Array 1 195310-198323 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTZ01000001.1 Paenibacillus pabuli strain DB-3 Ga0227271_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 195310 33 100.0 33 ................................. CTCGCAGCTCAGAAGCAAGCAGAGGAAGACGCA 195376 33 100.0 34 ................................. ATAACTGGCGAAGGGCGGTGTGATGCGGGGAAGG 195443 33 100.0 35 ................................. ACCGTAGCCGTGGAAGCAGCTGCCAAGCGCTATGA 195511 33 100.0 35 ................................. CTAGATATGCTTGGTGCAATCTTCGATTGGACATC 195579 33 100.0 35 ................................. TTCAATAAGAAAGGACAAGACATATGAATAAGCAC 195647 33 100.0 35 ................................. AATGAATGCACAGAGAAAACAAAGTTTGCATTGAG 195715 33 100.0 36 ................................. TCTTTATACTCTAATACAACTAGCTATATATTATAT 195784 33 100.0 35 ................................. AGTTTAGCGGCAACTGCTTCAGCAGCGCCAAAGAC 195852 33 100.0 35 ................................. AATCCGGAAAAGGCCGCACGTCTTGCCGGTGGCCA 195920 33 100.0 34 ................................. TGGGAAGGTCATCGTGCGGCTTTGGTACTTCTTC 195987 33 100.0 35 ................................. AATAGGTCATCGTATAAGCGGCCGCCAAGCTCACG 196055 33 100.0 35 ................................. TCCAGGTCCTTAACGTTGTAATAGCCCATCAATCC 196123 33 100.0 36 ................................. CATTCGCTACGCGGTATCCAGCTCGTGTTGTCTCCC 196192 33 100.0 35 ................................. TCGATCATCTCGATCATGCCTGTTACCACAAATGC 196260 33 100.0 35 ................................. ACTTGGCCTGAACCAGCTCGAACAGGTGGCAAAGA 196328 33 100.0 33 ................................. TGCAGGGCGGCCTAACTGATCATGAGGCCGACG 196394 33 100.0 35 ................................. CCGACAACGGGTGAACCGGATGAAGGAGTGGACAG 196462 33 100.0 36 ................................. ATCGGATTGCCGTACAGCTTGGGTTTCTCGAAGGGA 196531 33 100.0 35 ................................. TCGCAATTTACGGACCATGGATCTTGCTTGTACTC 196599 33 100.0 35 ................................. TTTTAGGTAGGGTTGATCTGAGATTGCGTTTTCCT 196667 33 100.0 34 ................................. ATTGCGGGCGATATCGCAGGGACTCCGATTAGTG 196734 33 100.0 36 ................................. CTAGCAAGATAAAGTTTATCTTTGAGGATATATCTA 196803 33 100.0 34 ................................. CATAAGGTGCAGCACGTTGTATCTGCCTGTGTTG 196870 33 100.0 35 ................................. TTGAGTGGGTTTAAACGCTTTTCTGAAGTTACCGA 196938 33 100.0 35 ................................. TGTGTACCATTGCAATAGTGAGAAACCATGCGTGG 197006 33 100.0 35 ................................. TATTTGTATCGCTGAAGATGCCTATAGTTCGTTAG 197074 33 100.0 35 ................................. ATACCAACTGTTATTGTTGAAGTTCGCTTGCAGTA 197142 33 100.0 34 ................................. AGTCCTGACGGGGTTTATTTGGCTGTGGCACATA 197209 33 100.0 35 ................................. CATATCTCGATGCTCAAGGACAGCCAGTTCAGCAG 197277 33 100.0 34 ................................. TATCCAGATGATAGACACATTATGGATGGACTTT 197344 33 100.0 33 ................................. CGTGTACAAATGGTTTTATATGCCCTCGATTAC 197410 33 100.0 33 ................................. CTTGGAAGTACAATGATGAAGAACAACCATTGA 197476 33 100.0 36 ................................. GCTAGCAGTCTGGAAGCATTTACTTCAGCTGATTTA 197545 33 100.0 35 ................................. GTCACAAAGTACGACCTGAACAGGACGCGATGCTA 197613 33 100.0 34 ................................. ATCTTAATTCCAAAGGGAGACGGGACCTTTATCC 197680 33 100.0 36 ................................. TAATGAGATACCAAGACACCCTATTCTACGACGACG 197749 33 100.0 33 ................................. ACAACCCTGGGCATTATCCTTATGGCTGCTATC 197815 33 100.0 37 ................................. TTTGTTTGAAGATTGAGATGTTGGGTTAAAGTGTCAA 197885 33 100.0 35 ................................. ATCTAAAACTGGCTTTCCCCGTCTCTCCTGCTACT 197953 33 100.0 36 ................................. AACCAAGTGCAGTACGGTGATCCAGTCGAACACAAG 198022 33 100.0 33 ................................. TCAGACATTGACCATCAACTGGAACAGTATTGT 198088 33 100.0 35 ................................. ACGGTATCGACTGACTACATATTAGGAAGAACTGA 198156 33 100.0 35 ................................. AACGGCCCACTAACGTTTTTGCAGTTGGCGATCAA 198224 33 100.0 34 ................................. ATCCAAATGGGCAATTCCGGACTAAAGGTTCAGG 198291 33 97.0 0 ....................T............ | ========== ====== ====== ====== ================================= ===================================== ================== 45 33 99.9 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GCAACCCGACATTCTGCTGTTCGACGAGCCGACCTCGGCACTCGATCCCGAGCTGACCGGAGAAGTGCTGCGCGTCATCAAGCAGCTGGCACAGGAGAATATGACGATGATGATCGTCACCCATGAGATGAGCTTTGCCCGCGATGTTGCGGATCGCGTCTTCTTCATGGATAACGGCGAAATCGCCGAGGCGGGTCCGCCGGAGCAGATCTTCGGTAATGCCAAGCTGGAGCGCACGCGTACGTTTTTGCAGCGGGTGGAAGTGGAAGGGTAGAGGGCTGAACAGGAGCATGAGCAGGTGCGAATGCCAAGCTCCCATGAAAACCCCGGGAGATTCGCACCTCGTAATTTGTCGAAAACGTCATTTTGTGACCTTTTGGCAACAGATTACTTGAATATAATGGGTTTCATATATTAAACTAAATATAATAATTGACTAAATGATCGAAAACACGTAATGAGTATATATACATATGCTGTTGTTACGTGTTTTTTTCGCT # Right flank : TTGATGAGGGGAGGCCTGAAATTAAAGGCAAGGTTTCTCTTAGGTGATTTTAGATCTTTTCGCTATGTTTGATCTTCTCGTCCTGAACTAGAGTGCTATAGTTCTCTTCACATGCATACTTCACGTATTTAGTCGATAAAGTAAATATATTAAATAAAATCGGAATATTTACAAATAATGGAGCATATTTTCCTGGTTAATCAAGTATAATAAGACTACTTAATAAACAGGGAGGATTTACCTTTGGATCAACGTCACAATGATGTGGATCGTTATTATAGCGATCCGCTTCCGCCACCACCTTATGTAGTACCAAAAACCAATAGCAAGTCTATCGCAGCTCTTGTCTTGGGGATTTTGTCGCTCACCATACCATACTTGGGATTTTTTATTGGTATCGTAGCTATCATATTTGCGTCGCTGGCACTGAAAGAACTCAGAATTCGTATGGAACAGGGGAAAGGTTTGGCCATTGCGGGTCTCGTCTGTGGGATTATTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 202255-203235 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTZ01000001.1 Paenibacillus pabuli strain DB-3 Ga0227271_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 202255 33 100.0 34 ................................. CGTTCGACTTGATCACAAACACCAATACACAAAT 202322 33 100.0 36 ................................. ATAATCCGGCATTGTACCCACAACTAATGTAGTACC 202391 33 100.0 36 ................................. ATTACCCTTGGTATTCGGCCCGATAAACGCGATCAC 202460 33 100.0 34 ................................. ATCGATAACCGTCCATGGAGATGAAGGAATTCGA 202527 33 100.0 36 ................................. CAGTCATGGTTACGCAAGTGGACTCTAAAGGTGGAC 202596 33 100.0 34 ................................. TTCCGTCGCTGCTTTGGCACTGAGGAAACCGGTT 202663 33 100.0 34 ................................. ACGCAAGGCATCCGTGACATGGCTAAAGAAATCC 202730 33 100.0 34 ................................. AATGAGTTCTTCAAGCATCCAAGACGCACGCTTG 202797 33 100.0 35 ................................. ATATGCATCACGTTAACTGCCAGTGTCGCCTATGC 202865 33 100.0 35 ................................. CATGTAGAAATAAACTCGGTGATTTGTATTTTCAA 202933 33 100.0 34 ................................. AATGAGTTCTTCAAGCATCCAAGACGCACGCTTG 203000 33 100.0 35 ................................. ATATGCATCACGTTAACTGCCAGTGTCGCCTATGC 203068 33 100.0 35 ................................. CATGTAGAAATAAACTCGGTGATTTGTATTTTCAA 203136 33 100.0 35 ................................. CAGTAGATAAGCGATATATTCAGGAGTCTTGGCGA 203204 32 90.9 0 .........T.............-A........ | ========== ====== ====== ====== ================================= ==================================== ================== 15 33 99.4 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : TCGTACCTTTGCCCACATTGGCCAGTCTCGCAACTTGCTCCATTGTGGTGGCTTTGTATCCAAACAACGCGAACGATTTCTCAGCAGAATCAATGACCTGCTGCCTTCGATCGATGGTTTTCATGGCAGCTAACACCTCCTAATCATATGCAATGATAAAAGACAACTCAGAGTTGACCGGATTACTTATTTGGTCAATTGGTCGTTTATAACTGTAGCACTCAGGCAGGAATGGTGGATGTGATCTTTGTCATGGTTGGATGGGAGATAAAAAAGATTATTCCGGGGAATCCGTACGTGACTCAGGCAGGTGCGAATGTGATGCTTACATGAAAACCCTGGGGGATCGCACCTCAGATTATGTCGAAAAGAGGTATATTATTGCCTTTTGGCAAAATACAGACAGGAATGGATTGAATTATAATAAGGAAAGTCATAGAATAATAGTGAAAAAACGTGCTTTTGATGGATCAGATCGTTAAGATACGTGTTTTTTCGCT # Right flank : TTGGTTGCGATCAAAGCGGGCACCCATCCATTGGAGCTACAATCCGAATGGAGTGCGAAGATCAGGAGGAAGATAAATAAAAAAAGGGAATTAAAATGCTGGAACGTGTTACCGTTCTTATATGCAGCGTTGTAGGTTTAGAATTCCAATTATATTCCTTAAAAAAATTAGTGGGTTCAAAAATTCTGGTACACAGTATAGATGGGCCATCTATAGAGTGCGAAGTGAATAGATGCGAGCTTGTCTTTTTCGATTACTGAACGTTCGATTGGGGATGATATTAGAGGAGATTGAACCTTAATAGAATTAAGAGAGGCTCTTTTATTCAAAAGTTGATGATATATGTGCTAAATCAGGATAATATGATTACCTATTTTTTAAAAAAAATTATCGGAACTCGTGTTGCTTGAACATCAAATTTTCTTATTGGAAAGGAGTATCGGTTGTTAGTTGGAATATCGTAGATTAATGTGAAATACAGACAATTTTACCTATATAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 3 205089-205717 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTZ01000001.1 Paenibacillus pabuli strain DB-3 Ga0227271_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 205089 32 100.0 34 ................................ AAATATCTCTGTAGAATCAGAAGCTACTAAAAAA 205155 32 100.0 34 ................................ TTTATACATACTGTTTGCGTCCTGAGCTGATAAA 205221 32 100.0 35 ................................ GATCTCCGTGATTTCGGCTGCGGTGAGTTTAACGA 205288 32 100.0 34 ................................ AGGAAGCGAGAGAGAATTACAAGATTTGGCTAGA 205354 32 100.0 34 ................................ CTGATGATTTATGCACCCTGGATCATTTTGATCC 205420 32 100.0 34 ................................ GTTGTGTACGCGTCAAACGGCAAGCTCGGGCTAC 205486 32 100.0 34 ................................ CGCCTCAATCGTCGCCAGCGCGGAGCCGACTTCG 205552 32 100.0 35 ................................ AAAATCAACATCGGATTGCTGAAGATGGCTCTGTA 205619 32 100.0 35 ................................ TGATCGTTTTAATGCTGCATCGATAATAATCTCAA 205686 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.7 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TCGCTGAGCACCCCCAAGGAAATGTCAAAGAACTGATAGAGTCAATCATGGATAGATTGTGTGGCATGGATGCTTTGACATTTCTCACGGATGTCTTATTGTGGACTCCAGAACGTGTTGATATGAATTTGAAACTTGATCGTTTTCGATAAAAATATGATGCGATGGTCATAGCAGCATATAGAATTAAGATCAAATACATTGGATATTGATATTTTTTGGTTCTTTAGATGTTGATACTATCAAAATAATATTTTTAAGTAACAAAGATTAGACCGCTGAAAAGCGCTGCTTTACTGGTGCGAATGTTAAGCTCACATAAAATCTCTAGGAGATTCGCACCTCGAAAATTGTCGATTAAGCTATTATTGTCCCCTTTTGGCAACATAATTCTTGAATTACCTGGATTATTTGTATTAAGATGAATTTATCATCTTTACTAAACGATAGAATAACGTTTAAAACATCTTTTTTTAAACGACTATACGTTATTTTCTGCT # Right flank : TATCATTACGAGGTAGGCTGATAGGTGCCCACTGAAGTCGCAATATCAAAAGCACTAAAATGCCAATCACAAGTCAAAAGACTTACCATCATCTACACTAATCTGTAGCATGAGGTGAGTTTTTTTATATTTGATTGAATAGAGTTTTGACTTAGCTGCATATGTATTACTGTCCTCTTACCAAATTACATAATATTCTAAAAGTATAGAATTTATAGAAGGTGAATGTATTTTAGTGTCGAAATTTACAATGTGAGTCTTTTTGCCTATGGATCTGGGATTAATGTCATGAAATTCAGTGGAGGTGAAGTGGTGTGACCTATATTGCGCATATCCGTCAAAAGGATGGAACAGTACAAACCGTTCAGGATCACTTAGTAGAGGTTAAGCAAGGGGCGGAGAAAGCTGGAGAGAAGATTGGTGTCAAATATTTGGCAGGCATTGCTGGTCTTCTGCATGATATGGGCAAAAATACAGATCTTTTTCGAAACTACATTCTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 214245-216636 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGTZ01000001.1 Paenibacillus pabuli strain DB-3 Ga0227271_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 214245 33 100.0 36 ................................. TTAAGCTCCAACCTAACCCGTTAATGTCGTCCATTA 214314 33 100.0 35 ................................. CTGCTTCCGTACACGGCCCTGAGACACTACTGGAC 214382 33 100.0 32 ................................. CTCCTATCCGGCGTCCATGACGTCGCTGCCTA 214447 33 100.0 35 ................................. GGATCGATAAGCAATAGCTTTAACTGTTGAGGAGA 214515 33 100.0 35 ................................. GGATCGGAAATGTACAAACTGCTTCTGACCTGGGG 214583 33 100.0 35 ................................. AGCTCAACAATAAAGAGAGAGGTTCAAAACCTCGT 214651 33 100.0 34 ................................. TTAATCTCGCAGCCAAGCCGCATATTAATGCACC 214718 33 100.0 35 ................................. TGATGAATTTGATTGGGCAACCGATTTGAAAATGG 214786 33 100.0 35 ................................. ATGGTGCTCTTGGGAATTCTGAAACAACGGTTGAT 214854 33 100.0 33 ................................. ATCAAAAATGACCGTTAGGGCAGTGCAACATAT 214920 33 100.0 33 ................................. TTTTAGATTTACGGTTTAATCTATGCGGGAAGC 214986 33 100.0 33 ................................. AGTTTAGCGGCAACTGCTTCAGCAGCGCCAAAG 215052 33 100.0 34 ................................. ACAAAGACGAGCTAGGGTGGAGTCGATTAGTTAG 215119 33 100.0 35 ................................. CGTAGAAATTATCATAGGACAGGTGATCATATGTA 215187 33 100.0 35 ................................. CGATTATATATTTCTCATACTCCATTTAAGATTGG 215255 33 100.0 36 ................................. TACTGCTGCATCCACAATGTCTCCTGGTATAACGCC 