Array 1 27-1033 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBMK01000031.1 Corynebacterium matruchotii strain ATCC 14265 C_matruchotii_ATCC_14265_Contig_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 27 29 100.0 32 ............................. CCTTGTTGGTGGGGTTTGCGCAGGCTCAGATC 88 29 100.0 32 ............................. CACCGCATCGAACTCATCGCCGCCCCGGTGCC 149 29 100.0 32 ............................. ACCACCCATGACGGCGGCCCGATTGAGGGCTT 210 29 100.0 32 ............................. ACCCTCAAAGGTTGGTTTAACACCACGGTGGA 271 29 100.0 32 ............................. AGGGCACCGTGGTCGAACGCGAATTTGTTGAG 332 29 100.0 32 ............................. CAGGGTGCGGGGGTCAGCAGTCACCTCTGCGG 393 29 100.0 33 ............................. CGGATAATGAACGCGAAGCCGACGAATGGGCCG 455 29 100.0 32 ............................. AAAAACGTCACAAAAATCTGCGGTTGTGCACA 516 29 96.6 32 .......................G..... ATGCGAGGCCCGGGGTTTATGCCCCGGGTTTT 577 29 96.6 32 .......................G..... CTATGCTTGTATGATGAGTTCATTTGGATTGT 638 29 100.0 32 ............................. GTATCGTTGTTTGAAAGCGGCATAGTATTGGG 699 29 100.0 32 ............................. GTGAAAGAGTTCCGCAAATCCCTCTACGGTGA 760 29 100.0 32 ............................. CTTGATGAGAAACTCCGCGCCAGTTTCGAGGA 821 29 100.0 32 ............................. GATGAGCTCTTTGCTCGCGCATATGCCCAATG 882 29 100.0 32 ............................. ACCTGGACGGCATATGTCAGCCGGGGCCAAGC 943 29 89.7 32 ............TGT.............. AAATCCGTGAATATCAACGACCTAATGCGCTA 1004 29 72.4 0 .........A.AT.TA..A..A.....T. | C [1030] ========== ====== ====== ====== ============================= ================================= ================== 17 29 97.4 32 GTATTCTCCGCGCACGCGGAGGTAGTTCC # Left flank : TGTTTTGGCCTGGTGCAAAAGCCCACG # Right flank : CATAGTGATCTCAGGGATCTAAAAAATACCTTAACGAGGCCCTATCACCCTACCACGAGAACCCCCGAGAAAGGAGAAAACACCATGAAAGTGCGACCTATGTATATAGCAGCGATTGTCACATACAGCGCCGCAGTTGCTACCACCCTTTGCAGCAAGAACATTCCTATCATCACACCTGTACTGCTCGCCATCGACACTGTAATCCTCGGATACCTCACCTGTACTGGCCGTTGGCGCTGCTAGTTACTCGCCCCATTAGCCTCGACCAACGGGATATATCTATTGCTCTTTCACAAAAGACCCCATAATGATCGGCATCACCCCCATCATGGTATCTCAGGTTATCATTCTCCCAACGTGAAGCTTATTCAGCCGCTGGGAAAAACTCATCTACACCAACATGCAAAAAACAGAAAGAATGTGTTATCTAGCTTGGTCTCCCTTAATTTACAGAGTCCAGTCATGTGTGTGGGAGGACGCCGAATAAGCTTCCCTAT # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGCACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA // Array 1 25273-26095 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBMK01000023.1 Corynebacterium matruchotii strain ATCC 14265 C_matruchotii_ATCC_14265_Contig_23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25273 29 96.6 32 ............T................ ACCATCGTGATCTACGCCCCAACTCTGCGTAG 25334 29 100.0 32 ............................. CACGGTGCCGATAAGCCCAATGCCGAATTTCG 25395 29 100.0 32 ............................. GTTGATCTCGATCTCGGTGCCGGAGGCTTCTT 25456 29 100.0 32 ............................. AGCGGGCAAGGGGGTTTGCCCAATAGCAGGGA 25517 29 100.0 32 ............................. CACGGTGCCGATAAGCCCAATGCCGAATTTCG 25578 29 100.0 32 ............................. GTTGATCTCGATCTCGGTGCCGGAGGCTTCTT 25639 29 100.0 32 ............................. AGCGGGCAAGGGGGTTTGCCCAATAGCAGGGA 25700 29 100.0 32 ............................. AAGTTCACGGGCGTACATGAAAAAGTCCATGA 25761 29 100.0 32 ............................. CACCCGTAGATGTGTTTCATCCTTCTCATCCA 25822 29 100.0 32 ............................. TGATCCACCGATACATGCCCGCCCCGGATAGC 25883 29 100.0 32 ............................. CGCCATTATCCATTTGGTAGCCGGCCTGCACC 25944 29 96.6 32 ............T................ TGGGATGGTGCTGAAGATTTCAGTGATGATTT 26005 29 89.7 32 .........A..TG............... TTAATAGCGAAATCGACCTTCTCCCTCTTTTT 26066 29 89.7 0 ............T.T.........A.... | T [26075] ========== ====== ====== ====== ============================= ================================ ================== 14 29 98.0 32 GTATTCTCCGCGCACGCGGAGGTAGTTCC # Left flank : GCCGTGGAGGGAGCGGCGACGCCGCATTGAAGCGAGTGGTGCTGCGCGGGGATGCTTGTACGGAAACGTTGATTCGCTCAACGTATAAAGGTCCGGCACACTGATAGCTTAATGAAGGTATAACTGTTGCGGCCTCAACCGAACGCAGCCCGAAACCTCACCTGGAGCCTAAAAACCGAAGAAGCGTGGGCAGGTTTTGAAGGCCCTGGGGCAGGGCTCAAGCCAGCCCGCTTGATGCTGATACCGATTTCGACGATGCTAGCCATCGGCGGATCAAACACCATCAAGCACCCTGCCCCGACTCAAGAAGTATTACGTATGAGAGGGAGTTAGCGGAAAAGCGTGGGAGGAGGGAGTGTGGGCAGGAATAAGGATCATAGGGCGTAGAGGATTGTCAGTAGCAGAATTTTTACCCCATAATTCGGCCATAAATCCCAGATTCCAGAGCGAATTTTGGCCCATTTTTGAGAATCATGCTATAAAAGGCCCAGCTCATTCAG # Right flank : CACAATATGATAATTACCCAGGTTTTCCAGAACCTGGCCAGGCCACACGTTGAGTAAGGGCCGGATCGGTCGGCCGTCGATAAGCTAACAACTTGGCACACACACCAACCAGCGTCGTCTAGAATCTTTGCTGGGGCGCGCCTGACGATGGCGGCCATTCGACAGAAGGAAAGCTCATGAAGGTTCTCATCACCGGCGGCGCAGGCTACATCGGCTCTACCATCGCAGCATGCTGCACAGACAATGGCATCACACCCGTCATCCTGGATGACTACAGCAAAGGACTCCGGGAATTCGCGCGGCCGTACGCGAACTACGAGGGCGACATCGCGGACACCACCCTCATCCGCCGCATCCTGTCCGAACACCCCGATATTGATGCTGTCATCCACTGCGCAGCAAAAATCGTGGTCCCGGAATCCGTATCCGCACCACTGGCCTACTACGAAAACAATGTCGCTAAGTCTATTACGCTGTTACGCGAGCTCTCGGCCCTCGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGCACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 30933-28844 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBMK01000023.1 Corynebacterium matruchotii strain ATCC 14265 C_matruchotii_ATCC_14265_Contig_23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 30932 29 100.0 32 ............................. GTGGGCTTTTGCACCAGGCCAAAACAGCAGTT 30871 29 100.0 32 ............................. GCTCAGCGGCTTTTGGCGATTCCATGAGCCAT 30810 29 100.0 32 ............................. GATGAGGAGCATGTACGCGACCTCATGAACAA 30749 29 100.0 32 ............................. TCACGGGTGACTTGAATCTCCGTTACCATATC 30688 29 100.0 32 ............................. CTCGGACTCCACACCTACCTCCAAATGGAAGA 30627 29 100.0 32 ............................. TCGGCGGGTGTGAGGGGTAGCGCTGGTAGGCT 30566 29 100.0 32 ............................. GTTTACGGGGCCGTGGTTGTAGCGGAGTGCTT 30505 29 100.0 32 ............................. ATCGAGCCATGCTAGGCGATGATCTAGCCGCT 30444 29 100.0 32 ............................. TTCAAAGGCGTTTCCGGCCAACTACCGGACGT 30383 29 100.0 32 ............................. CACCTCCGACCGCTCGAACAACTGTTCCAATA 30322 29 100.0 32 ............................. CGCCACGCTAGACCATCTAAACGCGAAAACCC 30261 29 100.0 32 ............................. TGATATTAATGGGGTGCCGCACTACGTGTGGC 30200 29 100.0 33 ............................. CGCAAAAACCGGGACAGAAGGATTCGGGGGCGT 30138 29 100.0 32 ............................. TGCATGATATCAACGATGGTGTTCTCAAACAT 30077 29 100.0 32 ............................. GTTGGGGTGCGTGTATACTATGAGTCATAGGG 30016 29 100.0 32 ............................. GCTATCCGTGGCGGGCATGTTTCGGTTGACCA 29955 29 100.0 32 ............................. CCCATAGGACGGGTTCGCCAGGATCCAGGTTT 29894 29 96.6 20 C............................ TAGGCGATGATCTAGCCGCT Deletion [29846] 29845 29 100.0 32 ............................. ATGTGTAAAAGCGTAGCAATTTCCTGATTGGT 29784 29 100.0 32 ............................. TATGGCCGGAGGTATGTTCCAGGGCCAGTACG 29723 29 100.0 32 ............................. ACCCAGAAAATCGGGATATGCGGCCACCCGCG 29662 29 100.0 32 ............................. CCCCGTGAAATTCTGCCGCAACCACTGGTAGG 29601 29 100.0 32 ............................. AGATAACAATGCTGCGGCGTGGTAGCCGCCCT 29540 29 100.0 32 ............................. GTAACACCCTCCCCAACGCCCCAAATCGCCTT 29479 29 100.0 32 ............................. ATTTGGTTTTGGAAAACCTGCACGTTATCGCG 29418 29 100.0 32 ............................. GGGTCAAACGCCCTGATGGGGACGTGTATAGT 29357 29 100.0 29 ............................. CGCCGGTAGCGCCTTTGAGGGAGAACAGG 29299 29 96.6 32 T............................ GGCACCCCTGGTGTAGGCGCCACCCCTGACAT 29238 29 100.0 32 ............................. TCATGCACCCGGATATCGCCCGAACCGATATC 29177 29 100.0 32 ............................. CCGGCGCAACGTTGCGCGATTTTCAGAAGCAC 29116 29 100.0 32 ............................. CGCAATGCTTTATCCTCCCAGCATTCCCATAA 29055 29 100.0 32 ............................. ACAAGAAACAGTTTGGCGACCATGTGGTGTAT 28994 29 100.0 32 ............................. GATTTGCTCAAACATGATGGCATTTCCTTTCT 28933 29 100.0 32 ............................. AATAAGTGTGCGTGCGATGCGGTAGCTGTAGT 28872 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 35 29 99.8 32 GGAACTACCTCCGCGTGCGCGGAGAATAC # Left flank : TTTGCACCAGGCCAAAACAGCAGT # Right flank : CCTAAATGAGCTGGGTCTTTTATAGCATGATTCTCAAAAATGGGCCAAATTTGGCTCTGGAATCTGAAATTTATAGCCGAATTGTGGGGTGAGAATTCTGCCACTGACAATCCTCCATGCCCCGTGATCCTTTATAATCCCGCCAATACATTGCACTGAAGCTTATTCCTCTCGTAGCCATTCAACGCTTAGCGGGAGCATGTTTTCCCAGCAGCTGAGCTTCATTCAAACCGATCCCCCGCGTTTTCGGTTGCCAATCGTTATCGCCAACCCTGTCACTAGGAGGGTGATGGTTGTGGCCCAAATGAGCATGTGTGTGGGTATAGTGGTGGAGAGTTTGGAGAAAACTAGATTCCCGAGCGGCATCACGGCTGCGGAGCTCGTGGTGACGACCGCAATGACGCGGCCTATTTTCTCCCTTGGGATTTCGCGTTGTAGCTGGCTGAAGAGAATGATGTTGTAAACCGTCACGAGTGCGGTAACGATCGTCAGCGAGATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCGTGCGCGGAGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 89560-89412 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBMK01000006.1 Corynebacterium matruchotii strain ATCC 14265 C_matruchotii_ATCC_14265_Contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 89559 29 100.0 32 ............................. GAAACAGCACCAGCGCCTGAACCATATTAAAG 89498 29 100.0 29 ............................. CAAATGTGGTGGTGGGGTTGCCGTGGTGT 89440 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 31 GTATTCTCCGCGCACGCGGAGGTAGTTCC # Left flank : CGCGGAGGTAGTTCCAGCAAAAAGCTCCTCCCCAACATTCCCCGTAGTAAGCCCAGTATTAGGGCGAAGATCATTATTTCGAGCTGCAACGAATTCACGTTCCATTTTGTGCCATTTTGCAGCTTTGGTAATACCAAGTTTATTGCGTAGGACTCCATTGGGGTAGAGATAGGCTTCCCACCGGTCGTTTTCTTGCTTCCAGTCATCGTACTCACTCATGTGTCAGGTGTGGTTTCTGGGGTTACCCCATAGCGCTGGAGGATCTCATCCCGGATTTCATCTGAGGTTTTTTCCCCTAGGATTATCCTAATGGCATCATCAATCATCTGGTCGGTAATCTCATATCCCTCAATACGGGAATTGGCCAAGACGTTATCCAGGTGTTTTCGCTGTTCTGGTGTTAGCGGCGCATTTTCACGGGTGTACATAATGATCTACCTCATTACTTATCAAGAGGAATAAAACTAACTTTACCTCTTCAAGTATGGCATATTCCTAGC # Right flank : GCATCGCCCAATGGCTCGTGAGAAAATCTAAGCACTACCGAGGCCGGCACCGCCGATGGTGACTCTCTCGGTTCAGGAAGCGCGAACCATCCTGAACCGGGGGTCACCCCCACCACCCTACCGCACGGATCAGAAGAAGGGAGGCCATCATGTCAAAGCGTCATGTCGTGTTTTGCTACATTGTGCTGCCCATCGCGGCAGTACTGCTCCCCCTCGTAGGGGGCCGGCTCTGGGAGAGTATCATGCTGCTTACAGTGGTAGCGCTCAACATCATTGTCGACACGCTATTGAAGGAGAAATAATGCGGCTAAAGTTAAAAGCTCGTTGATGAGACCGGCACTGAACACTGGACTGCTGGGGGAATGTGCCACCTATCGTATTCTCCGCCCATCCGGAGGTAGTTCCACCCCCAAACTACGAACTAAACAGTACAAACCCCAGACACTGTAAGCTGGGGTTTATACTCTATGGCAATATTCCAAAGGCGAATCAGCTTCGGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGCACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 2 90045-91477 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBMK01000006.1 Corynebacterium matruchotii strain ATCC 14265 C_matruchotii_ATCC_14265_Contig_6, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 90045 29 100.0 32 ............................. GGGTGCTAGATAGCGACCCCGGCACCGGGTAT 90106 29 100.0 32 ............................. CACGGACGACACGGAAACCATCAACATGCATG 90167 29 100.0 32 ............................. ACGGGCGCCAGGGCTTTACCCGCATCAAGCAC 90228 29 100.0 32 ............................. CAAATCCGAAAGAATGTCCGATGCCCCGCCTC 90289 29 100.0 32 ............................. TCGGGGATAAGGCAATGGGCTTGCACCCAGGC 90350 29 100.0 32 ............................. GGTCACCATCAGGGTCGAGGGCTTCCAGCATG 90411 29 100.0 32 ............................. CTGCTTCCAGTAAAGCAAATGATTCCACCGGC 90472 29 100.0 33 ............................. CGTGGTGCTGCAAGATGCCGACACGGGGGAATC 90534 29 100.0 32 ............................. GGATCACGATAGCGTGGGGCTGTTCCAGCAAC 90595 29 100.0 32 ............................. GGGTCAAACGCCCTGATGGGGACGTATATAGT 90656 29 100.0 32 ............................. GCTGCGGGCTGTGGTGTTTTTGTAGATTCCGC 90717 29 100.0 32 ............................. AAGGAGGCAAGCGTGTATGAGATGACCTACGT 90778 29 100.0 32 ............................. GATGCGCAAGCATTAAGCTCCCAAGCTGCCCT 90839 29 100.0 32 ............................. CCAAACCCCGCTGCTCAAACAACACCGTACAC 90900 29 100.0 32 ............................. TTTTTTGGTCACCGGGTCGTTGGGGTCAATAA 90961 29 100.0 32 ............................. TAGCCCCCAATAAGGTTGCATAGATGGTCATA 91022 29 100.0 32 ............................. GCGGCCACGATGCGGTGGTAGGTGTCCAGCAT 91083 29 100.0 32 ............................. AGCACTGCCATTAGGAATGGATCGTATTTACC 91144 29 100.0 32 ............................. CTTTTGGTTGACTAGTTTTGGGGGTGATGGTT 91205 29 100.0 32 ............................. CGTTTTTTTGGGGCGAGTATTTGAGGGGCAGC 91266 29 100.0 32 ............................. AGATTAGTGCTGGTGACGCTGCGGATTTGCAG 91327 29 100.0 32 ............................. AATCCCTCCAGGTCAATATCCCAGTCGGAAAT 91388 29 100.0 32 ............................. TCGGCGGGGGTAGCGACCTCCTGTATCCAGTG 91449 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 24 29 100.0 32 GGAACTACCTCCGCGTGCGCGGAGAATAC # Left flank : GTGCGCGGAGAATACGCTAGGAATATGCCATACTTGAAGAGGTAAAGTTAGTTTTATTCCTCTTGATAAGTAATGAGGTAGATCATTATGTACACCCGTGAAAATGCGCCGCTAACACCAGAACAGCGAAAACACCTGGATAACGTCTTGGCCAATTCCCGTATTGAGGGATATGAGATTACCGACCAGATGATTGATGATGCCATTAGGATAATCCTAGGGGAAAAAACCTCAGATGAAATCCGGGATGAGATCCTCCAGCGCTATGGGGTAACCCCAGAAACCACACCTGACACATGAGTGAGTACGATGACTGGAAGCAAGAAAACGACCGGTGGGAAGCCTATCTCTACCCCAATGGAGTCCTACGCAATAAACTTGGTATTACCAAAGCTGCAAAATGGCACAAAATGGAACGTGAATTCGTTGCAGCTCGAAATAATGATCTTCGCCCTAATACTGGGCTTACTACGGGGAATGTTGGGGAGGAGCTTTTTGCT # Right flank : CCCTAAATGAGCTGGGTCTTTTATAGCATGATTCTCAAAAACGGGCCAAATTTCGCTCTGGAATCTGGATTTTATGGCCGAATTATGGGGTGAAGATTCCACAACTTCCAATCCCTCATGATAAAGCCTATTCAACCGCTGGGAAAACTCATCTACACCAACAGGTGGAAAATCAGAAAGAACACGTCATCTAGCCTGTCTTTCTTACTTCCAAAAGATGGTCATGCATGTTAATGCCTCAAGAAGCTGAACCACATTTCCCTGCAACCGAATTAGCTTCGACAACCAATACATTAGCCATGGGCTTACCGCCCTAGCAGCCCAGGCCAACACCTCCCAGCCGATCGGCCCACCCTGCATGCGCGGAGAATGCTACTACCTGCACGAATCTGCCCCCACCCCGACGTCGTAAAGCATGCAAAGAACCCCAGCTCACACGTATTTTGAGCTGGGGTTTTGATGGAGCCGCCTGTGGGAATCGAACCCACGACCTTTTCATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCGTGCGCGGAGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //