Array 1 2877875-2873940 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP022077.1 Acinetobacter baumannii strain WP4-W18-ESBL-11 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2877874 30 93.3 30 ............................TC ATGGCCTCTGTAAAACTTTCCGACCTAAAG 2877814 30 96.7 30 .............................T CCACGCTTTTGACATCACAAAAAGCGCATT 2877754 30 100.0 30 .............................. GATAAAGACTCAGCAAAGGTTTTCACATTC 2877694 30 93.3 30 ............................TT GTTGCTGAATTGCTTGATTTACTGCATTGA 2877634 30 93.3 30 ............................GC TTGTGTGGTGCGCTGTGCTGCAATTGTAGC 2877574 30 96.7 30 ............................T. GTAAAGACACAATAGATAATACTTATAGAA 2877514 30 96.7 30 .............................C ATCGATGGCAGTTTCACTTTCTACTGCAGG 2877454 30 93.3 30 ............................TC CAGAAGTGTCACCGCCACCCTTAACACCAG 2877394 30 93.3 30 ............................GT CGGTCGAATGTCTGGGACTTTTTTGTTATA 2877334 30 100.0 30 .............................. AGGCATACACCCAGTAGAAGATAGACAAAA 2877274 30 96.7 30 .............................T ATATGTGCGTAACCGAGCAAGCTTGTCACG 2877214 30 96.7 30 .............................T ACCGAAAGATGACAAAAAGCACCCTAAGGT 2877154 30 100.0 30 .............................. GTGAAAAAAGCTGACAGCAAAATAAACTCA 2877094 30 96.7 30 .............................C TTCATAGAAACCGGCTTTCGGAAAGTTATC 2877034 30 93.3 30 ............................GT CCAAGTCTTAAAGATGTTCAATGGGCAATG 2876974 30 100.0 30 .............................. TCGAATCAAAATATTAAAGAGTTACGTCAT 2876914 30 100.0 30 .............................. TTCGTGTTGACCAGGAATTAAAAGACACTT 2876854 30 93.3 30 ............................CT CAAAGTATTTAACACGGTTGTTAGCAGGAT 2876794 30 93.3 30 ............................TG CAACAGTAGTAGTTCGTGTAGATCAGAAAG 2876734 30 93.3 30 ............................TG TTCTAATGTTTCTAACAAACCATACTGAAG 2876674 30 96.7 30 ............................C. AAAAAGAGCTTGCATATACAGATTCTAGTA 2876614 30 93.3 31 ............................TT GGTGTTGAACAATGCTTAAGTGAAATCACAA 2876553 30 96.7 30 ............................T. TATCAATCTTGTTAAGAGAAGCCGCATCAT 2876493 30 93.3 30 ............................GT GATGTGTATGTTCTATTAGTGGTGTAAATC 2876433 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 2876373 30 96.7 30 ............................T. GTCCCGAAATTTCAGTAGGTGGCTCATAGC 2876313 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 2876253 30 96.7 30 ............................G. CTTGCGATTAACGCCCCCAAAAGCCGGCAA 2876193 30 100.0 30 .............................. TCCCGCTTAGAACTTGTAAACAAAATTCTG 2876133 30 96.7 30 ............................T. ATACACCAATCCCGCTTAGAACTTGTAAAT 2876073 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 2876013 30 96.7 30 .............................T CATCATTGCAGTCTTATAAGAGCCAGGCTG 2875953 30 100.0 30 .............................. ACTGCATAGATGACCATTAGAGACATCCCC 2875893 30 93.3 30 ............................GT AGTGGGGACATTGTGTACGCTCATGATGTT 2875833 30 93.3 30 ............................TC ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 2875773 30 96.7 30 ............................T. CTAACTGTAAAACAGAAGACTTGCCAACTT 2875713 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 2875653 30 93.3 30 ............................TC ATAGTTAATATAAATTTATTATGACAAAAA 2875593 30 93.3 30 ............................TT AGCCGTTTGGACTTTACCAATCTATATTTA 2875533 30 96.7 30 .............................G CAATATCAATTACAGGAATACCACCAGCAT 2875473 30 100.0 30 .............................. TAGAATTAAAACCACGTTGATAATATAGGT 2875413 30 96.7 30 ............................G. ATTGCACTTGCTAAGCCAATAATGCCAACT 2875353 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 2875293 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 2875233 30 96.7 30 .............................G TGAATGGGATTTATTCGCAAGGTGATATTA 2875173 30 100.0 30 .............................. AAGTTTTTTTGACAATCAAGCCGGCAAGTT 2875113 30 93.3 31 ............................TG CATCGAAGTCATAGAACGCTTTGAGTTTCCA 2875052 30 96.7 31 .............................G CGACTTTGAATTGATGCCATCTCCGCCTTTA 2874991 30 96.7 30 ............................T. TTCAGATTGGCTGCGGCCTCACCTGTAGCA 2874931 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 2874871 30 93.3 30 ............................TC CATTCTCGCTAAGTGGCATCACACGCGATG 2874811 30 93.3 30 ............................TT GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 2874751 30 96.7 30 ............................C. ATGGATTTAAAGATTTCAACCGCTTGGGAG 2874691 30 96.7 30 .............................T CATCGAAATTTAGTTCTAATTCTTTAATTT 2874631 30 93.3 30 ............................TC ACTTCTCTTAATTAGTGCTGAAGAATCAAA 2874571 30 93.3 31 ............................CT GAATAAGTGAGATGTCTCTATGAGTTCAATT 2874510 30 96.7 30 .............................T TGAATTAATACGGCTTACTGCAATTGGTTG 2874450 30 96.7 30 .............................G TCTTTAATGTCGGCAACATGCTGTGCAAAA 2874390 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 2874329 30 93.3 30 ............................TT GCTGCCTGCAAACTTGTTTGGGGCTTTATG 2874269 30 96.7 30 .............................C TGGAATTCAGCAGTAAATAAGGGGTTAAGA 2874209 30 93.3 30 ............................TT TAAAGCTAAATGAGGGTTAAACCTAAGAAA 2874149 30 96.7 30 .......T...................... CGTGAACAATTGTTTTAGCTTTGAACATTA 2874089 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 2874029 30 86.7 30 A......A.........T...........T TTTGATCTTTACTTATTCTCGCTTCAAACA 2873969 30 66.7 0 .......A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 66 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.20, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //