Array 1 1048816-1050064 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP051727.1 Escherichia coli strain SCU-111 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   1048816	    29	 100.0	    32	.............................	ATTAACGGTCGCATCATCATATTGAAAAAATC	
   1048877	    29	 100.0	    32	.............................	TTATATAATGGCGCATTATTTTGGCGTATCTG	
   1048938	    29	 100.0	    32	.............................	CACATTTCGCAAGACGCATACGGAATCGCGGC	
   1048999	    29	 100.0	    32	.............................	GTGTACCTGCGCAAAAAATAAGCGGCGGCAAA	
   1049060	    29	 100.0	    32	.............................	CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA	
   1049121	    29	 100.0	    32	.............................	GCTATCGGGTGTGGATACCGCTTTCGAGGCGT	
   1049182	    29	 100.0	    32	.............................	CCGAAAATACACCTAAATCAGCAGTTATCGCT	
   1049243	    29	 100.0	    32	.............................	GCGAAAGCCCAGCGGAGATTCATCACGTCCGC	
   1049304	    29	 100.0	    32	.............................	CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA	
   1049365	    29	 100.0	    32	.............................	AAGTATTTCCGTGCACCGTGGGAGGCGTTTTG	
   1049426	    29	 100.0	    32	.............................	TAGTTGTGCTGATTTTTGATGGATGGTTATAA	
   1049487	    29	 100.0	    32	.............................	GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA	
   1049548	    29	 100.0	    32	.............................	GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA	
   1049609	    29	 100.0	    32	.............................	AAATGGCATTCGCTGTTGGAATTATGGGGTAT	
   1049670	    29	 100.0	    32	.............................	AGCGATTTCAACGCGGCGACGGTGGACTTAAT	
   1049731	    29	 100.0	    32	.............................	CCAGTAGGCGATTTGCGGGGCGTTCATGTTTT	
   1049792	    29	 100.0	    32	.............................	AGTCAAAATTAGCAAAACTTGATTCAAATAAC	
   1049853	    29	 100.0	    32	.............................	TCCGGCGAGCTGGTCACCTGGCTGAATAAATT	
   1049914	    29	 100.0	    32	.............................	GAAACTGAAATCGCGGTTGATAACGCTGATAT	
   1049975	    29	 100.0	    32	.............................	GGTAAAAACACGGTCTGAACCGACATTCATGT	
   1050036	    29	  96.6	     0	............T................	|                               	
==========	======	======	======	=============================	================================	==================
        21	    29	  99.8	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//