215324 33 100.0 34 ................................. CAACCGGATTGGCGTTTGAGGTTCCATCGGGATA 215391 33 100.0 34 ................................. CTCAGATCACCCGTATCTCCGACAGGGGCCAATC 215458 33 100.0 35 ................................. TGTTTACTCATGCCGCGTCAGCCTCCGTATCAATT 215526 33 100.0 36 ................................. TTATTGAACAAAACAACGTAGAGCAAAAGGAACTTT 215595 33 100.0 34 ................................. TTGGCAGGCTGCGTGGTGTATTTCAAGATTTGTT 215662 33 100.0 34 ................................. TTGTGCAGTTATGGTATTTATCCTTGGCGATCCG 215729 33 100.0 34 ................................. CAAACGTATTCTCTACGCCGTCAACGGTATAGAA 215796 33 100.0 32 ................................. AGGATCGAGAGAGTGGTTCGGAGGCTTCCAAA 215861 33 100.0 34 ................................. AAAATACGGTATGTATTACGCCCAAGCCTAAAGT 215928 33 100.0 35 ................................. AGACCCTGCTATGGTGGTTCCGAGCGGATCCCTTG 215996 33 100.0 33 ................................. ATATTCGAACCGAAGATCGACGGCCACCGCCTA 216062 33 100.0 33 ................................. AGCTATGGAAGACAACGTGCAGAAGTAAAGTCT 216128 33 100.0 35 ................................. AGCCCAGTTAACATGTGCTGCGTACTTGATATTGT 216196 33 100.0 34 ................................. CACGTGGAACAAAAAGGAGATCAATAAATGAGTA 216263 33 100.0 35 ................................. ATACTCAAACTGCACTACATCACCGTCGAACACCT 216331 33 100.0 35 ................................. CGTGATCGACTCATGAAGGAGCTAGAGGAGAAAGA 216399 33 100.0 35 ................................. AGTAATAAAGGGAATGGATACCAAAAAGGCGAGGT 216467 33 100.0 35 ................................. TCCGGCAACTGGGGAATTATAGCTCCAATCATATA 216535 33 97.0 35 ........................A........ TTTGGTGCCAAGAGTAAACGAAACCGAATGATGTT 216603 33 75.8 0 ........G...........T..TA..GAGT.. | A [216625] ========== ====== ====== ====== ================================= ==================================== ================== 36 33 99.2 34 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGACGTGAGCACTATAGATAGTGAAGGCCGAAGAAGGCTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAGTTTAGACGTTTAAGATTTGAACTGGAAGAATTGATCGATAAGGAGACCGATAGTCTTCGATTTTATAACTTAGGTGATAATTACAAAAGTAAAGTCCAACATGTAGGAGCGAAAGATTCCTATGATATGGGCGATCCTTTAATACTTTAACAGGTGCGAATGCCAAGCTCACATGATTTTACTGGGGGATTCGCACCTCGAAATTTGTCGAAAAAGTCTTTTTTGTGACCTTTTGGCAATGGATTTTAAGCAAATTCGATCGAGTAAAGGTTCTAACTAAGTTGAAATAACGAAAAGACGTTAATATCTATTCGAGAAATATTGCTATTACGTACTTTTTCGCT # Right flank : TTATCTATAAAAGTATACTGATGCATGAGGCCACCGTTCGTATGGGGGCCTTTTGGGCTTGATTGTCATGACCTAAAGAAAACACAAGTGAACGAAAAGACAGTCCATTGTTGCTCTCTCACAGGAACGCTAAAATGAAGTTGTTGAAGCGTTTACATTACATGGTGAAGGGAGCTTAACTCGGATGCCAGAAATTACGATCAGACTGTATGAAGGCAGGACGGATGAGCAAAAGCAGGAGATTGTGGAGGTGTTCACACGCGAGCTATCTCGTATTATCGACCGTGAGCCGGATTATATTTCCGTTGAATTCAATGAAATCCCATGGGACGAGAACGTTCCTGATAATTTGAAAGCCATGCAATCACAGAAGCAAGGAGGGGAGAAGACGTGAAGCCGGCGGACATTGCGCCGCCAAGCCGAGGAACAGCCAGACTTAATTCGTCTGGTCTGGGCAATCGGCTCGGAGATGCGGGACGTTATCTGTGGCGATACCGGAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //