Array 1 699034-697626 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYJR01000097.1 Vibrio parahaemolyticus strain 10-4244 contig97, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 699033 28 100.0 32 ............................ GAAAGCTGATTGCTACAGTTACTTATACTGAT 698973 28 100.0 32 ............................ GATTGAATACGGTGAATACGAACGCGTTGGTG 698913 28 100.0 32 ............................ AACAGGCTGGCCGCTTCACGGTTAACTTGCTT 698853 28 100.0 32 ............................ AAAGTACCTAGATGGGTAAAGCGCTGCTGATA 698793 28 100.0 32 ............................ ATTTCTATTTTTAACCGGGACTATTTCAAACG 698733 28 100.0 32 ............................ ATAGCCAGAGGCGAAGTAACCTTGCGCGTCAC 698673 28 100.0 32 ............................ TACACCCCGCCAAGCTTCAATAACGCAGCCAA 698613 28 100.0 32 ............................ GTTGGACGTGGACATGTTCAAGCTCAGTCGGA 698553 28 100.0 32 ............................ AATCGAGTGCGCAACAGGTGGCTTTTTATTAA 698493 28 100.0 32 ............................ TTATCAACAGACAAAACCAGCACCAAGCACGC 698433 28 100.0 32 ............................ CGACATCCTAGAGCGCGATTGTGGTTTACAGC 698373 28 100.0 32 ............................ AAACGGTTTACGTCCGAGTCAAAACCACCACA 698313 28 100.0 32 ............................ TTGGAGGGTAAAGGCTGCATCGAACTGCTAAG 698253 28 100.0 32 ............................ TTTCGCCAAAATTTTCCGTAACTTAACTGCAC 698193 28 100.0 32 ............................ CATAATAAACGATAGGGAACAAAGAAATAATG 698133 28 100.0 32 ............................ ATAAAACGCTCCCAGTTATCCCATAATAAACG 698073 28 100.0 32 ............................ ACCATATTGGCTTGAGTTAGATTGTTGTCTTT 698013 28 100.0 32 ............................ TTTGCTCAGTTTCAAGCTGATACTGATACACT 697953 28 100.0 32 ............................ ACAGTAAAAGCATTAGTTTGTAGTAGGCTGGC 697893 28 100.0 32 ............................ GAAGTAGAAAAACTAACTACATCAAACAAAAC 697833 28 100.0 32 ............................ ATCCTTCCATATCTCCTGTGCACGCTTACTCA 697773 28 100.0 32 ............................ CTGACAAGTGCAGGGCTAGAAAGTTTCTAGGT 697713 28 100.0 32 ............................ ACACTCCGAAACGTTTTGCGGAATGGCTCAAA 697653 28 96.4 0 ..........................G. | ========== ====== ====== ====== ============================ ================================ ================== 24 28 99.9 32 GTTAACTGCCACACAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAACTGGAAAAGACTAAGCCTACCTCGCTCTGTTTATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCGCCTGATAAGAGCAGTAGATTTCCGTTGTTTATTGAGATGAATGACATCGGAATTAAGCAAGAAGGGCATTTCGATTGTTATGGACTGAATGCCAAACTCAATCAACAAGACGGTCTTGGGACTGTCCCACAATTTTAACCAACAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGTTATAAAATACATAGAGTTACAATAGATAGAATTTGGCAAGGTAAAAACATGATTTTTATCCTAACTATCTGTTGTAACTTTCTTTTATTGATTTATTCTATG # Right flank : GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTGAAATTTATATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCCTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTATGAAAATCCATAATTATAATTGTTCATATTTAATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATCGCTTGGAAGTAATCGGTGAATAATACATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCAATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCACACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //