100.0 32 ............................. GCTGCGCGCCAAAGGAGCGACTAAAATCGCTA 8293 29 100.0 32 ............................. GGTTTGACGGCAGAAAAGTGTTTTGAGTTAAA 8232 29 96.6 32 ............................A CCGGCGCCGATCATCATCAGCGCTGGGATCAG 8171 29 100.0 32 ............................. CCTACATTTACCTTTCAGTGAACACTTCAGGT 8110 29 100.0 32 ............................. AAATGCCGTTTACCTTGGAGCAGCTTGAAGGG 8049 29 100.0 32 ............................. AGTTACAAATATATTAGCGCGTAGGTGATTAT 7988 29 100.0 32 ............................. CGTAGCACGACAGCCTGACCCGATGGCCGCAG 7927 29 100.0 32 ............................. TTTTCCTTATCCGGTTCCCAGCACTGCCACTT 7866 29 100.0 32 ............................. CTTTTAACGCCCAGCTCCTTCAGCTTCGCATC 7805 29 100.0 32 ............................. GTAAATTTCCGCGCCCTGTTAAGATTGGCAGA 7744 29 100.0 32 ............................. GGTGTCTACCGGAGGCGAAAATGGCGAAATTT 7683 29 100.0 32 ............................. CCCCGCCCGCGCCTGCAACTGGTCGACGGTTG 7622 29 100.0 32 ............................. TGGTGCCAATGGCCGCGAACAGGTCAGCATAG 7561 29 100.0 32 ............................. TGTAGCCCTGAGAGTTTTTCAGCGAACAAATG 7500 29 100.0 32 ............................. CAAACCCGCCGTTAGTGTCAAGCTCCAGAAAG 7439 29 100.0 32 ............................. GGTCAGCCCCAGGCGCTCAAGCGCAGCGTATA 7378 29 100.0 32 ............................. CAAAATTTTTTGCATACTGCCGCTTAAATCGG 7317 29 100.0 32 ............................. TCGATAACCTTTTCCATGTCTTACGCCTCCGT 7256 29 100.0 32 ............................. CGTGACGGTTCTGTATCCTGCCTAGGTTTTCG 7195 29 100.0 32 ............................. GGTTGAATTCTTCACTGAAGGACTTTGCACAC 7134 29 100.0 32 ............................. GCATCTGGCGTCACTCTCACGCGGGTAAAGAG 7073 29 100.0 32 ............................. CCACCGCGGTAATCCGGGCAATAGCGATCGGC 7012 29 100.0 32 ............................. TCGATTCGTATGTTCGCGAGCTCATTTAGGGC 6951 29 100.0 32 ............................. GGACAAACATCGCGCTGGGTTGCCGTTATAAC 6890 29 100.0 32 ............................. ATGCTGAAAAGTTGGGTATCGAAATGGAATAA 6829 29 100.0 32 ............................. CTGTCACCCGCCTGCAGTGTGGCCCCTTCATC 6768 29 100.0 32 ............................. CGTGACTCGCTGGCTGGCGCAGGCGTGTCTGT 6707 29 100.0 32 ............................. TCGGTCACACGGATGGTTCCGCGCATTCTGCG 6646 29 100.0 32 ............................. ATGGACAAAGCGCCGCTGTTAAGCTGTCGTCG 6585 29 100.0 32 ............................. GAGAGGCGCCGGGCAGGTAACGAAACGTCCGA 6524 29 100.0 32 ............................. CACAGCTTGCGTGCCTGTTCGGCATACGCCTC 6463 29 100.0 32 ............................. CATCGCTGCCGACGTTGAAAACGAAGCTGTAG 6402 29 100.0 32 ............................. ACAGGAAGAGAATCTGCCGCTCAATCATTATC 6341 29 100.0 32 ............................. GGTGAATTTTCGGAGGGAACTGAAAAAACCAA 6280 29 100.0 32 ............................. GGTGAATTTTCGGAGGGAACTGAAAAAACCAA 6219 29 100.0 32 ............................. GCGTGACGCGGGTCACATCACACACGCCAGAC 6158 29 100.0 32 ............................. CGGTGAGCTCGCTGTTCGCGCTGTCGAGTATC 6097 29 100.0 32 ............................. AGTGGGAAAAAAACGCGCAGGCACAGCAAGAG 6036 29 96.6 32 ........T.................... AGTGGGAAAAAAACGCGCAGGCACAGCAAGAG 5975 29 96.6 32 ........T.................... GCGTCCTGTATCTCGCTAAACGTGACGGTCGG 5914 29 93.1 0 ..........................A.A | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.6 32 CTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : ATGAAAGCTTCAAATGGATGATGGCGAACAACATCGCGTTTATCGTCGTTAACATCAATATCAACTACCGGCGGCCCGCCGTGCTTGGCGATCTGCTGACCGTCACAAGTCAGGTGAAACAGCTTAACGGTAAAAGCGGGATACTAAGCCAGGTCATCACGCTGGAGCCCGAAGGCGAGGTAGTCGCCGATGCGCTCATCACCTTTGTGTGCATCGATCTGAAAACCCAGAAAGCGCTGCCGATTGACGGCGAGCTGCGTGAAAAACTGGAAAAACTCACAGGGTAAATTCTGCAATACCGGTGCGTGTGCCCGCCATCGTGGATTTATCGCCGCTGAAGATAAACAATCCGGTAGATGTTAACGGTCCACAAGCGTTGCTGAAAAACGCCTTCAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTGTAAAAATGTTGGTAGGATGTGGAAGGCGAAAAAATTCTAAGCAGTACAAAGCGTTACTTTTAGT # Right flank : AACTTTGTTGGCTGTACGAACAGCGCGACGCTGTCAGCCCCATATCCCGTCACATTCTTCAGCACCGTTTATACTTCAAAGCCATTGTTAAATTCTCAAGACTGCGCAACAAAGGAGAGGCTATGCGAGTACACCATCTCAATTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTACGATGGATTCAGTAAAGGGTTGCACGCGCATCTCATCTGCCACTGCCTGCTTATTGAAACTGAACATCACGGGCTGGTGCTGGTGGATACCGGTTTTGGTTGTGATGATATGCGCCATCCTGGCCGCCGTTTGCCGCTCTTTTTCCGGGCGCTGAACAATATTCAGTACCGGGAATCATTAACGGCGCTACATCATATTCAGGCGCTGGGCTTTAAGGCGGAAGATGTCCGCCACATTGTGCTGACGCATCTGGATTTCGACCACGCGGGCGGCATCAGCGATTTTCCGCACGCGCAGGTGCATTTAATGCAACGGGAAATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //