Array 1 117604-108424 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCOZ01000001.1 Corynebacterium striatum strain CSc27 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 117603 29 100.0 32 ............................. CTTGGCCGCAGCAGCAAGCTGCTGATCATTCA 117542 29 100.0 32 ............................. CTCGCGAGACCCTCGCGAGAGTTTCCGAAGGG 117481 29 100.0 32 ............................. ACGGGTATCCGCCACGGAGCGCGCCTATTCAA 117420 29 100.0 32 ............................. CCAGTCCACGCCGCAACAGCAGCGGTGACTAG 117359 29 100.0 32 ............................. GTGGCTAGGCACACGATCGCTGCCATCACAGT 117298 29 100.0 32 ............................. GCTACGGCCTGCGGACTGGGCCATATAGTCGA 117237 29 100.0 32 ............................. ACCCTTCATGGTGCCAGCCATGCTGGTCACAG 117176 29 96.6 32 ............................T CCGTTTGGTTGGTCACCGGGGTTGGAGGTGGT 117115 29 100.0 32 ............................. TCGCGATTAGCGCCCCTGGCGACGCCGAGGTT 117054 29 96.6 32 ............................T CACCCTCGACCGATACGACAACACGGAGAACA 116993 29 100.0 32 ............................. CGACTCGCCAGATTTTGTGGCGTTGAAGCAAC 116932 29 100.0 32 ............................. GTTGGGAATCCGACCCGGCACTAAACCACGAA 116871 29 100.0 32 ............................. CACTCTGCGGCGGTGGACTGCATTTCCTTAAC 116810 29 100.0 32 ............................. GGTAAGACCTACACCCTCCAAGTCGGTATCGG 116749 29 100.0 32 ............................. GCGATCGAGAGGTTGCGTTCGCTTGCTGAGTT 116688 29 100.0 32 ............................. TTTCAGGCCCGGTCCAACGAATCCTGAAAGGA 116627 29 100.0 32 ............................. AAAAAGGAGATGGGTGAGGCTTGGAAGAAGCT 116566 29 100.0 32 ............................. ATCTAATGACCCAAGAAATCGCGAAATTCAAC 116505 29 100.0 32 ............................. CACTCACTATGTGTTTCCTGCATGCCCGAAAG 116444 29 100.0 32 ............................. CTGGTTCACCCAACTCGAAGACCAAGTGCAGA 116383 29 100.0 32 ............................. ACACCCTTTTAAAATGCGCAAGTTGTAATTAC 116322 29 100.0 32 ............................. GACAGTCCACCGTGGATGAGCTCGGCAACGAC 116261 29 96.6 32 ............................T ACCGAGTAGTCGCCGCCCTGCGCTGCCATCGT 116200 29 100.0 32 ............................. CACGCGTTTCCGCGTGCGTGAGGATGCGCTCA 116139 29 100.0 32 ............................. GAGTAACCCGAAATGACTCAAATCGACGCGCA 116078 29 96.6 32 ............................G TCTCGAAGCTGGAAATGCAGCAGAAGATGAAC 116017 29 100.0 32 ............................. CAGTCTCGACAAGAGTCACGCCAAGGGTGGAC 115956 29 100.0 32 ............................. CGTTGGGTCTAGCTTTGCGGTCATTGTGGCTC 115895 29 100.0 32 ............................. GGCCCGGCAGAGCGCGTCGACGGCGAGGAATC 115834 29 96.6 32 ............................G ACAAGAATGCGAAAAAGGTCCAGGAGGCACAG 115773 29 100.0 32 ............................. GGTCATTTCTTCTCCCTCATGATGTTGTTTAC 115712 29 96.6 32 ............................G CAGATGGTCGGATACGGCTTCACGGAGGGCCA 115651 29 100.0 32 ............................. CGGCATAGTAGCCATAATTGCCCTCCTTTCGA 115590 29 100.0 32 ............................. CTGCTGCGGGTCGAGAATCGTTTGCCCCACTA 115529 29 96.6 32 ............................G TCATGGGCGACAAGAGGCGCCCCATGTGGCTT 115468 29 100.0 32 ............................. GCCTACCGAGGCAGCCGGGATGAGCTACGTGC 115407 29 96.6 32 ............................T TCCGGTTAGCTCGGAAACATCGAATTCCACGG 115346 29 96.6 32 ............................T ACTCGGTCCCGGTAGGTGCCGTCATTGGTGCG 115285 29 96.6 32 ............................G CTGAAGGAGATCAAGTTTGCGACCGGTGGCAT 115224 29 100.0 32 ............................. GTCCTCAAGCACCGGCCCGAGTTGCTCCGCAA 115163 29 100.0 32 ............................. CAAGCAGGCTATTCACGCTGCTGTTGTGGAGC 115102 29 100.0 32 ............................. CGCCCCGACATCCTCGACCCGGAAAACCAGTA 115041 29 100.0 32 ............................. GGTGGTGTGCTTCGCTCTGGTCGTTTGGCGTT 114980 29 100.0 32 ............................. AGATTCTTGAGGCACGCGGCTACACAGTCGCC 114919 29 96.6 32 ............................G GGCTGGTGGCGTCGTCCCCTAGGTCTTGGTAA 114858 29 100.0 32 ............................. CTTGTCCGTCGACTAGCTCCACCACCTGGAAG 114797 29 100.0 32 ............................. ACCAACCGCAAAGAGCGGTTGGTGAGCTAGTA 114736 29 100.0 32 ............................. AAATCCAACCGACTACTACGCCACATCAAGGG 114675 29 93.1 32 ........................T...G TCCGCGCTCACCGCGACCACCCCGGACAAGAA 114614 29 100.0 32 ............................. TTCACAAAATTCTCTTGGTCTGGATGCGCGCT 114553 29 100.0 32 ............................. TCCAACATCGACGCGCACATCATCCGGAGATA 114492 29 100.0 32 ............................. AATTATCGGCACCGCAGAAGCAGCCAAGCTGT 114431 29 100.0 32 ............................. GCCTGACCAGTAACGACTCGACATTGTCACGC 114370 29 100.0 32 ............................. GTGGCTAGGCACACGATCGCTGCCATCACAGT 114309 29 96.6 32 ............................T TCTCACGGTGCCCGCTGCCATGTCTGCCATCG 114248 29 96.6 32 ............................G CTACGCCACCGCTTCGGTAGCGTAGTATATGA 114187 29 100.0 32 ............................. CGTGGTGAAATTTCCATGGATGAAGTTCACGC 114126 29 100.0 32 ............................. CCGCCGCTTGGAATGACCGGATCCACACCGGC 114065 29 100.0 32 ............................. GTTCATTATTACCGTTCCGAATAGAGTCCTGA 114004 29 96.6 32 ............................G TGGACCACTAGCGAGTTCGTGGAGCGTGGCAC 113943 29 100.0 32 ............................. GCCGAGGAAGCCGAGAACGAGGAAGCCGAGAA 113882 29 100.0 32 ............................. CGCGGGACCCTGGACGTGCCGTCCGTACTGCA 113821 29 100.0 32 ............................. CGAAAGTCGCAAGCCCAATTTTCGGTTAATTA 113760 29 100.0 32 ............................. TAGCCGGCACGCCGGTCGCCAACGCCCACGCC 113699 29 100.0 32 ............................. GTGAAAGAAAACGTGGAATCGCTACCAGGGAC 113638 29 96.6 32 ............................G GGCGTATGGGCCTGGATCCAAGATCTCATCGA 113577 29 100.0 32 ............................. GCTTTCGATTTCGACTGGGCCTTGGGTGATTC 113516 29 100.0 32 ............................. AGTCCCAGCCACAACCGGAAAGAGAGTCCGAA 113455 29 100.0 32 ............................. ATATCGCGCATCCAGTTCCACTTATCGACAAG 113394 29 100.0 32 ............................. TACTCGACGCTGCAGGCTTCGCACCACAACGC 113333 29 96.6 32 ............................G TCTGTGTCGTGGGGTAAGGCGCAGGATCTTTA 113272 29 96.6 32 ............................T ACTCCACGCAGTGCCAACAGGGCGGCTTCCAG 113211 29 96.6 32 ............................G TCCATGGGCTAGCCCTAATCACCTCTACAGTC 113150 29 96.6 32 ............................G TGTGGCGCGGCGCTCCCGCTCATCCCCGTAAA 113089 29 100.0 32 ............................. TTTCAGGCCCGGTCCAACGAATCCTGAAAGGA 113028 29 100.0 32 ............................. AGGTTGCCCTCACTATTGCGAAACGACGACGA 112967 29 100.0 32 ............................. CCACTCGCCAGCATCCACTCGAGCCGTAGGAC 112906 29 96.6 32 ............................T CCCATGTGGCGGTGCGGGTGCGGATTGAAAGA 112845 29 100.0 32 ............................. ATCTGCGGTCTTTTCCACGGTGGTAATACGAC 112784 29 96.6 32 ............................T AAACAGGATGAAAAGATTAGCTCGCTTGAATC 112723 29 100.0 32 ............................. GGCGGCCCGTGGGGAGGTCACACGGCTGGCAC 112662 29 100.0 32 ............................. GGAATCAAGAGAGGCAAGAAGTAATGGCACGT 112601 29 100.0 32 ............................. CCTAGCGAGGGCACCACTGTGACGCAGCAGGT 112540 29 100.0 32 ............................. CCCCAACCGCAGCGCGGTCAGGGGCTTGTGGT 112479 29 100.0 32 ............................. AGGCCGCCGCCGTTCGCAGCGTCCACATCAAG 112418 29 100.0 32 ............................. ACCCGCCGGACTCCACGTTGACCACATTCGCG 112357 29 100.0 32 ............................. ACAACCGACGCAACCTGCATAAACGCATCAAA 112296 29 96.6 32 ............................G CTGCCCTGCGTTGACCCAATCGCCCTGCTTCA 112235 29 100.0 32 ............................. CCAGAGCGATCAAACTCACGCTCAATAAACGC 112174 29 100.0 32 ............................. GATAGCAGCGATCCTTATAGGTGCCGTCCGTG 112113 29 100.0 32 ............................. TCGACTGGGCAAGCGACCTCACAGACGAACTC 112052 29 100.0 32 ............................. CGCGCTGGGGTGGGGACGTGGCACGCGGGCCG 111991 29 100.0 32 ............................. GAGGCATGATGACTCGCACGCTTCAATGCATT 111930 29 100.0 32 ............................. AATGCACAGCTGCTGTATTTTGTGCTCATCTC 111869 29 100.0 32 ............................. CCGGCCATTCGTTCGCGGCCTTCGCCTTCCAG 111808 29 100.0 32 ............................. CGGCGGGCGTCTCGCAATCAAGCCACATGGGG 111747 29 96.6 32 ............................G AACAGCCGTGGTGGCTGCGCTATAAAGGCAGC 111686 29 100.0 32 ............................. TCACGCGGGAAATAAGTCCCCCGCCCGGCATC 111625 29 100.0 32 ............................. TAATGGATAAATACCAGCTAACACTGACCAAC 111564 29 100.0 32 ............................. TAGGGCGGTGATGAAGTATCCGATAGCGCCAG 111503 29 100.0 32 ............................. TCGTCCTAACCCCCCAGTTCTTCAAGCACATT 111442 29 100.0 32 ............................. ACCACTGAGACCAACGAGCTCAGCAAGACTGA 111381 29 100.0 32 ............................. TTCGAGTTCAAGCAAGGAATTTCAACCATGAC 111320 29 100.0 32 ............................. TACCCGCTCGGCAATCAAAAACCCGCACTGTG 111259 29 96.6 32 ............................T ATGCATCACCCCGCACCAAAGGCACAATCTTC 111198 29 100.0 32 ............................. GGCTTAAGCACTATCAAGAATTATCGGATTCG 111137 29 100.0 32 ............................. TCGTCGTCCGCAGCCACAGCGACATCGACCTA 111076 29 100.0 32 ............................. CGTCTACGTTGCTCCCAGGTGTAGAACAAGGG 111015 29 100.0 32 ............................. CATTTTTGCGCCACTCTGATAGGCGAAGCTGT 110954 29 96.6 32 ............................G ACATGGCCGCGTAAAGCTTCTACTGATACTGG 110893 29 96.6 32 ............................G TTGGAGCAGACAACATAGGCCGGCATGTGCGA 110832 29 100.0 32 ............................. TAGCAAGCACCTCAACGGTGGGCGTATGGTCA 110771 29 100.0 32 ............................. CATATGACAATGCCTAACCCACGAACCAGAAA 110710 29 100.0 32 ............................. CATATGACAATGCCTAACCCACGAACCAGAAA 110649 29 100.0 32 ............................. ATGCAAACCAGCCGGGGTCTCCACATCAATCC 110588 29 100.0 32 ............................. ACCCTGTCACCAACCGCCATATCCAACACCTG 110527 29 100.0 32 ............................. GCGCTGACCCACGCCCACTTCAGGAATGATGT 110466 29 100.0 32 ............................. CAAGCAGTGATTAACACGGTTTCGGAGCGAAT 110405 29 100.0 32 ............................. AGCCCGCCGCCGTGCTCCGCGTCCACATCGAG 110344 29 100.0 32 ............................. AGGGCGCGTAGTTGGTCTCGCGTGCCGCGGTA 110283 29 96.6 32 ............................G TACTCGCCCACCTGAAAGGAACCACCAACGCC 110222 29 96.6 32 ............................G CTGTACCGGGCACTAGCCCCGCACCTCATTAA 110161 29 96.6 32 ............................G TCAACCTCGGGCGCGGCCGCATGAAAGAATCT 110100 29 100.0 32 ............................. CCAGTGCCCAATAGCTCGACACTTGCGGGGTG 110039 29 100.0 32 ............................. CAGCAACCCACAATTGATACTCATGGTGTCGG 109978 29 100.0 32 ............................. GGTTCAGTGAGATCACAGAATCAATATCAAGG 109917 29 100.0 32 ............................. AAACGCGCCGCTGAGCCCGGACAGAGCACCTG 109856 29 96.6 32 ............................G GCATTAGTATTCACCGCGTCTAATGAGGGTTA 109795 29 100.0 32 ............................. AAAGTATCCTCAACCTGCTTGTTGAGGAAGTT 109734 29 100.0 32 ............................. CCATCGAACACCCAGCGGCCAAGGTGGAGCGT 109673 29 100.0 32 ............................. CAAAGACCTCACACCCGGCTCTATCTACCAGA 109612 29 96.6 32 ............................G GAACGGCGGCGTCGGCATGGTGGCACGACATG 109551 29 100.0 32 ............................. GGCTGGGCCCAGCGTCAGGCTACCGGGCGTCC 109490 29 100.0 32 ............................. GACAGCGGGAAAGGGGCCGCGAGAATCTCCCA 109429 29 100.0 32 ............................. CATCGGAACATATCCGCCGGCGATTTCACGGA 109368 29 100.0 33 ............................. CCGTTTGCAGTCACGAAATACGACACCAAAGTA 109306 29 100.0 32 ............................. AGTCCGACTGTGTAATTATCGACGAGCCGTGG 109245 29 96.6 32 ............................G GATTCGCGTGAGGAGCGTATGCGGATTAGTCC 109184 29 100.0 32 ............................. GCGCCGAGCTCGTGGCTGTCCGGCTCGCCGGG 109123 29 96.6 32 ............................G TTTCATCCTGAATAGCGTATTCGGGGTTGCGG 109062 29 100.0 32 ............................. AACGCCTAGCCAAAGCACGAAAGGCAATCCAA 109001 29 100.0 32 ............................. TAGCCCGCACCGACTACGCCGGCCAGTTCAAA 108940 29 96.6 32 ............................T CGCTAGGTTGATAACCGGAACGTGTCGGTTAC 108879 29 96.6 32 ............................G CTCGGCGCGGGCGATACCCGTCTAATCGTTCC 108818 29 100.0 32 ............................. GCATCAACCGCGAAGAACTCAACCAACGCACC 108757 29 100.0 32 ............................. TGACGCCGGACGGCAAACTGAAGTATCACACC 108696 29 100.0 32 ............................. TCCAAGAGAACGGCCAATGGCACCAAGTCACC 108635 29 100.0 32 ............................. ACACTAGTATGGCGATGCCAGCACCCAATACA 108574 29 100.0 32 ............................. TAGCCGCTACCATTCCACCTGCCATGTGCCCG 108513 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCCGCCGCT 108452 29 89.7 0 ................T.....A....G. | ========== ====== ====== ====== ============================= ================================= ================== 151 29 99.1 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGTCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : TTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATACGAGCAATCCCCATTTATGTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACGTTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGTGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGGGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 43038-45142 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCOZ01000006.1 Corynebacterium striatum strain CSc27 Scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 43038 29 100.0 32 ............................. ACACTTTAACCGCTAGAAAGGACGAATAATGA 43099 29 100.0 32 ............................. GAATTTAAGCTGTCTGGTAAATCACCGGGTGC 43160 29 100.0 32 ............................. GGAATTTACGAGTGCCTTGAAGCGCACACATC 43221 29 100.0 32 ............................. CTTGCGGCCCTTGCTGCGGGCGCGGCGGTTGG 43282 29 100.0 32 ............................. GTGGCTTTGTTTCCCCAATTCACGCCTGTTGG 43343 29 100.0 32 ............................. TCGTCGAGGTTTTGAGGTTGGGGGGATTTATC 43404 29 100.0 32 ............................. TTGGTCACCGAATCTTTTTCAAGAAGCAAGAC 43465 29 100.0 32 ............................. CGCTTCAAGCGTGACATGCCAGAGGGGGCGAG 43526 29 100.0 32 ............................. TGGAATATTTGAAAGTAATGCCACCAGGAAGA 43587 29 100.0 32 ............................. AAATCCCCGGACCCATTGACGCAGCAGGGCCG 43648 29 100.0 32 ............................. AGTACTGTGCACCCGCACCACCACCATCATGC 43709 29 100.0 32 ............................. TATTGAGGTCCTAGCGGGGCACATAGAGGGTC 43770 29 100.0 32 ............................. GTGCGAGCCCTTACGCAGCACCTCGGTTGCCC 43831 29 100.0 32 ............................. ACCCCAACCGGCAACGGCCACTACGACCAACG 43892 29 100.0 32 ............................. GAGACCTGGGAGCTTCTCGAGGTCGAGGGCAC 43953 29 100.0 32 ............................. AAGGTCAACACCCCACTGTTGCAAGGTTTCCG 44014 29 100.0 32 ............................. GTGTAGGCCAGGTCAGCGGCCAACGGCAGATG 44075 29 100.0 32 ............................. TACAAAGATTTAGGAATTAAACGAAGTACACA 44136 29 100.0 33 ............................. ATGTCCACGCACAAGGTAGAAGCTAGGGCAGAG 44198 29 100.0 32 ............................. AGTGATTGGGTGCAGGTGCGCAGCCTTACCGC 44259 29 100.0 33 ............................. TAGAAAAGTTCATCGGCAGACTGGATAATCCCA 44321 29 100.0 32 ............................. AACGTGTAAACATCCTCGATGTCGACGCCTTC 44382 29 100.0 32 ............................. ATCGTAGCCACGGCGGCGCATTTCCACGGCGG 44443 29 100.0 32 ............................. TGAAGTGTCTTTCTCTAAAGCGGGCGGCAGAG 44504 29 100.0 32 ............................. TAAAAGTCTCGATTGGAGGGAAAGACATCGTC 44565 29 100.0 32 ............................. AACGCTACCAGCGTCTTAGTCTCGCAGCGTGT 44626 29 100.0 32 ............................. ACCCCAATGTCGGCGCACGAAACGACGGAGCG 44687 29 100.0 32 ............................. TTGGCGCGCCTCGTCTCAGGGGCTACTAGCCC 44748 29 100.0 32 ............................. ATCGACACTGCCCAGCAAGCGACGCCGCCGAG 44809 29 100.0 32 ............................. ATCATTGTGGAACTTCGGGAAGATGGGGACGG 44870 29 100.0 32 ............................. GGCCAAGTCGATACAGACCTTTTGTCCGCTGT 44931 29 100.0 32 ............................. TCCACGGCCCCGACGTAGAGGTCGCACTCCGT 44992 29 100.0 32 ............................. TTCGCCAACTGCGGCGCGGCCTTAGCCAAAGA 45053 29 100.0 32 ............................. GGTTAAACGCCCGCGAGCTTTGCCTCGTCCTG 45114 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 35 29 100.0 32 CTCTTCTCCGCGCACGCGGAGGTATTTCC # Left flank : TAAGGAAGCAACTACGCCGGGAGATCCATCGGAAGAACTTACTCGTCGACATGCTGGAAGTTCTCACAGAGGTACTCACGCCCCACTTACCTTCACGTGATGACGATCGACTCGTCTCTGGGCGCGGCGATGAAGTCGCCGGACACACACAATATGGACGGCGCTGAATGTTTCTTGTAATCACAACCACCAGCCTCCCAGACCACATGCATGGCTACCTTTCGCGTTTCCTTTCGGAAGTAGATACCGGTGTTGATGTAGGAAACGTTTCCCGTCGCGTCCGCGATAACCTGTGGCGACGGCTTTCCAATGCCATCGCCGACGGCAGCCTAACCATGATCAACGAGGACCGGACCCGCGAACAGGGCTTTGCAGTCAACACTATGGGACCGCGACGCCGTACAATCATTGACATGGACGGCCTTTTACTTGCGTGCACGTTTTCGCGAGAACATACGCAAAACCGCACCGAGACAAACTAAAGTTGCTGTTCAGGAAGT # Right flank : CAGGGGGCCAGGGCGCCGCGCCGTGGTGAGTGAAGCGTCCTGGGTTTAGTTCCTACCTCAGCTAAGGAAGGATTGAACTATGCCTAGAAAGTATTCCGTCGAGTTCAAGGAGAAGGCGGTCCATCAGATCATCGAAATGGTCCGCCTGGAGTCTTGCTCACTGCAACGCGCCTATACGGAGGTCGGTGAGCTCCTTGGAGTATCTCACCACACGTTGCGGGCTTGGTACCGTGACAGCGCTTCAGTACGTGATGACTCTGACGCTTCAGGCGGCGAGACAATGGAAGAAGAACTCAGGCGTCTGCGCCGCGAAAACCGCGAACTAAAACGAGCAAACGGGATTCTTAAGACAGCTTCGGCTTTTTTCGCAGCGGAACTCGACCGAGCCACGACCAAATGATCTCCTACATCGACACGTATAAAGATCAGTTTGGGGCCCGGGCCCATCTGCCGAGTTTTAAAACAGGCAGATCGTGGATTCATTACTTCACGTGGCTACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //