Array 1 359819-358509 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAFZC010000002.1 Pseudooceanicola aestuarii strain E2-1 NODE_2_length_745440_cov_45.350950, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    359818	    29	 100.0	    32	.............................	GCAACAACCTGACCGGCTCAATCCCCAGTCTG	
    359757	    29	 100.0	    32	.............................	TACCGACAGAACATCGTGGTACGGCTGTACAC	
    359696	    29	 100.0	    32	.............................	CTGACGCGCCGCGAGATGGTGTTGATGGCCGA	
    359635	    29	 100.0	    32	.............................	ACGCCGCCGAAGCTGTCGCCACGGGCCCCCGG	
    359574	    29	 100.0	    32	.............................	TCGCTGCGCGAGGAAATCAAAAGGCGTGACAG	
    359513	    29	 100.0	    32	.............................	CCTGAGCGGCGTCGGTTTCGAGGAAATTGGTC	
    359452	    29	 100.0	    32	.............................	CTGTTCGGGCAGGGGGCGGCTCATGCGGATGC	
    359391	    29	 100.0	    32	.............................	AGGGCAGAGGCATGCCGCGATACAGAGCAAAG	
    359330	    29	 100.0	    32	.............................	CTACCAGTCACCAGAAGGCGGCTGTTCGCAGT	
    359269	    29	 100.0	    32	.............................	ATGATTTCGCGGGGCTTCCAGCCGCTGTCCTT	
    359208	    29	 100.0	    32	.............................	TGGACCCAGCCCAAGCGCCTCCCTAGGGGGCG	
    359147	    29	 100.0	    32	.............................	ACCGGGTAGAGAACCGAGCCGTATTTGACGAA	
    359086	    29	 100.0	    32	.............................	ACCGGGTAGAGAACCGAGCCGTATTTGACGAA	
    359025	    29	  96.6	    32	............................C	CCCCGTGGTCAGATTCTGATCCTGACGGACAG	
    358964	    29	 100.0	    32	.............................	TTGTTGAAATGGGTGTCTATCGTCCACCCCCA	
    358903	    29	 100.0	    32	.............................	ACATGCGCAGCTGGTGGTCGAACCAGCACTAC	
    358842	    29	 100.0	    32	.............................	CGTGGTGTCTTCGCATGTGATGCGGATGCGCT	
    358781	    29	 100.0	    32	.............................	GTTTCGCGGGGTGGCGATGTCTTCGCAGCTGA	
    358720	    29	 100.0	    32	.............................	TCCGGGCGGGGGTGATCGAAAGGGGGAGAGGC	
    358659	    29	 100.0	    32	.............................	GCGCATGCAGGCTGTCCGCTGGGGTGTGCGCG	
    358598	    29	 100.0	    32	.............................	GTCATCAGCAGAACCCCATCATCATGTTCACC	
    358537	    29	  93.1	     0	..............A.............A	|                               	
==========	======	======	======	=============================	================================	==================
        22	    29	  99.5	    32	CCGTTCCCCGCCCACGCGGGGATCAACCG	                                	       

# Left flank :   CCGAAGGAGCGGGCTCTTGTCGAAGATCATTCCGCGCATCGAGGAGGTCCTGTCAGCAGGCGAATTGCCCATGCCGGAACCGCCGAAGGAGGTGATAGGTCCGGCATTCGAAGACGAGGGGAAGTCTGGCGATGATGGTCATCGTGGTTAGTCGCGCGCCGCCACGTTTGCGTGGACGCCTGGCGGCCTGGCTGCTTGAGGTTCGCGCGGGGGTCTACGTGGGCGATTATTCCGCACGGACACGAGAGCGGATCTGGGATCAGGTGCTTGGCGGGCTGGAGGACGGCGATGCCGTGATGGTTTGGAAGGCACCGAATGATCAGGGTTTCAATTTCGCCACCGCAGGTCGAAACCGCCGTATGCCCGAGGATTTCGACGGTCTGAAACTGATCAAATTTCTACCTCGCCAGACTTGAGCGTGAGCACTTTATCGAGGTCGTGGACTCGGTACGTTTTTTGACATTCGAATAATCACGTGTTTTCAATGATCTCCGGAAAGA
# Right flank :  ATCCGATTGCCCCGGACCCGGATGACGGGGGGAGCGTCCCGCCGGACGGCAGCCCCGCAGGTCCCGTGGTGCCCGCTATCGGTCAGCTCAGCACGGCGCCCCTGGCGCAAGCGCGATCACCGGGCCGTTGGCGGCGGCCGCATCCTCGGGGTCGTGGGTGACCATCAGGGTCGGAACCGCGCGGGATATCACATGTTCAAAGGCGAATGTCCGCATCTCGTCGCGCAAACCGGGGTCGAGCTTGGAAAAGGGTTCGTCCAGCAGCAGCGCCGCGGGGTCGGCCAGCAGGCTGCGCATCAGCGCGGCGCGGGCGCGCTGACCGCCGGACAGGGTCGCGGGGTCGCGGTCGTGCAGCCCGGTCAGCCCGGCCTGTGACAGCGCCTCTGTCACCGCTGTGCGCCGGGCATCGCGCCCGCGCAGGCTGGCGGGCAGGCCAAAGGCCAGGTTGTCGCCCACGCTAAGATGCGGAAACAGCAGCGCATCCTGGAACACCACACCGA

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCGTTCCCCGCCCACGCGGGGATCAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.00,-12.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [23.3-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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