Array 1 23773-25044 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOU010000003.1 Bacteroides ovatus strain 1001275B_160808_G1 NODE_3_length_356975_cov_36.8859, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 23773 47 89.4 29 A.........A....T.........A..............A...... AGAAATTAAAAAAAAAGTCAGCCAGCAGA 23849 47 100.0 29 ............................................... AATTATTTTCATTAAACCATTGAAATGTA 23925 47 100.0 30 ............................................... TCTACCATTTGCTGTGTGCTATGAAGTATA 24002 47 100.0 29 ............................................... CGGTTATAGCCCAATATAGAGCCTTTTCC 24078 47 100.0 30 ............................................... TAGGGGGTTAGAGCTATATTGTAAAAGATG 24155 47 100.0 30 ............................................... AGGAAGTCAAAATTGATGTGGCGACTGTTA 24232 47 100.0 30 ............................................... TCATAGCAATAGAAAATGCACAACCAGGTA 24309 47 100.0 29 ............................................... AACTATCAATGGATGCATTAAACCTAGCA 24385 47 100.0 30 ............................................... TGGTTGTCAATACACCACTTCAAACACTCC 24462 47 100.0 29 ............................................... CTTGGGAAACCTTTCTAAGGCACTGGACT 24538 47 100.0 29 ............................................... TATATCCCATTCGTATGTTAGCAAATATA 24614 47 100.0 30 ............................................... AGGGTCTGGATATTGAAGAACAAAAACTGA 24691 47 100.0 30 ............................................... TGAATATGGAACAAGTGAAATTACCGCAAA 24768 47 100.0 30 ............................................... TAAGGAGGCAGATGAATACGAGAAGAAACT 24845 47 100.0 30 ............................................... ACTCTATCGGCGCTCAAACGCCGCGCATGC 24922 47 100.0 29 ............................................... TACCAATTACGAAAACACTATGAGGCATA 24998 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 17 47 99.4 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAAATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : TACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGAAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //