Array 1 147233-147730 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QXWN01000004.1 Rodentibacter pneumotropicus strain 1XD21-88 Scaffold3_2, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    147233	    36	  80.6	    30	AA.C.GT.A.T.........................	CGAAATATATGCGGGTTGGTGTAGAGCAGG	
    147299	    36	 100.0	    30	....................................	TTATCACCCGTTGTCAATTCGTCCATCGTA	
    147365	    36	 100.0	    30	....................................	GAGCTTTCCCTCCCTATGGTCGGGTCGGGC	
    147431	    36	 100.0	    30	....................................	AAAGCTCCGGAAGGTAAAGTGCTTGTTGTT	
    147497	    36	 100.0	    30	....................................	TACTCTAGTTAGCTTTCTAAAGTACACACA	
    147563	    36	 100.0	    30	....................................	TTATAAACAATTCCAGCTTACAGTGATGGC	
    147629	    36	 100.0	    30	....................................	TTCTTTTATGGGGAGGTTTTGTCGCTTTTT	
    147695	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  97.6	    30	GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT	                              	       

# Left flank :   GTATCATGATACTTCTGAAATTTTTACCGGTGATTTACCGACCCCCATAAAATATTTCAACCCTGAAATTACCCAAGCCTATAAACAGATTGAGAGTGCAGCAGAACTCCATTTGATCAGCCTTCTCCCTCAAGAATTACAAGAAGATTTCGCTTCTTACCTAGACAGCGAAACTTTTTCGGATGAAGAGAAGCATCTAGTCAAACAAGCCGACCTCATTTGTGCCTATATTAAAGCCCAGTTTGAACTGGATAATGGCAATCAAGAATTTAAAACCGCTAAAACCAGACTTGAAGCCCTTATGCAACAGTGGCACAGCAAAGAAATGGATTATTTCTTACAGGTATTTATGCCAAGTTTTGGACGCTCTTTGGATGAGATTGCGTTGTGATTTAGAGAAAAGTGCGGTTGAGAATGAGGCTGTTTTTGATACTTTATTTAATAAGTAGAAAAGATTTTGATGTGAAGAGTCAAATTTTCATCAACTTGAATACTTTTAA
# Right flank :  TATGGAGAGCAAAAAGCCTTGAACTGTAAGGGTCCAAGGCTTTTTTATCAAAAGAAAAAACAGTTTAAAACAATAGAAGTTGATTAGAATTGACCTTTTTTTCTTGTAATTTTTTCTCTCCAACTAAAATTTCCATATTAGCAAATTGCTTTTCTGTGATAGCAATGCAGCGAATTGAACCTTCTTCCGGTAAATTTGCGACTAATCTTTTATGATGCTTTTCCATTGAATCTCTTCCTCTTACAATTCTTGTGTAAATAGATAGTTGTAGCATTTGATATCCATCCTTAAGTAAAAATTGGCGGAATTGATTTGCTGCTCGCATTTTTGCCTTAGTAGTAACCGGTAAATCGAATAATACTATCATACGCATGAAAATATTCTCACTCATATTGATGCTCCGCAAGCGGTAGAATTTCCGGTAATTTTAGCAAATGGGCCTTTTTACTAATTAATGCAGCTTGCAAAGTGCCAACCATTCTATCAATTGCGGTTAACGT

# Questionable array : NO	 Score: 6.14
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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