Array 1 30573-29748 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSJB01000318.1 Erythrobacter donghaensis strain CCH3-A4 CCH3-A4_contig365, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 30572 36 100.0 30 .................................... GACAAGCCGCTGTCGCCAATCGTCAGGTCG 30506 36 100.0 30 .................................... TGCTGCTACCCCTTCCCGCGCGCGCGTCTC 30440 36 100.0 30 .................................... ATCGACGGTCGCCAGAAATTGCTCGGCAAT 30374 36 100.0 30 .................................... TTCTCGATGCGGTGCTGCGGGAACAGCCGC 30308 36 100.0 30 .................................... TGCCGGAATGGCCGCTGCCGCGAACCGAAG 30242 36 100.0 30 .................................... GAAGCGCTCGCTCAAGAGCGACATCGCCAC 30176 36 100.0 30 .................................... CCGCCTGAGAGCGATGAGCCGCATTTCTCG 30110 36 100.0 28 .................................... TCGCTGTCTTGCCAGCGCCGCTGTTTGA 30046 36 100.0 30 .................................... CCGCGCAACGCGGCGGATACGGCATATTCG 29980 36 100.0 30 .................................... AGCGCCGCCGTGCCCTGCTGAAGGCCCGCG 29914 36 100.0 29 .................................... ATGACCTGCTGCCCATGGCGAATCTGCGC 29849 36 100.0 30 .................................... GCTCGGCACGGACGGCATACGACCGGAGAC 29783 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Left flank : CCCCACAGCCTCAAACGATGGCGCAATCTGATCGAGGCTGAGGAAGTCGAGAGCGACTGGCGGGCGCTTTTGCACCCGTCGGCGCGGCCGCCGATAAGCACAAATATAAGCACTAGGACTGATGAAGCCGAGCGTATCCAGAGCTTGAAGGCCGAGATCGATGCCTCCGCCGGACCGCCAAAGCGAGCGACGCGGCGGCGCTTGTCGTTGAAGGAGAAGATCGCGCTGCTCTTGGAGGCCGAGCGTCATGGCGAGACCATCTCCTCGGTTGGCCGGCGGCACGGTATCTTGACCAGCGTGCTGTTCCGCTGGCGCGACCAGCGCGATGTGGCGCGACGGCACTTTTTTCAGCGAGTGGCGGATGACGTTCTCGATATCGAGGAACTTGCGCTTGAGGTTGCGCCGCTGCACCAGCAGCAAGGGCGCCATCTTGGCAGAAATCCGGCGCGCGCCGCGCCGATCGACATAGCGGGCCATCCTTGGCCCGCTATGTCGATTTC # Right flank : AGGTCTACGGTAACGGATTGGAAATGCTGTGATTTTCGCGGAGATTTTCCGCCGAAATCACAGCAGAACCATCTGGGATGGCCCGACTTGTTCAGTTTTTGGCGCGGTCCCTAGCATCAATTCCATTCTGCCATACTGCTTGTCCGTAACCTGGAGCGTCCTCACGCTGCCCTCCTTGGGCAGGCTGCTTCGCACCCGGCGGATATGCTTATCCACAGCATCTTGCCCCCGGCAGACCCTCGCGTAAACCGAAAGTTGCAGCATCATGTAGCCGTCCTTCTTGAGGAACTGGCGAAATTGGCTCGCTCGCCGTCTCTGCGGTTTTGTTTTCACCGGCAGGTCGAAGAATACCATCAACCACATGAAGCGTACCTCGTCGGCCTCCATGCTTAGTTGCGCCGAGCCAGCGGAAGCGCCGGTGTGTTCAGCGGTGTGGCGTTGCCGGCTTCGATCGATCTGACCAGACTGGCCGCGACCGCCTCTGTTGCTGCAAGGATCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTGGTTTCCCTACCGATTTGCCCATGGTAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCCGTGGCTTCCCTACCGATTTCCCCGTGGTAGGCT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //