Array 1 133232-134818 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNKB01000001.1 Selenomonas bovis 8-14-1 T485DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 133232 28 100.0 32 ............................ TCCATGTCAAAAAAGCCGAGACAGTCAAGCGC 133292 28 100.0 32 ............................ TTTCATCTCAGCCGCGACGGAAACCGCTGATG 133352 28 100.0 32 ............................ AAAATTCCGGCTCGAAGACATTGATCCGAGTC 133412 28 100.0 32 ............................ ACAGCTCGCGGCTCGTTGTATCGCCGCCAAAC 133472 28 100.0 32 ............................ TGCCAGCAGTCCCGCAGATATGCCTTGTCGTT 133532 28 100.0 32 ............................ CTACACTCGGCAGAAGCGGCACGTGCTCCTCG 133592 28 100.0 32 ............................ TCGATGAAGTTTGCGAGGAACTGCTTCTTCGT 133652 28 100.0 32 ............................ ATGTTGTTGAGCATCGCGTCCCTGTACCCGTT 133712 28 100.0 32 ............................ CGTCTGCCGGGAACAGCCGCCCGGCACCGATG 133772 28 100.0 32 ............................ TCCAGGTTGAATTTCGCTCCGGCTTTTCTGAC 133832 28 100.0 32 ............................ GCTGCCGCGCACGACATGAGCATGGCGGCTTT 133892 28 100.0 32 ............................ TGGGATTTTGAGACCGATAAATTCCGCTATGA 133952 28 100.0 32 ............................ TGCTCCTTGACTTTTGCGGAGAACTGCGCCGC 134012 28 100.0 32 ............................ TGCTGTAGCGGCTCGGCATATAGCCTGCTTGC 134072 28 100.0 32 ............................ TGACATCGACTGGGTTTTCCCAATCGCACGCA 134132 28 100.0 32 ............................ AACAGGCACTGTGCCAATCCCTGCTCGTTCCC 134192 28 100.0 32 ............................ GTCTGCCGCCGCACCGTCTGAAGAATCTGCTT 134252 28 96.4 32 ...................T........ TCATAAATTTTTTCAGTAGGATTTTCATGAAT 134312 28 100.0 32 ............................ TTTATCTCTTCGTGTGCTGTGCGCTGCCCCGT 134372 28 100.0 32 ............................ AACATGCCCGCGCCCTTCCAGCCTACGCAATC 134432 28 100.0 32 ............................ TGGTATTCCTCCTCGCGGAACACGCCGCCGAA 134492 28 100.0 32 ............................ ATTGTACGACGCGGTCGCGAAACGGCAGGGCC 134552 28 100.0 32 ............................ ACGGCAACACACCAAGAAAAGCAAGTCAGGGT 134612 28 100.0 32 ............................ TGAACGCGCGAGGATTTAAGGCGGCGGAGGTC 134672 28 100.0 31 ............................ CTGGATAGACAACTTATTACCTATGATACGT 134731 28 100.0 32 ............................ ATAAGGCAACCAGTAGAAGCACCACAGGGATT 134791 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 27 28 99.7 32 GTGAACCGCCGTGTAGGCGGCTTAGAAA # Left flank : GGAACAGCTGCAGTTGAAAAAGAAGCTGAACCGTTTGCAGGATTACCTGCACATGAAAAGCGTCAAGCCTGTGCCAGAGAAAAAAGTCCATTCCTATGCCAGTTACAGCCGCTGGCACAAAGAGAATACGAAAGAGCAGAAAGTGCGCCGCTACCTGAAGCGCCACAGCGATGTGACTGAAAAGGAGGCAAGGGACCTGTTCCCAGGGGATCAATACGGCAAGGAACCGCCGTTTGTCCAGATGAAGAGTTGCTCTAACCATCACCGCTATCAACTATATATCAAAAGAACGGAGAAGCAAGAAGAGGTGAATGGTCTGTATACTACCTTTGGTTTGTCCATGGATGCGACGGTCCCTGAGTGGTAAAATACCAAAAATTTTTAGGTAGTAGGAAGCCCGTGAAATATAGGGGCTTGTCAACGATGAAAAATTTTTGGTAAAATAAAAAGGTCGGTTGCAATACCCTGTAATAATGGGCTTTTTTGCTTGTGTATATGCA # Right flank : AAGGGAGAACTTCCTTCGTACGACATCCTGCGTCGTAAAAATCAGGAAGCTCTCCATCGGCCTTTGCTGTAATAGAACTCTTGACATGCGTCATGGACCGACAGGGGATTTTTATGTCTCGTGTAGGTTCACCATGCATATGTGAAAACCAACCTCTGTAAGTCTGTCTGTATTCTTGCGCACATAGCGGAAACGGTTTATAATTCCATATAGTAGTTTCTTTCCTATATGTTGCGTGAAGGTGGTTTGTTTTTTGCGAGAGAAAGAGCCTGTGGAGAAGGTCATTTATTTTGAGGATCAGAAGGAAGCGTACAGTCTGCTCGGGGGGCGGGATGAGTTCATCCGCGTCTTTCAGGAGAATTTCGATTGTCAGATGGTGAGCCGGGGAGACAGGCTCGAGATTCTCGGCGCGCCGGAGGAGGCGGGGGCTGCCGCGCATGTGCTCGAGGAGCTCCAGTATCTCTATCGGCAGGGAACGCAGATCACGATGCATGAGGTAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAACCGCCGTGTAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //