Array 1 31297-33041 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWU010000045.1 Planktothrix mougeotii LEGE 06226 NODE_100_length_46900_cov_6.544759, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================== ================== 31297 37 100.0 35 ..................................... CTGAACCGATGAACGATTGAGTTCACCCCGTTCTG 31369 37 100.0 41 ..................................... TAGACTCTAGCTCCTGATTCCGTTCCCCTAGCTCCTCAATA 31447 37 100.0 35 ..................................... ATCTTCCCCGCCGTAAATTTCATGCCAGAATTTCT 31519 37 100.0 36 ..................................... TCAATATTTATTCAACTTGAATAAACTTAAAAATAG 31592 37 100.0 34 ..................................... AAAGCCAAAAGATGATTATGAAATTAAGAATATG 31663 37 100.0 34 ..................................... TACCGTTCTGCTTATACTGTCTAATTTGGGCGGG 31734 37 100.0 39 ..................................... TAATTGGCTTATAAAATTAATTGTATTAATCATTATTTT 31810 37 100.0 31 ..................................... GGCTGAGTTCCCGTTCCTTGGGGGTGAGCAA 31878 37 100.0 39 ..................................... AAAAGGAAGTGTTGGATTAAAAACCACGCTGGCAGAAGA 31954 37 100.0 50 ..................................... AATAATTATATTATTTTAAATAATTATTTCATTCCTACGGAACATATAAA 32041 37 100.0 36 ..................................... CTCTAACGCATCCATTACTGCATCAAAATATTCCTC 32114 37 100.0 32 ..................................... ATCTAATTTATCCATTTTCTATCCATTCACAA 32183 37 100.0 43 ..................................... AGGATGGCGGTGATGACGGTGAGGATGACGGTGATGTTATAAT 32263 37 100.0 34 ..................................... CTATATTGAGATGTGGGAGACAACAACAAAGCCT 32334 37 100.0 35 ..................................... ATAATCAAAGAAGGGTGAAGGCAGTAATTGATGTT 32406 37 100.0 44 ..................................... CTACGGATAGCAGTTTTGACAGAAATACTGTTCCCAGTTCCTCG 32487 37 100.0 36 ..................................... CTACGGATAGCTGATTCAGTCTGAATCTCAAACCGG 32560 37 100.0 35 ..................................... TGGTGTGAGGGAAGAGATAAGGAGGGAAAATTAAC 32632 37 100.0 35 ..................................... ACAGGAGTAATTCTGACCTCAATAACTGTATTGAG 32704 37 100.0 36 ..................................... TTCATGTTTAGCTGCATAGTCAACCGCGTCTAGAAT 32777 37 100.0 38 ..................................... TTCCTCCCTTAGTAAAATTTGTTAATTCCCATAAAATC 32852 37 100.0 44 ..................................... AAAAGAGGTTTAGATCCCCGGTGGGTAGCGAAAAACTGTTTCAC 32933 37 100.0 35 ..................................... AACGACAATTTGGATTCCTATTCACAAGGGATTAA 33005 36 81.1 0 ..................-T.......CA..A.GG.. | T [33032] ========== ====== ====== ====== ===================================== ================================================== ================== 24 37 99.2 37 GTTATAATAACCATTAATCCCTATCAGGGATTGAAAC # Left flank : TTCTAATAATTGGGGGGTAATTGAATTGGCTAATAAACGGTTTGATTCTGCTTCTGCTCTAGCTTGTTCAATGGTGACTTGAGCTTCTCCTTTTATATGCTGTTTTTTCTAAACTTTTTTCAGGGGGATAACCGTACTTTTTAAACGCTGTTGACAAAAGATTAAAATTTGCTATAACTAGATAGAATCTGGGAAATTTGCGATCGCTATTGAAAACCAACCTAATTTGATCAATCTTTTGGCTTCCACTAGCGACAACTGATAGGTGTTGGGAACAGAAAGACAAAATTAAGGGCTGAAACTTTTGTCTGTTCTGGGTTTGAAGTCTATCTACTTGATTAAGAGGTTGGCGCAAGTTCTGAAAGTCTTATGGGAAAGGTGTTTTAGGCTATTTTTATTTTTTCCTCTTGCTAACTCAATGGCTGAAATGGTATATTTAGATCTGTTAGGCGCAATCGAACCTCGAAAACTTCATAAATTAAGGGTTTCAGAAGCCTGCG # Right flank : CTCTTGCAATCGGGAATGGGGAATGGGGAATGGTTAAGAGTCAACACCCCTCTTTTCCACTGATCTGTTTAAGAATGTTGTGAATCATTTAATATAGTGAAATCCTGTAATAATTTATGTTTAGTTTAATGATTCATCAACAGCGTTTTTCCAGATTGTTATTGAGTTTCTTGATAACCCTTTCCTTGAATCCCTTACTGTTAGTGTCTGTCGCTCGTTCTCAAACTTTAGCTTATTGTAAATTATCTCCCCAAGCGATCGCTCAAAAAGAAAGTTTACGACAAACCGCATTAACCGGAGATGCCCAGGGTATTCAAAACTATAATACCATTATAATTCAACACGCTCAACAAGTCAATCAATGTCGTCAACGAATTAACCCCAAAACTCAAGCGATATGGTTAAGATTATATCCCTGTGATGCTCGACCCGGAGAAATTGAGCGGATTTTAGATAATATTATTAATAAAGGATATAATAAAGTTTATTTAGAAGTATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATAACCATTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 114617-112904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWU010000001.1 Planktothrix mougeotii LEGE 06226 NODE_2_length_242624_cov_7.081407, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 114616 36 100.0 36 .................................... TTGATAGCTCGTTCCGCTGATAGTGGTTTCAACCAT 114544 36 100.0 42 .................................... CTGACAGCTTCAGGATTCTTTTAAGGATAACTACTCGATGGT 114466 36 100.0 42 .................................... AAGCAGCAGCAGTCAAAATGGCAACGGTCGTGGTGATAACTT 114388 36 100.0 43 .................................... CCTGGAGCTGCAGACCGTGTTTCCATGATTGAAGAGTTTATAT 114309 36 100.0 37 .................................... CTTCTGGTGTCCTCCGGTTAGCAGTGGATTAAGTCCT 114236 36 100.0 41 .................................... AATATCCTGATGGACTAACTTCTACACACATTTCATCATTA 114159 36 100.0 39 .................................... TGTCTGGGTGATACCCCAGAACTAACCGCTTGTCCCCTT 114084 36 100.0 46 .................................... TAGAATTGGTACCCGGCCTGGTACAACTCTGCAATCCAAGTCTTTA 114002 36 100.0 41 .................................... TTCATTCAAGTTTCCATAATTGAGAATATGAAATTAATACA 113925 36 100.0 36 .................................... AAATGCACCACCAAACAACTCGTCAAAGAGTACCAT 113853 36 100.0 41 .................................... AATATTCCCATCCGAGTTTAGTTGTCATCGTCTACGCCCCC 113776 36 100.0 44 .................................... TTGGACGGACGCGATCGCAGCTTCCCACGTCGATTTGGCGGTCA 113696 36 100.0 38 .................................... GGTTCTGATTTGTACCCAGTCACCAATCGCATATTTAC 113622 36 100.0 36 .................................... TTAATTGCCTTAATCCGTGCGCTATCTTCTTTCAGT 113550 36 100.0 46 .................................... AAGCACCAGCGCGAACAAAATATTAGATCAATTAAAACAACTCAAT 113468 36 97.2 42 ...................................T GTTCAGTCACATGAGGGTAAACATACTCCCCACGCAACTTAC 113390 36 97.2 42 ...................................T TTCAACTACCTGCTTACGCATGGTAGTTTCTCCTTCAGCATA 113312 36 97.2 43 ...................................T TTGTACTATAAGGAACTAACTGATAATTGGTTCCTTATTTTAC 113233 36 97.2 36 ...................................T CATACTGGTATGTACAGGATACCGCCCTTCAGTCGT 113161 36 97.2 36 ...................................T TGATGTTCGCTTGAGATTGTTTGGACAATCCTTTCT 113089 36 97.2 43 ...................................T TGGATTGCAACTGCACCAACACTCACGCCTTTGATAACATTCA 113010 36 97.2 35 ...................................T ATGTCCATTCAACACATGTATCCCGGTTTTTAGCC 112939 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================== ================== 23 36 99.1 40 CTCCCCACTCGTTGGGGAAATTAATTGATTGGAAAC # Left flank : AGCTCCCGAAATTTTACACCATTTACGTTCACCAAATCGGATTTTTATTGGGGGAAGCGGAAATAATTTAAGCGAAATATTGGGGATTTGCAGTATTCGTTTATCTCCGGGTGGTGTGATGGTTTTAGCTTTAGCAACCATTGAACATTTAAACACGGCGTTAAGCTGGTTAGACCAACGAAAACGCATTGAGCGCAGTTGGAGTTATCGAATGTTAACGGTACAATTATCCCGTTCTGTTCCCGTTGCTAATTTAACCCGTTTTTCTCCCCTCAACCCCGTGACCCTATTAACGATTTTTCACCATAGTTTATTTGCTTGATGAGGCTCAAAGAAAATGGCTGGAGTGCTTATAGTTTCGTTGGGAGCCCCGACATCCCTCTAGGTAAGGGTTCTGGCGATTTTAGAAAAAGGCAAAATTCCGTTTCAGCCTCTGACTTTTCTCAGCCTCGAAAATGCCTACTAGACAGCCGATGGTGTATGGGTTTAAAATAGGAGGA # Right flank : AAGAGTCCCCTGTAGAGACGTTGCATGCAACGTCTCTACAGGGGTTTAGGGAATAATCTGTAGCGCTGATTTAAGAATGGAATATTAATGAATTGGAAACCCAATATTTTCTAAATCTCCCTTTATCTATCGTTTAAATCGTTGTTTAATTTTTAACCATTCATCCTCTAACAACGTATTTAAAACAGGAACAACAATTAAACTTAATAAAGTCGAAGTCATTAACCCCCCAATAATAGCAACAGCCATCGGTTGTCTTAATTCTGCTCCGGCGCCTAATCCTAATGCAATGGGTAACATTCCTAAAATCGTTGAGGCGGTGGTCATAATAATCGGTCTTAAACGCACAACTCCGGTTTCAATAATGGCATCATTTCGACTCATGCCTTTTTGACGAAGTTGGTTGACATAATCCATCAGAAGTAAGACATTTTTATCTAATAATCCTAATAGAAAAATTAACCCAATTAACGAGATAATTCCAAAGGCACTTTGAGTAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCCCACTCGTTGGGGAAATTAATTGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTCTCCACTCGTAGGAGAAATTAATTGATTGGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 51774-53543 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWU010000005.1 Planktothrix mougeotii LEGE 06226 NODE_9_length_156988_cov_7.084062, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 51774 36 100.0 38 .................................... ATCTCTTAACATTAAAGCTATTAAAACAGCTGCAATAA 51848 36 100.0 40 .................................... TTAATGGCAAACGAACAATATTTCTTATCCAGCAGCAGGT 51924 36 100.0 43 .................................... CAACAACAACCCAAGGTTCATTCATATAAACTCCGTTATTGAA 52003 36 100.0 42 .................................... ACGTCGGTCCATCACACGCAGAGCAGCCTTTTGATAAGGCTT 52081 36 100.0 41 .................................... TTACGTACTAAAGGGTGGAATGTAACATTTATCCCATTTGA 52158 36 100.0 36 .................................... CGGAATTGATAAGGAAGTTCAGCCCCTGCTTGTTCA 52230 36 100.0 45 .................................... ATCAACCCAATCAGGGTTGCACATATCTTCAGGTTCGAGTTGAAC 52311 36 100.0 43 .................................... CATGCTTGTTTAGGAGTGATATCCACTTTAATAAACTTCATTA 52390 36 100.0 40 .................................... TGGTCTGCATATATACAGCCACCATTTCTAGTAGCCATAT 52466 36 100.0 44 .................................... ATCCATACCAGGTTCACGCCACACACCAGTCACACATTTCTGCA 52546 36 100.0 47 .................................... CTTGCTGATAGAGATCATCAACTGAACGATATTCAAGCTCAGACCTG 52629 36 100.0 35 .................................... AAGAGGAAGAAGAACCCAGAAGGGAGCCCAGAGGT 52700 36 100.0 37 .................................... TAGCCACTTCTTTCTTGACTTCAGGAGCAGCCTCCAT 52773 36 100.0 35 .................................... TTGTTAATAATTTACTCATTCAAGCCTCCACAATT 52844 36 100.0 37 .................................... AAATATAGAGAGGAACATCCACAAAGTCATTCTGATA 52917 36 100.0 35 .................................... TGGAAGAAGTTAAGCTTTTCATAATCGGGTCTCCT 52988 36 100.0 41 .................................... TCTTTATCAAATATAATCTTATGTTCTTCTCCATCAGCACT 53065 36 100.0 41 .................................... AATTTGAATTAGAAAGAGTTAAGGGTATTAAAGTAATAAAT 53142 36 100.0 38 .................................... CCAGCACTAGGATCATCAACAATAACAGTTACAAGGTA 53216 36 100.0 36 .................................... AAGGAATGAGAACTTTGATTGAATTACTAGACTCTA 53288 36 100.0 40 .................................... TTAATGAATATGCATAAAGCAACATTTGTATTCCTCGGCA 53364 36 100.0 37 .................................... CCTGCTCAATAGCAACAATCAGATTATGGCCTTGCCA 53437 36 100.0 35 .................................... AATGGGTTTCCCACTACTCCGCTCAGAGAGTTTAT 53508 36 88.9 0 C....C.....C.G...................... | ========== ====== ====== ====== ==================================== =============================================== ================== 24 36 99.5 39 TTCCCTACTCGTTAGGGAAATTAATTGATTGGAAAC # Left flank : GTGTGTGTTGGCTGAATCGAAATATCTTGAGTTACAGAAACGCTTAAAGAAACAAGTGAATCTGGCGGAAGATAATCTGCGGTTTTATCCTCTTTCTCGCCATACCTGGGGAAGTGTGGAAACTTGGGGTCAGGGGCCAAAGATTACGGAGTATCCGAGTTCGTTGATTGTTTAAGGAGGTTGGGGAGGTTTAGGGAAGCTTGATGAGCCTCGCAATTCCTCTGGGTAAGGGTTTCGTTGTTTTGCTAGGAAATGGAAGGAGGGATTTGGTTGGCTGGGATGAGGGAGCTTAGAAGGGATAATCAACGGAATCATGGGCTCGCGAGGCTCAGACAAAATGGCTGTAATACTGATTCTCTCATTGGGAGCCTCGATATTGCTCTGGATAAGGCTTTTGGCGATTTTGGCAATAGGCAAAATGTGGTTTCAGCCAACGGTTTTCCTGAGCCTCGAAAACCCCCCCTAGACAGCCGATGGTGTCTGGGTTTAAAATAGGAGGA # Right flank : CAGGTTTGGGAAGCGATCGCGATATTCCGACCACTTCCCAGATCTCTCTACTTGCTAGGGAAATTCTATAAAATCCTAGTTTAAATGCACAATAGCTTATTGCAATTGCAGTTGTCGTTGAACTTTAACTAAAATGCGATCGCCTCTAATTAATTGATATTCCGCCTTCCAATTTCCGGGGGTTAAAGGGGATTGAGGATTATTCTTTTTCCCCACATAACCAATCCAAGTTTTACTCGATTCATTCACAAAACTTTCATTATTAACAACTTTTATTCCCTGGGAATCATAAACATTAAAAATCATTTTATCTCCCGTTAATACCCCGTAAACTTGTACCCAAAATAACAATGCTGGACTATCTTGGAGTAAAATAGTTTCATTAAATTTACCCTGCCATAATTCATCCATTGTGGGGGGTTGGGTTGAAAATCCAGCCCGAATTAACCCCGTTGGAATATAGGCTAAAGATTGTTCCCAAATGGGGTTACGAGTGACGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCCTACTCGTTAGGGAAATTAATTGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 19610-20722 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWU010000055.1 Planktothrix mougeotii LEGE 06226 NODE_124_length_40418_cov_6.914969, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 19610 37 100.0 36 ..................................... TTCGGACTAACTGGCGGCGCGATGTTGGATTACCTT 19683 37 100.0 35 ..................................... TTGTTGAGCCAACTCATAAGCCATTTGAGCGTTCT 19755 37 100.0 35 ..................................... TAACTGGCGGTGACTGGTTACGGGGTGAAGAGAAG 19827 37 100.0 35 ..................................... ATCGGGAAAAATGTCAATCGGTTCCGGTGTCGGTT 19899 37 100.0 33 ..................................... TACTCTGGCAACAGCCGAACTCTTAAAAAATAG 19969 37 100.0 34 ..................................... AAGTTTGATGAACACTACAGTAGACACCCCTGTA 20040 37 100.0 34 ..................................... TGGCTTCCGGGTATGCCTAGCGAGGAACTATTGG 20111 37 100.0 33 ..................................... AATTTGTTTAATTCCCATAATCGCGGCGCTAAC 20181 37 100.0 34 ..................................... ATTTCTGAAGACAATCACGCCACACCCCCCGGAA 20252 37 100.0 39 ..................................... TTTCAGGTTTTTTGGAAAGTGATCCTGAAATTCAAAGAG 20328 37 100.0 35 ..................................... TCGGAACTCTCAAATTGATATTCAACTAAATCCTT 20400 37 100.0 36 ..................................... GAGTTAACCTAATCGGAGGTCAACTAATGACTAATA 20473 37 100.0 35 ..................................... TAGAATCCAGATTGCAGGTGAGAGAATCCCTAGGG 20545 37 100.0 34 ..................................... GTTGCGGTCATAATTAAATTCCTAATTGTTTTGG 20616 37 100.0 33 ..................................... TGGCTATTTACTGGCATCTCTGAGATGTTGGTC 20686 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 100.0 35 GTTATAATAACCACTAATCCCTTTCAGGGATTGAAAC # Left flank : AGGGTAGGCGTTTCCCAGGTTTGGGGTTCATAATAAGCAAATACAAGCAACACAAAAACTATCGTTTCTGGAGACTTAGGAACAATGAATACAGACTTAACCTACGGATTATTATTGGCTTTGATTAATGGCGCGATTTGTCTATTGTTACCTGCAATTGTGTCTTATCTCCAACGTCAACGCCAGAATAATGATCAGTCATCTGTCATGACTCAGCAGCAAAACTAATGGATTTTGACTACTCTAAAGTTGCGACAACCTATCGCTGTTCAAAACTTATATGGAAATTTCAGGGCTGAAACTGTTGTCTGTTGAGGGTTTGAACTCTATTGGTTATCTTTTGAGGTTGGCGCAACTTTTAGAAGTAATACTATATAAGGCTTTCAGCGTTTTTTGGTTTTTCCTTATTGTCAAGTCGATGGCTGAAATGGTATATTCAGATCAGGTTGGCGCGATCGCACCTCGAAAACTATATAAATTAACGGTTTCAGGAGCCTGCG # Right flank : CCTAGAATAGATAAGTCCTCAGCATTATTTATTATAAGCAATTTTGTTCCTAGAAGGTTGATCTGCTTCCGGGTATGGCTCTCGGCCAAAATCGAACCGCGAAAGAAACTAATGCCATTGCTTGGTTAAGTTGTTGCAGTTGTCGTTGAAGTTGCTTATAATTTTGCCTGAGTTGAGCACTTCCCTGTTGTCCATAATCAATAAAATTCGGTGCTCTTTCTAAAACAAATCGGGTGTTACGCTCCATTAAAATTAACCGTTTTTCTAAACGATTAATCATTAAAGTAAACAGCCAGATTTTTCGAGCGATATACAAACAGACTAAAGAAATTAAAATATTGATGATAATAACAGTAATCAGCATTGTGATACTTTGATCATAATCAAGGATTGTATCATCCGTCAACTACTTGTATTGGCTATCTTAAAGAGATTGAGGAACTAGAAAGGAAAAACCCCTCAAAATGTTAACACTTTAAGGGGTTTTATCGAGTGCCAGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATAACCACTAATCCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 4763-4144 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWU010000081.1 Planktothrix mougeotii LEGE 06226 NODE_171_length_27207_cov_6.735414, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 4762 37 100.0 40 ..................................... TCAATTCAAATCCCTCTTTACAAGGGATTGTTAGCCAATT 4685 37 100.0 40 ..................................... AATATACCATAAGTCTTTTGTTTATCACCATACTCCAATA 4608 37 100.0 38 ..................................... ACAGCGATATCTTCCGGATCAAAAGGCAATGGATCAGG 4533 37 100.0 34 ..................................... CTTCAATGGATAATTACAATGATAATAAGTGAAT 4462 37 100.0 33 ..................................... GATGCTTTCTTCCCTTCTAAGGATTTCCAAAGC 4392 37 100.0 34 ..................................... AACTGGATTTATGAAAGCGGTGGGAATAAACCCA 4321 37 100.0 35 ..................................... TACGATCCCAAATCTTCTCACTGGTGGTTTCTATG 4249 37 100.0 32 ..................................... AAACGGATTTGTTCAAGCCGCTCCTAAAATTT 4180 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 9 37 100.0 36 GTTATAATAACTATTAATCCCTATCAGGGATTGAAAC # Left flank : ATTTCTGAGGATAAACGTCGCACGAAAATTCATTCGATCTTGAAATCCTATGGTCAATGGATGCAGTACAGTGTTTTTGAGTGTGAGTTGACAAACACTCAATATGCTAAATTGCGATCGCGTCTCAACAAAATTATTAACCCTGAAACGGATAGTATTCGCTTTTATTTCCTTTGTGCTTGTTGTCAGGGTAAGGTTGAACGCATCGGCGGCGAACCTCTACGGGATCATACGATTTTCTTTGCTTAGTTGCGCCTACCTGTAGCTGTTGGGGAAAGAAATGCTAAAATAATCGCTGAAACCGTTATCGGTTCTGGGTTTAAACTGTTTCGCTCATCTTTTGAGGTTGTCGCAATTCTTGTAAGCCTTATCCTGAAAGAGTTTCAGCGTTTTTTTAGTTTTGCCTATTGTCAAGTCGATGGCTGAAATGGTATATTCTGATCAGGTTGTCGGAATCGCACCTTGAAAACTAAATATATCAAGGGTTTCAGAAGCCTGCG # Right flank : AGAAGGCTTTTATGTTGCGTGAATAATGGTGATCAGTATAATAAAGATTATTAATTCTAAAAAATGGACGCAAATGTCTTTGTAGGGGTGAGGCGCGCCTCACCCTTACGAGGAATAGGATTTATTTGTCGGTTTTGGGTTTGTAAGTCGAAGCAACGTAGAGTTCCTTTAACTGTTTTTGGTCTACGCCAGAAGGTGCATTTGTTAATAGACAACCCGCTTGTTGAGTCTTCGGAAATGCGATAACATCTCGAATTGATTCCTCTCCCGATAATAACATCACTAATCGATCTAAACCGTAGGCAATTCCCCCGTGTGGCGGAGTTCCGTATTCAAAAGCTTCTAATAAAAAGCCGAATTTATTGTAAGCTTCCTCCATGGTTAATCCAATGGTTGAAAATACCTTTTCTTGAATCTCTCGTTTATAAATCCGTAGACTACCACCGCCGATTTCATAGCCATTTAAGACCAAATCATAAGCTTGCGCTCTGGCGTGGGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATAATAACTATTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : NA //