Array 1 1160694-1159403 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP040500.1 Lactobacillus paragasseri JV-V03 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1160693	    36	 100.0	    30	....................................	TAATGCTTCGAAATGTTACTATTCAGGTAA	
   1160627	    36	 100.0	    30	....................................	TAATTGATGAAAGGTACCATACAAACCAAT	
   1160561	    36	 100.0	    30	....................................	ATAGAAAATTAAAATACGAGAAGAATCACG	
   1160495	    36	 100.0	    30	....................................	CCATAAACGGATTAGCCATAAAGACTGCTT	
   1160429	    36	 100.0	    30	....................................	TTATTAAGCATATAACTAATCGGCCGTTTG	
   1160363	    36	 100.0	    30	....................................	CTACTCTTGCAAAGCATGATGCAGTCTTAC	
   1160297	    36	 100.0	    30	....................................	ATTGTTCTGGATTGGTTAAGTATGCCTTAG	
   1160231	    36	 100.0	    30	....................................	GTGGCACCTTGCCAAATTAACCCACCCATA	
   1160165	    36	 100.0	    30	....................................	GAAAATTGATACTGAGGCTACCCGTGCTAA	
   1160099	    36	 100.0	    30	....................................	GATCTTTTTTGCTCTGTACTTGATGCGCTC	
   1160033	    36	 100.0	    30	....................................	CAAGAGTAGATAAGCTAGATGGAGGCGCTG	
   1159967	    36	 100.0	    30	....................................	CAAGAGTAGATAAGCTAGATGGAGGCGCTG	
   1159901	    36	 100.0	    30	....................................	CTTACAACATTAAGACAAGCTTACATGGCG	
   1159835	    36	 100.0	    30	....................................	GGAGAATTAGCAATGGCGGGGTATCGTCCT	
   1159769	    36	 100.0	    30	....................................	ACATATTTAAAACCTTGTGTATTAACATCT	
   1159703	    36	 100.0	    30	....................................	AAAGAAGCTGGATTAATCAAATGAGGCTAA	
   1159637	    36	 100.0	    30	....................................	AAAAGCCTAAAGTGGAAAAGCCAATACAGG	
   1159571	    36	 100.0	    30	....................................	AATTTTAGAAATAAGCCAGTTCGAAGGGCT	
   1159505	    36	 100.0	    30	....................................	GAAGAAAAGAAAAAATCAGTTGCTGAATCT	
   1159439	    35	  94.4	     0	..........................A......-..	|                             	TA [1159409]
==========	======	======	======	====================================	==============================	==================
        20	    36	  99.7	    30	GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC	                              	       

# Left flank :   AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGGGCTTAATGAAGCGGATCGTAATGAAATATTAAAAATGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATATAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGGTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTGTCCGATTAAAAACTGATTATAAAATTTCG
# Right flank :  GTAATTACACTACTGGTCCATTGCTTTTGCAATGGGCCTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGAATAATTTAAAAACGACTAAGAATGTTTTATTAGTATGTGGTTTAAGTGCATCATCAGGTTTTATGGCTGCTAACATGAGAAAAGCATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCCGCCTTAATGTTGGTTTTCTTACTTAAAGACGGAGTTGGTACGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTGATTTTATGGATTACATGAAATTAGACAGGCAAAGAATCATTGCGGATCTTTTCCTCAGGGCGCGGTATTTATAATGCAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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