Array 1 43941-43732 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNTE01000012.1 Photobacterium kishitanii strain 201212X NODE_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 43940 28 100.0 32 ............................ ATTTGAAATAGATAGCATTGACCATCTCTCAC 43880 28 100.0 32 ............................ AATGTCTACACATTACAAGGCTTACTTGCGGC 43820 28 100.0 32 ............................ GCATCCCAAGTCGCTTTCGATCTAAGTTTTGA 43760 28 82.1 0 .C..............A..A.A.....A | A [43737] ========== ====== ====== ====== ============================ ================================ ================== 4 28 95.5 32 GTGTACTGCCGAGTAGGTAGCTGATAAC # Left flank : GAAATGCAAGATCTTGGTTACTTCGATATATCAAAAACATTAATTGTTTCAATTGAATGTAACTTTGCATGTTTTAAGCGTTATCAAAAGATCGACAAATCGTCAGCGGCTGGTTTTCATCGAAAGATAAAGAGGCTTGCTAAAAGAGCGAATAATAGAGGTGAGGTTTTTGATAACAAGAAGTATAACATTTACAAACAATGCGATATTGGACACTATCATTCATTAGCAGAAGAAAGTAAAAGTAAAGGGTATGGATTTAGATTAAACATTCAAAGAACTAATGAAGTCAGCATCAATAATATACCTATTTTTAGTAGCTATGGATTAGCAAACACAGCACACGCATTACAATCTGTTCCCATAATTTAACCCTTTTATTTTGACTATTCCTAATCTATTGATTTTATGGGCTTTATAACCAAGAAAAAATTTAGGGTATCTTCTTGGTTTTTTATCTAACCATCTGATAATAACGAGCTATATTTAAATTAGTTACA # Right flank : GTTAATCAAGCGAATGGATATAGGTATCGAGATACAGCATACTTCTTTTTAAAGATAAAAGCGGCTTTCTCCGGAAAGCCGCGATGAACCTAAAAATATGTAAGTAACTTTCTTACAGCCAGTCTTAATTAATAGTGATGATACTACGAAAATATCAACTTATGGTTGTTTTGAGTAATATCAATATATGGATGTATTCTTATTAAGCATTTGATGTTGATGGAAATATTGAATATCAACTTATGGTTGTATCAACAGTAAAAGGTTCGCCATATAGCGAACCTTTTCTTATTTACAGCTTCAAAAAATCAGTGATTACTGCGTGACAGCAATCAATGCATCAGCAAGGTAATCTATCTGTTGTTCTTGCAAACCGGCGATATTAACTCGGCCATCGCCTACCGCATAAATTGCAAATTCATCACGCAAACGCATAATTTGTTCTGGCGACAACCCTGTCATTGAGAACATACCTTTATGATCCGCAATAAACGAAAATT # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTGCCGAGTAGGTAGCTGATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 444084-444472 **** Predicted by CRISPRDetect 2.4 *** >NZ_LNTE01000002.1 Photobacterium kishitanii strain 201212X NODE_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 444084 28 100.0 32 ............................ TTCCCGTAAAGCAGCATTATTTGAAAAATTAA 444144 28 100.0 32 ............................ AGCCGTACGAGCAATAATATTTATAATATCCT 444204 28 96.4 32 ..............C............. AGTATCGAAAAACGTTGCCCGAGTATGGGAAT 444264 28 96.4 33 ..A......................... TCCGTGACCCCTGTTACTGATATATCGAGTTTC 444325 28 100.0 32 ............................ AGCAACAGCAAACTGTTTAAATTCTTCCATTG 444385 28 96.4 32 ..............C............. TTAAAGTAAGCTTCTGGTTCTGGCTTTATCGT 444445 28 85.7 0 ............TC..........T..C | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.4 32 GTGTCCCGCCACATAGGCGGCTTAGAAG # Left flank : AGACTTTAAGGGTGAAAAAGGCTTAGAAGCCTTAGCTAATTGGCTGCAAGATCCCAAGAAAGCATTTAGTGATAAACCTTCGCAAAATAGTAATACCGAGTATTACAAAGGGGTTTTTGATGCCTCTAAATATGGTGTCAGTACACGATCACCAGTACTTACACAACGTTATGATGGTGTGTTTGAACTGTATATAAAAAGTGATGTAGAAACTGAACAGTTGATTATGGATAAAATCAAACACAGTGGACGCCATTACTTACGTGTTGGTAAGTTATGTTTAGCTGAATTAACGCAATTACCTGCCCGTATCCCTTCAAGTTATTGGGAAACGGTTGAAGATGATGCAGTCAAGAAAGGTTAAGTGAAATACCCTTTTTTATTTAAATTCTATAACGTATTGATTCTAAAGGGTTGCGCAATCGTCTTTAAAAAAGGGGTAAACGCATTTAATTTAATTAAGATTCTGTTTTATAATATTTTTTGCTAATTTCCCATCA # Right flank : CAAATCAATTAACATAAAACTAAATACTATAGATACCCCAACAACCTATTAACAGCCAGTTCCACTTCTTGCTCATCGCTAAAGTAACTATTCAAAATGCTATTCCACAGTACCCCGAACGATGCTTGATATAGCTCACTAAACTCAACATCATCCATTTTGGCAAAGCGAATACTCTTAGCCTCTCTGCGAATAGAACCATTAGGCAATACAACTTGGTCATACCATCCTGCTTCAACAATCACCCATTTGCGATACGCTTCAAATGACTTTTCTGTTTCAAGTTGCGCTCTATGTGCTGATAGATGGTCTAAATAGCCACTCGCCATATCTTGCAGTGTTTGTTGCTCCCCACCGTATTGCGCTAACATCCGAACAAAGCGCATCAATAGCCCTCGTTCTGCTGGTGATACTGTTCCTCCTGTTGGATTCCAGTAATCGAACCCTAAGTTCAATAGCGCAAAATACTTACGATGAAACATTGGATTGCGTAACGTTTT # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTCCCGCCACATAGGCGGCTTAGAAG # Alternate repeat : GTGTCCCGCCACATCGGCGGCTTAGAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //