Array 1 5365913-5368640 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABSWM010000001.1 Clostridium beijerinckii strain DJ037 Ga0423220_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 5365913 28 100.0 36 ............................ TTGCAAGATCAACTAAACAGAAAGCTTAGCGATTTT 5365977 28 100.0 37 ............................ GAAATATTATCAGTAATAGGTGTCATCATATCGGGAG 5366042 28 100.0 36 ............................ GTAATTACCACTAAAATAAAGCTAGGAAATTAACCC 5366106 28 100.0 36 ............................ ATTAATACTGAGTGTTATGATTTTCCCTTGTTGCGT 5366170 28 100.0 37 ............................ TAGATACATTAAGTTCTAAAAGCTCAACATCAGATTC 5366235 28 100.0 36 ............................ TTTAGTGCTTTTATAAAGTCAGATTCAACTGTTTCT 5366299 28 100.0 37 ............................ ACAGCAATTGCAAATGGTATTGTCATTTTTAAATCAC 5366364 28 100.0 36 ............................ TGGTATTTAACATATGGAATTAGATGTGGAAATAAC 5366428 28 100.0 37 ............................ TGGAATAATAGGGGGTAGCCCGTAGGGGGCTCCTTTA 5366493 28 100.0 36 ............................ ATTAAGAATTGGATATAAAGATTACATTTTAATAAA 5366557 28 100.0 36 ............................ TCATCAAATATTAGTGTTTAATTTCATTCGTAATTC 5366621 28 100.0 36 ............................ ATGATTGACCCAATTTCGATATACTCATAACAAATG 5366685 28 100.0 37 ............................ GATACTAACACTGTTCCAAATACTGATGATACAACAG 5366750 28 100.0 36 ............................ TAATATCAGGGTGTTCTTTTCTGACCCTTGCAATAT 5366814 28 100.0 36 ............................ GAAGAATCAAATAAATTATATACATCATAATAATGT 5366878 28 100.0 36 ............................ GTGAAATGCGAATAAGCCACTGGATAGCCAGTAGCC 5366942 28 92.9 36 .....GC..................... GGAGCAATAAGAAGAGTTGTAGATTGTATAATTCTC 5367006 28 100.0 37 ............................ TTCATCCTGTTGCTTGGATAATTCTTTTTGCAAGTCT 5367071 28 100.0 36 ............................ TTCAACATATAAGGTTCTTTACTAACAGGAGTAACA 5367135 28 100.0 35 ............................ ATGTATTTAATAATAGTGACTATTCATGTAGGCCA 5367198 28 100.0 36 ............................ TTATCTATAGTATATTCTTTTACCATGGTAGCCCTT 5367262 28 100.0 38 ............................ TCATCTGGATCTTGCGCGAATAGACCTATTTCACAAAT 5367328 28 100.0 35 ............................ TCACTATCAGGAGTTTGAGTAGTACTTGGAAAAGG 5367391 28 100.0 36 ............................ CTAAATAAAGTAATCATTTAAATAAATTCTCCTTTC 5367455 28 100.0 36 ............................ TTGAACAAATCTAGCATCAACATCAAGTATTTTTCT 5367519 28 100.0 36 ............................ AGCCTTAAGACAACAGGAGAAGTTCATGATGTGCCA 5367583 28 100.0 36 ............................ GATTTAATTTTAGCTGGTGCGCTAATTTTTGCATTG 5367647 28 100.0 38 ............................ GAAGACAGACCAGAAAATCCAATTCAAGGTGCTGATAG 5367713 28 100.0 35 ............................ AGTGTAAAAGACATGGCTTATCTTACTGCATATGT 5367776 28 100.0 35 ............................ GATATTCTTTAGGAAGTTTTAGATTAGCTGAATTC 5367839 28 100.0 35 ............................ GCCATTGAAGCATTATAAAACTCATTTCGACTTAT 5367902 28 100.0 37 ............................ CTTTTAAACGAATAAGTCGCGACATCGCGAAAAAATG 5367967 28 100.0 36 ............................ ATGCAAACAGTCTTTTTAGCCAAGTCTTTAAGTGAA 5368031 28 100.0 36 ............................ TTGTTAATCCAGGAAGCTTATTTGAGGTCAATTTAC 5368095 28 100.0 36 ............................ ATTGTTATGGCGGCTAAGAAAGCTGATGAAGATGGT 5368159 28 100.0 37 ............................ TGTAAATTAGCTGGTGCAATTCAATACGTTAATATCG 5368224 28 100.0 36 ............................ ACAGGAAAAGACGTAATGAACAGTATGGAAAATACT 5368288 28 100.0 37 ............................ AAAATTAAAGGTGCAGCCTTAATTAGAGGATCGGCTT 5368353 28 100.0 37 ............................ CGATAATCACACTCTACTTGTTTTATATCGCTTGTAT 5368418 28 100.0 37 ............................ TTGTTTCCGTTCTAGCTACTTTTATGGCTCTATTTCT 5368483 28 100.0 37 ............................ AGTTTGGGATATGATCTTAGTGTGTTAATTACTTTTT 5368548 28 100.0 37 ............................ TTAGCACAATCTACTGATAATACTTTAAATAATACAA 5368613 28 96.4 0 ......................C..... | ========== ====== ====== ====== ============================ ====================================== ================== 43 28 99.8 36 GTTTTATATTAACTAGAGGAATGTAAAT # Left flank : ATTAAGCATCTAATAAAAGATGAAAAATATAAGCCATTGAAAGCTTGGTGGTAATGTGTTTGTAATAATTACTTATGATGTTAATGAAAAAAGAGTAAATAGAGTTAGGAAAGTCTTAAAAAAATATATAACATGGTGCCAAAATTCAGTCTTTGAAGGAGAAATAACTGAAGGAAAATTAACAAAATGTATGGCAGAAGTTAGGAAATATTTGATAACTTCAGAAGATTCGTTATATATTTATAGAATTCCTTATAGTAAAAATATAAAAAAAGATGTTATAGGTATAGAAAAAATCTCAGATGATTTATTTATATAATTGCAGTAAGCGATCTTTATTATAGAATCAATTCAAAGATAGAATTTAAGCAGGCTTTAGCCACTTTTGTTTAAGAAATGAAAATCACTACTGTAGCTTTACTGCAAAAATTTATGTTATAATATAAAAAATATTATCTAATGTGGCTAATATAGAGGGGTTTACCTTATGTATTTTTGGG # Right flank : TACGCAATCGAAAATAATTAAATAATTTTAAAAGCTTATAAATAACCAAGATTAGTTGCCACAAATCATAAACAATAACTAAAATTAAAGAAAATTTAAATTTATTTAGATTTTATGTTTACAAAATGGAAGAAAAACTTCTTTAAGTATATATAAGGCAAATGAGTTAGCTAACCTCAAAAGCTTAATTAAAATTATTTTTATATTTTAGGAGGCAAAATTATGGGTTATTTAGGAATTAACATGTCAGGATCAAGTATACCAGTATATTCTACAAATATTGAGGATAACACAAGGATAGGAAGTTTGGGATACAAAGAACGATTTGCAGTTACAAGCAGTGGACCAATTGCAATAGTTATAAAGTTTGTAAATTCTTCAGGAAATTGGGTTGATGGTAGACTGGATGTAAATGCTGATATTAGCGATTGGTGTGAATATTTATTCGTACCAGGTGCTATAGCAGCAAGAGTATTTCATACAGATAGAACAATAGATAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //