Array 1 191646-193138 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRCQ01000003.1 Aggregatibacter kilianii strain PN_452 NODE_3_length_367003_cov_66.9244, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 191646 32 100.0 34 ................................ AAATACCGGTGCATCGAAAGGCAACGGTTGAACA 191712 32 100.0 35 ................................ CTACTCTGAAGATGAGCTGTATTTGCTACATCAGT 191779 32 100.0 34 ................................ ATCAACCATTGTTCGGCTTCGTTTTCTTGTTCGT 191845 32 100.0 33 ................................ GAGACTGCAAGAAGGATGGTAAACCGCACGGCC 191910 32 100.0 35 ................................ ATTAAAGACCGCATAGAAACAACTTTTTTGATGTC 191977 32 100.0 34 ................................ GGGAGGGCTTGCGGAAAATAAGGTAACCGAAGGA 192043 32 100.0 35 ................................ TTAACGCTCACATCTGTGACAATGTCGCGTTTTAT 192110 32 100.0 34 ................................ ACCAAAATCATCAGATTTAACTTGATTTTTAAGC 192176 32 100.0 34 ................................ CATTTTTGGCAAGCCAAAAATAATTAGATTTAAC 192242 32 100.0 33 ................................ ATCCGGTAAATCATTATAAAAAATATAGTCTGA 192307 32 100.0 34 ................................ ACTGCCAAATTGCTTAAGGCCGCCGTAAAGTTTA 192373 32 100.0 35 ................................ TTAATAACTTTTACGGATATATCCCCATTGGCTTG 192440 32 100.0 35 ................................ TTTTAAATCCTTACTAAGTAAGTCATTAAAATACT 192507 32 100.0 36 ................................ TTTTATCACTTACAACTATCCATTATCATCACAAAT 192575 32 100.0 35 ................................ TTGTTGAGCCGTCGGGTTGTAACATAACGCATAAG 192642 32 100.0 34 ................................ ATTGGAACAACAAACGAATTCTCTATCCAAAGCC 192708 32 100.0 34 ................................ GTCATTATGCACCCAACAACGCACTGCCGCCGTA 192774 32 100.0 34 ................................ GTTTGATGAATACCTTGAATTTATTGCGAAGAAA 192840 32 100.0 36 ................................ GCCAATCCTCGTCAAGCCGTCCGTATTTTTTGACTA 192908 32 100.0 35 ................................ CGGAGTCAACCCCTTGATTTTGAGATTATCGTTAC 192975 32 100.0 35 ................................ CCCGATTTTTGGACGGAAGATTTTAGCCAATGCAA 193042 32 100.0 33 ................................ AGCTTAAACAGCGTGATTTTGTTGAGGGATTTG 193107 32 87.5 0 T.........T..G.T................ | ========== ====== ====== ====== ================================ ==================================== ================== 23 32 99.5 34 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAACTATGTTAATGCTAATTACTTATGATATTTCTTTTGACGATCCTAATGGTCAAGCGCGATTGCGCCGTATCGCAAAACATTGCTTAGATTACGGGGTGCGAGCACAATATTCGGTATTTGAATGCGATGTCACGCCTGACCAATGGGTTATGTTGAAAAACAAACTGTTGGAAACCTACGACCCCACATGTGACAGCCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGCGCAAAACCGGCAGTGGATGTGTTTAAAGATGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATTGGGTAGCGATCTTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACAATGTGGCCGTTATACTTACCAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATACACTGATTTTTCTTGCTTTTTTATGTAGGGA # Right flank : CCCTTCGTGGCTTAATGGAGATTGTTGGCATTCGTGTCAGCTGCCTTCGGGTTAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTTGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACCGCTCTTTTTGTTGACCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGTAGGTCTTGAATATCCGATTTCAATACATCAGCTTTTGGCCCGTAAATGGCTTGAATGCCTGTGCCTTTAACAATGAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCACCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCTACCTCGGCAATATTGTTGCGTCCACCGAGAAGATTGATGATTTGCACCACTTGCGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //