Array 1 131595-129980 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEDT01000001.1 Lactococcus reticulitermitis strain Rs-Y01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 131594 29 100.0 32 ............................. ATGACAATCGGAAAACCTTTTACTATATCGCC 131533 29 100.0 32 ............................. ACAAGATACTATCCAAATATTGTACTCTGACC 131472 29 100.0 32 ............................. ATTATTGTTAGACACAAAGAGAGATTAGTATA 131411 29 100.0 32 ............................. ATCTGGTTTATCCTTTCGATCATATACTGCAA 131350 29 100.0 32 ............................. GGTGACGCAAACTTTAAATTTGATAAAGTTAC 131289 29 100.0 32 ............................. GATGATGGAACTGTTATGAAAGAGTACATCAG 131228 29 100.0 32 ............................. GGCACGTATGATAAACGAAACTGGTGTCATGG 131167 29 100.0 32 ............................. AAAAGGAGTGGTATCCTCTTATTTGGGTATTT 131106 29 100.0 32 ............................. GGCACTCGCTTAAACCAACTGAGGTAGTCAAC 131045 29 100.0 32 ............................. ATATTGACAACTACACAAAAAGGGGGGGAGCC 130984 29 96.6 32 ............................C ACGATACAATGCCTTCTGTTTCGATACATACT 130923 29 100.0 32 ............................. ATATGGTCGCCAAATTTAAGCTCTCCAGAGCT 130862 29 100.0 32 ............................. TCATTGCGGTTGAAAAATTGATTTCTGTATAA 130801 29 100.0 32 ............................. TGATAGAGAAGTATTTAAGTCAGAATCCTCAA 130740 29 100.0 32 ............................. ATCATCTGTCATTGATGAAGATAAAATATCAG 130679 29 96.6 32 ............................C GATTTCTCATTTGATAGTGTTTCTGGCTTTGA 130618 29 100.0 32 ............................. GCTGGTTCTGTAATTGTTGGAAGTTTAATAGA 130557 29 100.0 32 ............................. CAACGTCAAGTCGATTATGTGCAGTTTGAAAC 130496 29 100.0 32 ............................. GGCGCAGCAGTCGTTGTTGATCATGGATTTGA 130435 29 100.0 32 ............................. ATCTGATTTTAATGAAATTTTGGTCATATCAA 130374 29 100.0 32 ............................. GATTGGCAACATTGTATAAATAACGTTTATAA 130313 29 100.0 32 ............................. ACAAGTGTGTCATCTAGCTTAAAATCTCTGTC 130252 29 100.0 32 ............................. GATGAACTTCTCGTCGCCATGAAAGTGTCCGA 130191 29 100.0 32 ............................. AGTCTTAATAATGCTATGTTTGTTATAAAAAC 130130 29 96.6 32 ............................C GGGTAGGCTTACTGTCGTTATTATCACGATCA 130069 29 100.0 32 ............................. CGCAAAGGAGTTATATTGAGACAATTATATCA 130008 29 86.2 0 .......................CT..TA | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.1 32 ATATTACCCGCACATGCGGGGATGATCCT # Left flank : AAAGAGTGATCAAATTATTGAGATTGGTGCTGTTAAAGTTGAAGGGGAAATGAGAACAGAGTTTCAAATTTTGATATCATATGAAAAACAGTTACCGAAATATATTGAAGAACTTACTGGTATAACTGATGAGTTGCTTTTGAAAGAAGGTCAGGAAATAGGAAAAGCAATGAAGGAATTTGCCAAATTTGTCAGGGATAGTCCACTAGTTGGCTATAATGTTGATTTTGACAAGAGTTTTATTCAAAGCGCAAATAAGAAATATGATATTTCAAATTTTGATCATCATCAGTTTATAGATTTGATGAAATTTGTCAAGAAAGAAAAGATGTTTCTTGGGAATTATAAACTTCAAACAGCACTAAAAGCTTATGAGATTTTTGAAGATGTGCCACATCGAGCATTAGAGGATTCAAAGTTGATGGCTGAATTAGCAACAAAAGTGAATGGATTTCAAAATTTTTTGAAAAAAGACGTTGAAAAGTAAGGGATCGATTAGT # Right flank : TTTGTTTCTTGTGAAAATTACAATAGACATTATGTCTGTTGTAAACTATCTATAAGAGTTTTCCGTACTCATTTTCTTTTATAGATGGTTTAGAGCAGATAATTTTTAATTTAAATTGAAAACATTTACTAACATATAACCACAATTTGTGATATAATAAAGTTAGTTAAGGAGGATATGTTATGACTACTATACAAATTTCTACAAGAGTTGATGATAAAATAAAAGATATGGCTCAAAAAGTTTTCGAGCGCCAAGGTCTTGATGTTTCAACTGCTCTTAAAATGTTTATTACTAAAACAGCATACGAACAAGAAGTGCCGTTGTCTTTAAAAAATAGTGAGACTACTATTCCTTATCCTGCTGATTGGTTTACTGAGGGTAGAATAGAGACTAGAAAAAATATTACTGATTTAGCTTTCCAAAATTCTCAAATTCAAAAACTAGATTTATCTAAAAAAGAGGATATAAAGGATTTTTTTGATGACTAAAGATATTAG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTACCCGCACATGCGGGGATGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.30,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //