Array 1 601-32 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIPL01000029.1 Vibrio cholerae strain 3568-07 NODE_146_length_608_cov_3.12839_ID_291, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 600 28 100.0 32 ............................ TTTGTAAGAGTATGCTTCGTGCTTGGTCGATA 540 28 100.0 32 ............................ TGACGACGAGATGATGCTGCCTTGACCAGCTC 480 28 100.0 32 ............................ CCGTTCTCACTCAGTACAGATAGAAAGCCGGA 420 28 100.0 32 ............................ TTTGCGGCACATCAATAGCCGATAACAACACA 360 28 100.0 32 ............................ GTTCAAGGTTACCGCGTTTAACTCGGTTCAGG 300 28 100.0 32 ............................ GTTGGAATATCGAGTAGATAACTGGAATTAAT 240 28 100.0 32 ............................ ATTGAACCGAACCCCCTGTGGTTTAGGTGTGA 180 28 100.0 32 ............................ CAAAGCGCCGTGACGTAATCATTGCAACGCTT 120 28 100.0 33 ............................ CCTCAAATTATCATTGATGCGCTGAAATCAATG 59 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 32 GTTCACTGCCGGACAGGCAGCTTAGAAA # Left flank : TGATGGG # Right flank : ATGTCTAATGCACCGAGCCCACGTGACTAAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [23.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //