Array 1 82998-78829 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041652.2 Streptomyces sp. RLB1-9 plasmid pRLB1-9.2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 82997 28 96.4 33 ...............A............ GTCGAACGTGCCACTCACGGTGATGTTCTCGAT 82936 28 100.0 33 ............................ GATGAACTGTTCTCCGCCGAACTTGACCGGGAT 82875 28 100.0 33 ............................ GATGAACTGTTCTCCGCCGAACTTGACCGGGAT 82814 28 100.0 33 ............................ GGAGGCCGAGTACAACGCGCTCCGTGCCTACAT 82753 28 100.0 33 ............................ GTACGGGCTGTCGGGGTCGCGGAGGATCGCGGG 82692 28 96.4 33 ...T........................ GCACCAGAAGACCCGGGACGAAGCGCAGCGCAA 82631 28 92.9 33 ....G.......G............... GCCGTGCAGGCCGCAGCAGTTCCACAGCAGGGA 82570 28 100.0 33 ............................ GCGCGTCCTTCACGGCCGTCGCCGCTACGCCTT 82509 27 92.9 33 ..................A..-...... GGTGCGCATGGTCCACAGAGTGATTGCGCATCT 82449 28 100.0 33 ............................ GTGCCGCATGGTGAGCGTGACCAGGACCAGGCC 82388 28 100.0 33 ............................ GATCTCGCAGCGGCGGCGGCCTGCCTTGGTGGG 82327 28 92.9 33 A...............T........... GGTGACCGGGTCCATCTCCATCGTGCGGTCGCC 82266 28 96.4 33 .C.......................... GCTGGTGTACGACCACTGGGCCGTCGTGTGCGA 82205 28 100.0 33 ............................ GCGGGCTTTGAACCCGTGTCCGGTGTATCCGGC 82144 28 100.0 33 ............................ GTCCCACATCTCGTAGGGCTCCTCGACGACCGA 82083 28 96.4 33 ........T................... GTTGAGCTTGCCCTCGACGCTGAGGCCGCCGCG 82022 28 100.0 33 ............................ GATCTACCCGTGGCAGGTCCTCACCGAGGACCG 81961 28 96.4 33 ......A..................... GGTCCAGGACAGCGCGGACAACGTCACGTTCGC 81900 28 100.0 33 ............................ GAGCAAGGGGCGCACGAGCGCGTTCGCGCTCAA 81839 28 100.0 33 ............................ GGTCAGCAGCCGGATGCTCCAGCCGATGATGCC 81778 28 96.4 33 ........T................... GTGCCAGAGGTGTACGGCCGTCGGCGTCGTGCT 81717 28 100.0 33 ............................ GGCCGGGGCGATCCTCTCGGACAAGAACGTAGA 81656 28 100.0 33 ............................ GAAGTGAGCATGCGCGCCCTGCTCGCCCACCTC 81595 28 100.0 33 ............................ GGAGGCTGCGGTGCGGCTGGGCGCCAAGTCCCG 81534 28 96.4 33 ..................A......... GTACTGGATCGGGAAGACGCCGGTGTCGAGGCC 81473 28 100.0 33 ............................ GTTCGACGGGGTCACCGTCATCATCCACGGCTA 81412 28 100.0 33 ............................ GCCCTGGGACTACCACCGTTCCAGCCCGGACGA 81351 28 100.0 33 ............................ ACCAGCGTCCGGTGATTGACCGACAGACCGGCC 81290 28 100.0 33 ............................ GCCCTGGGACTAGCACCGTTCCAGCCCGGACGA 81229 28 100.0 33 ............................ GCGGGCGAGCATCGATCACCTGATGACGGTGAC 81168 28 100.0 33 ............................ GGGGTAGATGCCGCCGGCCTGGCTGGTCGGGCC 81107 28 92.9 33 ..............A....A........ GAAGGGCATGCAGGTCGTCGGGCCGGTGCTGCC 81046 28 96.4 33 ......T..................... GCTGTACGTCCTCAAGGCCACCGAGGGCGAGGA 80985 28 96.4 33 ...................A........ GACGTGCCGCGTACGGTCGTCGGTCATGAGCAC 80924 28 100.0 33 ............................ GTTCTCTCGGAAGTGCGTCGCCGCAATGGTCTG 80863 28 96.4 33 ......................C..... GTCCTGCATGTTGGCGTCCTGGACGACGATGCC 80802 28 96.4 33 ...G........................ GCAACGCGCGTACGAGGCACGGAAGCTTGAGCG 80741 28 96.4 33 .......................A.... GAGGGTGGGTGTGGTCACTGGCTTGCCCCCGTC 80680 27 96.4 33 ...-........................ GGTCACCCTGGACAGTCAGGGCGCGTTCTCGGT 80620 28 96.4 32 ...........................G TCGACGCCCGTAGTCGCGTAGGTCGGCGCGTT 80560 28 100.0 33 ............................ GCCCGCGTTCGACTTCGGTGTGCGAATCGTCGC 80499 28 96.4 33 ...........C................ GCCGTGGCCAGCGCCTGACCTGCGGTTATGGAA 80438 28 96.4 33 ................T........... GGATCTGACCTTCGGCCTGAAGACGATCCGCGA 80377 28 96.4 33 ........T................... GGTCGACCCCAAGGGCATCGCGACCGTCAGCGC 80316 28 96.4 33 .A.......................... GATCGAGGGCGACATCATGGACCAGTTCGCCCT 80255 28 92.9 33 ...........AA............... GGACTGGCCGTCGTCGGCGTCCGTGAAGATCGC 80194 28 96.4 33 .A.......................... GGCCTCACCACGATCGAACTCCACACCATGACC 80133 28 96.4 30 ....................A....... GAAGACGGAGGCCTCATTCGCCGACCTGAA 80075 28 92.9 33 .G.G........................ GCTCGGCGACGACGACGCCCGCGCGCTCTATGA 80014 28 100.0 33 ............................ GGCGGGCGCCGGGTTCGCGTCCCTGACCAAGAC G [79992] 79952 28 100.0 33 ............................ GTAGTAGACCGTCGAGTCCCACTTGCGGGTGGG 79891 28 100.0 33 ............................ GGAGGAGTAGAGGTCGAGGGCGGATACGCCGGT 79830 28 100.0 33 ............................ GCCTTCGACGGCTTCGTACGCGGGGTCGGTCGT 79769 28 100.0 33 ............................ GTCGTGGCGTGTCCCCACCAACTCCGCGATCCT 79708 27 92.9 33 .....................-.....T AACGAGGGACAGCGTGTACCTGACGCTGGTCCG 79648 27 96.4 33 ...-........................ GCGGGCGATCAGGGACTGGGTGCCGCGCACCCA 79588 28 92.9 33 ..TT........................ GTACTGGCGGCCGGGGAAGGCCGGGCACTTCGG 79527 28 96.4 33 .C.......................... GGGCCAAGTTCGGACGCTGGAGGAGCAGCCCGC 79466 28 96.4 33 ...........A................ GTTCGAGGAAGAGCTGGCCGACACCGACCTCGA 79405 28 96.4 33 .........................A.. GCCCGTGGTGGCGCCCACGTTGATACTGGTGGC 79344 28 96.4 33 ............T............... GGACGTCAAGCGCAACAAGCGGCCGCCGCTCCC 79283 28 100.0 33 ............................ GACCAGGTTCATGTGCTGAATCACCGGCCCACC 79222 28 92.9 33 ........G..................A GACACCAGTCCAGCTCAGAGCCGACGCGGAAGC 79161 28 96.4 33 ........T................... GCAGAATCCGCGGATCCGCGCGTTCCTGCTGAA 79100 28 92.9 33 .......T..................T. GTCGATGGTGCCGAAGCCCCAGACGCGCCCGAT 79039 28 92.9 33 ......T................A.... GTTGGCCACGATGTTCAGCGTGATGCTGAAGTC 78978 28 100.0 33 ............................ GCCCTCGACTGCCTGCTGCGCGCTGAGGCCGTC 78917 28 92.9 33 ......T.....T............... GCGGTTGGCGACCCAACCGGTGGACCAACCGGT 78856 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 69 28 97.4 33 GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Left flank : CCGCCCGCAGCCCACAGATCCTCCTGCAAAGCCGCGAACACCCCGACCCCAGCCGCCTCCCCGCCGGCTACGGCACCACCACCACCAAAGACATCTCCGCACTGATCAGCCTGCTCAGCAACGGCCTGGCCGTCCGCTACCGCATCGACGCCAACCCCATCCGCAAACCCGGCCACACCACCAGAGCCGCCACCGGCGCCAAAGCCGTCATCCCCCTGTCCGGCACCGACGCCGACGACTGGTGGGCACGACAGGCCGAAGAACGCTCCGGCCTCAAACTCACCAGCACCCACACCACACCACTCACCGCCGCCCGCGGCGAACGCCACCAGGACAAACACCACATCCGCCACACCCGCACCCGCTTCGAAGGCACCGCCGTCGTCACCGACCACACCACCCTGCAACAACGCATCCTCGAAGGCATCGGCCGCGGCAAGTCCTACGGCTGCGGCCTCCTCAGCCTCGCACCCCTCACCAACCCCGCAAGATAAACCACC # Right flank : GCCGCCGCGCCGTTGAAGGTCACCCGCCGACCGAACTCCAACCGGAGTGTCGGCAGACCCTCAAAGAAGTGCTTACAAACAGGGCGCCGTCCCGATCCTGACAACGACTTCGGCCTCAGCTCGCGTCATGCGGCGAAGCCGACGTTGGTGACGTACTCGTACTGGCCCCACTGCGACCCGAGGTCGACGACCTGGTCTACCCACGCGTCGTCGAGCTCCTGGTCGTCACCGGCCGCCCACGCGGCGACGATGCGGTCCCAGTGGCGGACGTTGAGCGTGCGGAACTCCACCACGCGCTGGCGGGGCCGGTCGACCTGCGACTGGTTGACCGGGTGGATCTCCACCCGAGTGCCGCGTCCCTCGCGGTTGAGACGGGCCAGGAGGTAGCGGGCGACGTTCTCCCGCCGCACTGTCCGGTAGGCCTGCTCGATCTTCTCCAGCGTGGCGCGGCGCGGGGTGATGGAGCCGTCACGCCAGCCCTTGAGCTGGGCCTTGGTCGG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 91469-92522 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041652.2 Streptomyces sp. RLB1-9 plasmid pRLB1-9.2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 91469 28 100.0 33 ............................ GGGTCGGCGGGCGCGCGCATGTCCCAGTGGACG 91530 28 100.0 33 ............................ GTTCATGTAGTTGGCGCCGACGAAGGCGGCCCC 91591 28 100.0 33 ............................ GGCGGGGTGGCAAATTCGAGCATGCGAGCTACC 91652 28 100.0 33 ............................ GGCTGCGAGAAGGTCTCGCCCGGCTGCGACAAC 91713 28 100.0 33 ............................ GTCGCTCATCCGGGACGGCAAGGCGACGTTGCC 91774 28 100.0 33 ............................ GAACGTTGCGACGGCCGCGGTACACCTGCTGAC 91835 28 100.0 33 ............................ GTCGCAGCTCGCGGCCACGATGCGCCCCAGATG 91896 28 100.0 33 ............................ GCACGAGGGCCGGCCGGGCGTGATCGTCGGCTT 91957 28 100.0 33 ............................ GGACGTCGGCGGCGTCCTCGTCGGCCTGGTGAA 92018 28 100.0 33 ............................ GGCGTACCGCATTCAGGGCGAGGTCCCGAAGTG 92079 28 100.0 33 ............................ GGTCAAGGAAGCCAACAAGCGCTGGCCGCACTA 92140 28 100.0 33 ............................ GGCGGTGTGACGATGTACCGACCGCTGCTGATC 92201 28 100.0 33 ............................ GACGGCCAACAACCCGTCCCGCCGTGGCCCCCT 92262 28 100.0 33 ............................ GTTGCCGGCCTTCACCTGGGCGTCCATGTCGGC 92323 28 100.0 33 ............................ GAGGTCCCCCATACGGAAGCCGCCTGCCAGCGC 92384 28 100.0 32 ............................ GCTTGATTCCGGGCTGTCTCCGGACGCCCCCT 92444 28 82.1 23 ...T.....A..............C.AA CTGGAGTACCTCAACGGGATGAA Deletion [92495] 92495 28 96.4 0 ..........T................. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.8 32 GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Left flank : CCTCCTCGGTCAACGTCATATCCCACAAGGCCCCCGCAACCGCCGCCGTATCCAGCAGATGGCAGATCACTGGATAGGAGCTGGTCAAGCCCCTGGCCTTTCCCCACAGCCTCGCATCTACCGCCGATGCCGCCATACGCCCCCCTATATCCCCTGCGGCACAATCGCCGCGGATACAGAGATAGCAGCCACCACTGACATTGATACTCATAAGTGGGTTTCCGGTGGTCGTGACTCCACCACTGACTGATGCCCTGCTGGGCTGTCCTCCGGTTGTTCTGTCCGGCTGCCGGGACCATTCTTCAGGGCTCCGGCAAGGTGGACGTTCAGCATCAACGCACCCCCGAGGTTCGGGATTTGTCGGCCCGACAGGGAGGGGGGGACATAGGTCGGCAGTAACGTAAGGCCACCAACACGGTCAGCCGGAGGTATCCCCAGTGCGGCGCAACGTTCTTGGTCAGGTAATCGCAAAGCGTTCCTAACGCTCCAGGTCATGAAGT # Right flank : CGAGTTCTTCGACTGGCGTAGTCGCCCTGGAATCAGGATTGCACCCGGCCTTGTGGCCGGGTCCGTTGTCAGTGACCGCCCGTAGTCTCGCTTGGGGACATGTAGGGATTCTGAGCCGGAGGCCTGATGGTCAGGGATTCACGCCGTGTGCAGACAGCGGTGCTCGACAATGCCGATTCCGAGGATCCAGTTGAACTACCCCTGGACGTGCCCGGGCTGGAGCTGTTCCGCGGTGCCCATCTGGGCCGCACCTTCTGGTGTGGGGTGTGGCTGGGCGGGTGTGGAGGCCAGCTGACGACCAGGCGCTGCGTCGACAAGATCTGCCACTTCGCCCACATGCCGGATCCGGATGCTCTCGATTCCTTGTGCCGCCGGACGAGTTCGAGGACATCTGGAACGGGCAGCGCCGACCACCTCTACATCAAGGCCGCCGTGACCGACTGGATGGCCCGCCGCGGTCTCAGGGGCGAGGCCAGCATCCTGCGGGATCCGACCGGTGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.90,-11.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1630590-1630106 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041654.1 Streptomyces sp. RLB1-9 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================= ================== 1630589 28 78.6 33 C..AC......CTG.............. GGAGGGACGCGATGAGCGGGCCTGCCACGCGCC 1630528 28 96.4 33 .......................A.... GTCTTCTGCTACACCGTCGGTTTCGTCCTCCTC 1630467 28 100.0 34 ............................ AGGCGGCAGCAAAGCCGCGCGAGTTGAAGCTTCG 1630405 28 96.4 33 ........T................... GCCGGACCTGATCCTTCACGTCCTGCGCGATGC 1630344 28 100.0 33 ............................ GCCGCTTCCCAGCATTCGACTCAGCCCGATTCC 1630283 28 100.0 33 ............................ GGCCATCACGTCGATGTCGGCGACGGCGGCGTT 1630222 28 96.4 61 .................T.......... GCCCGGAGAGCTCCTCGCTCCGAAGGGCTGACGCGCGGACGCCCAGGCCCGCTACGTTGTC 1630133 27 71.4 0 .C....A....A..C..TT...-....G | C [1630116] ========== ====== ====== ====== ============================ ============================================================= ================== 8 28 92.4 37 GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Left flank : GGAGTCCGGGGATCTCCTCGCCCGGGCCGTAGAAGTGCCGGAACCGCTGCCAGGGGACCTCGTCGTACCTGAACCCGTCCTTGACCTCCCGCGAGATCGCGCCCACGGCCGTCCGTACGTCGCAGTCCGTGCCGACCCACCGTTCCGGCCAGCCAGCCCAACGGTCATCGTCCATGGCTTGGCCTTCCAGTTCACCGACAGCATCCGAACCCCGGGAGTTTAACGACCGGTGATCAAGAGGCGGACCGCTTCTGCCGCACTCCGGTGGCACCGCACCACAGCGACGTCATTTCTCGTTCTCGTGAGCATCTGCAGCACTCAAGATCGCCATCTGCTGTCCAAACGCTGCTACTTCACGTGAACGAAGCCACCGGCCGGCTCACCCCCGCCTGCGCAGGGAGGACCGAAGAACGAAACGGCAAGAATTCCGGGACGACGGCTCACCCCCGCCTGCGCGGGGAGGACAGGGTCTTGGGAGGATCACTCTTTGTACCCGGCGG # Right flank : CAATGAAGGCCATCTGGGCACTCCTCACCCTGCTATTCGGCGTACTCACGCTCGGAGCCATTGCCAACGCCATCCAGTCGCTGACGGGCGCTGGAGCATCCGGCGCCCACAACAGCTACAGCATCAGCACCGGCATCATCGACGGCGCCCTGCAGCTCATCTTTATCGCGCTTCTCGCGCTTGCCACCAGAGCCTGCTATCGGCGAGCCTCACGCGGCAACCAGCCCCGCCCCGGCGCCGACAGGCGACCCTGGGAACGCTGACAACACAGCGCCCGCCCCAAGTTGGCTCGGGCGCTACGCGAGTTCCGGACCATCTCCCCAACGGTCCATGGTCACAACTGTGTCACCGCCCTCACCCCCCACTCACACTTTCTTCACACCACCCGTTACGGTCACTCCACCACGAACCATCCCTGGGGGGACCATGTCGTACAACCAGCCGCCGCCACCGCCCGGATACGGGCCGCCGGCCGCCCCTGCACAGCAGCCGCCCAGGCC # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCGCAGGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCGCAAGCGGGGGTGAGCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11420242-11419853 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041654.1 Streptomyces sp. RLB1-9 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================================= ================== 11420241 29 82.8 32 ..T.A......TGG............... CTGTCGATCGAGGCCCAGGCCCAGGGCACGTC C [11420235] 11420179 29 96.6 32 .......A..................... GGCTTCAACTTTCCCTGCTGGAGGATCTCGGG 11420118 29 100.0 32 ............................. AACACCCGGGGCCGTGACCCCGTAGACAGGTG 11420057 29 93.1 33 .............G.........A..... GCAAGGAGTCGGTCACCGTCACCCTGTCGCAAT 11419995 27 82.8 87 ..T........A......-..C...-... TCCTTGATATCGAGCGTGAGTTCCCCGTCTGTGTTCTCCTTCCTCAGCGGCGGAGGTGCCATTGGCGAGCATCTGCCCGTCGACGTC 11419881 29 79.3 0 ...........CG........T....AGT | ========== ====== ====== ====== ============================= ======================================================================================= ================== 6 29 89.1 43 GTGCTCTCCGCGCCAGCGGAGGTGGGTCG # Left flank : TCGACGCCGAGGGCATCGATATGGGCCCGTCCCCGGTGGACGCCGCGCTCGCCGCCGACCTGGTCCTGCCGATCGAGGAGCTCGAGCTCACCGTTCGTTCGTACAACTGCCTCAAGCGTGAGGGCGTCCACTCCGTGGGTGAGCTCGTCGCCCGCTCCGAGGCCGACCTCCTGGACATCCGCAACTTCGGTGCGAAGTCCATCGACGAGGTCAAGGCGAAGCTGGCCGGCATGGGCCTGGGCCTCAAGGACAGCCCGCCCGGATTCGACCCGACCGCCGCCGCACTCGGTGCGGACGACGGCGCGGACGCGGGTTTCGTGGAGACCGAGCAATACTGAACGCTGCGCTGCGCCGGTCGTAGAGACGCTTCGCGCACCGGCTCACCTCCGCTCGCGCGGAGAGCACGCGTACCTGGACCGCGTCTTCTGGGACCCGGTCGGTTCGCCTCCGCTCACGCGGAGAGCACCGCTGGTTCTTCACCGGCGCCCGCTCGGTCGGCG # Right flank : CCGCTGCTCTGCTCAACGACGAGATTCGTCTCCCTCGCCGCACGCACCGAGCCGTGCCATCAAGCGACCGGGTGCGTCGGCAAGCATGTTGTTGAGCTGCTGGACGCCCGGGAGCTGGTCTGGATCTCGTGTCCGCGGCCAAGATCCGGGCCATTCCCGGAGCAAGTCGCCAACCGCTGCCGACAACGCTCCCGTCTCCGCAGGTCAGAGCAGGCGCCTCGCGTGTATCACCATGAGACGCGGTGGCCTCCGGGATGCACGGGGCAGGCACAGGGCGCAGAGACATCACCGCCCTCCTTGTCTCCCAGCGAGACGGAACCCAACCGGCACCAGACTGCCCGACCAAACAAGATCACCAAAGGCAGTCGCCGAATCCGCCAAGACCGCGTCGGAGTGGACCACGGCGGCACCATCCATGTGGACAAATACGATCAGGCCCTGAAAGCCGCGCATCAGGCCGGCTTCCCCCTGTTCTGCAAACCGGCCTCACTGCCTGGACC # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.45, 5:-1.5, 6:0.25, 7:-0.97, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCCAGCGGAGGTGGGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGGTCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //