Array 1 28504-27744 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBSJ010000019.1 Blautia producta strain UOC.14.97 NKPAGDLM_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 28503 32 100.0 34 ................................ CGAATAAGGTAGTGGCCAGGATCTGGGATATGGA 28437 32 100.0 33 ................................ TGGGTTCCGTAGTCAACGCTGACATATCGGTTC 28372 32 100.0 36 ................................ TTCGTTGTGAATTACAATCCCAGTTTTATTGCCCAG 28304 32 100.0 34 ................................ CTGCCAGACGTATACACGCCATGCGCTGCACAAG 28238 32 100.0 35 ................................ ATCTTCCGGCACCTTAAATAACACTTTTGCCGCTG 28171 32 100.0 33 ................................ AAAAACATAGTGAGCTGCTGCCGATAATATTCC 28106 32 100.0 34 ................................ ATTGCGGGGATGTCTTGTTTTTTGTCTTCCCCGC 28040 32 100.0 35 ................................ TTGCACTCTTCTGCGTATCTTTTAACTGCTGTCAT 27973 32 100.0 34 ................................ AACAAGATAAAATTGACCTGATACTTGTGACAAA 27907 32 96.9 34 ......A......................... AATGCAGAGGTCAGGGAAGCAGAAGCAGACAGCG 27841 32 87.5 34 ......A..............CAT........ ATGTGGAATAGAAGCTTGAATTTCCATTTCCATT 27775 32 84.4 0 .............T...A..AC..G....... | ========== ====== ====== ====== ================================ ==================================== ================== 12 32 97.4 34 GTCTCCGGCTTTGCGCTGGAGTGGATTGAAAT # Left flank : ATATGGGGATGATAATGGGATTTATAACAGCGGAGACAGGCATGTGGCCTAGAGTGTGTTTGAAAATTCATTCCGACAATCTGCACGCCCCACTTTGCGGTATATTTGCCCCCAATTCGGTCAACGTAGCCCGCTACGCCTCCCTCATCAGGGTCAAAGACGCACAGCTTGCCGAAAGCAATTTTTAAACACACTCTAGAGTCCTGGGACTAGAAGGAGAATTCCCGGACGGGGAATATCAAAAATATTTTTGTGAAGAGTATCCTTTGGGGTGGGAATAGGAGAAAATGTTTCTGGAATAATTGAAGGGAGGGTGTTATAATAAAACAATACAGGGTAGTGCGAAAGGTAAGTGAACATAAATATATGGAGGGATTCGCACTGATAAAAGAATGGTTTATGATTTGTTTTGGTAATGGGATTAGGGGATGTAAGTGTAAAATTGGATGTTTTGTATAAAAAATGGTGATTAATAATGTGGTTGTTTGGATAGAATTGCC # Right flank : AATTACATGGCGATGGCCGGGTGAAAAACGCAAGCTCTCCAGCTTCGCACTGGAGTATAAGCACAAAAATTACTACAAGCACAAAATACAGGAGATACCCATATGATATACCTGGAAACAGAACGTCTCATCTTACGGGATTACACGGAGAACGATGCAGAAGAGTACAGCAGACTTATGGCTGATGATCAGGTGATGTATTATCTTCGGGATATTCAACACCATTCCAGAGAGGAATCGGAAGAGGATTTTAGAAATATCCTTCTGGATATGCGGGAGAAGGACAGGCAAAGATATTTTCTTCATATACAGAAAAAAGATACAGGAGAACAGATTGGAAGCATTGGTTATACGGTCACGGATACAACTCCGGCAGGAAAACTAGTGCATCTGGGATATTTTACATATCCGAAATACTGGGGTTGCGGTTATGTGACTGAGGCGCTTGAAAAGGTAATGGAATTTGCTTTTTCCCAGGATGGTGTATACCGCATCACCAC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:0, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGGCTTTGCGCTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA // Array 1 2669-1843 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBSJ010000004.1 Blautia producta strain UOC.14.97 NKPAGDLM_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================================================================================== ================== 2668 32 100.0 34 ................................ GGCCCTTTTGGTTGGGGTTTGTCATCCACGAACT 2602 32 100.0 36 ................................ GTCATGGGTACAAAGACGGATTTGTCTGCGATCCGG 2534 32 100.0 33 ................................ TGTTATATGCTTAAAATAACATATCATCATTAA 2469 32 100.0 34 ................................ TTGATAACATATCCGAGTATTCCGTACAATTTCA 2403 32 100.0 36 ................................ ACATATACACCAGAGAATGCTCCTGCCAGCATGGAA 2335 32 100.0 34 ................................ TGCGGCCTCATTGTATGCGCTGAATGTGGACGTG 2269 32 100.0 34 ................................ ACTGTCGGTTTCCGTAAATACGGAAATATGTACT 2203 32 100.0 35 ................................ AGGACATACCTGATATTGAAAAATGACAGGTACAA 2136 32 100.0 34 ................................ TGGATAGCAGCGGTGTCCGGTACATAGCGAATGC 2070 32 96.9 34 ....................A........... AAAGTACGCCGTCTGGACAAGAACGACTTCGGCT 2004 32 93.8 98 .............TA................. GCAATACTATAACCTTTTTCTGTATTTGCCAAGTTCTTACTTTCACAATAGTGTAGAATGAGATGCGTAATGAAGCCATCGAAATTTAAGATTGAAGT 1874 32 81.2 0 .........C..A.A.A......A..A..... | ========== ====== ====== ====== ================================ ================================================================================================== ================== 12 32 97.7 40 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : TTAAGACAAACAATTACAAATCTATAATGAATATAGAGAGTCTTAATCCCTATTACGAATAAAAGTTAATCTATAATGAACATATTTTATGGATTTGAAGTATCCTGTCTATTGATACTGGGTTTGTTGTAACTTGTATTATTTAGATTGTTTTCTGTAAGGCTGGAGTGTGTTTAAAAATTCATTCCAACAAGCTGCACGCCCCACTTTGCGGTATATTTGGCTCCAATGCGGTCAACGTAGCCCGCTACCGCTTCCTCATCCGAAGCAAATCTCCCACAAAGTGTGACGCACAGCTTGCCGAAAGCAATTTTCAAACAAACTCTAGTGCGAATAGGAAGTGAACAGAAAAACATTGGGGGATTCGCACCGGAATTTAGAAAGGGTATGGTTGGATATGAGGGTGAAATATGAGAGTGGTTTGGCATAGATGGTAAAAAAATAATGGATGTTTGGGGATGTTGTATAAAAAGTTATGGTTAAATTTGTGGGTTTTTGCT # Right flank : TAAACTCAATCAAGTGTTCTCGGGCCGCATCAGTGAGTAGTAAAGTGAACCATAAGAAATATGACTAAGTGAATATAGTTTTTCAGAAAGGGGTGTGCAGAAGAAATGAATGAAAATATTAAAAAGAAACTTCCCATTGGAATAGAGAGTTTTGATAAAATCCGAATAGAAGATTTTTATTATATTGATAAAACTGGGCTCATTAAAGAACTTCTATACAATTGGGGTGAAGTTAATCTTTTTACGCGCCCAAGACGTTTTGGAAAATCTCTTAACATGAGCATGCTGAAAAGTTTTTTGAAATAAGCACCGATAAAGAGTATAAAAAAATCTGTTTGAAGGGTTGGATATTTCAGATGAAAGAGATTTATGTAAGGCATATATGGGAGAATTTCCGGTTATTTCAATCAGTTTAAAAGGGGTAAACGGTACTGATTTTTCGGCTGCACGCTCTATGATGAGTTCAATCATTGGAAATGAAGCTTTGAGATTCTACTTTT # Questionable array : NO Score: 8.65 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:-0.49, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 226462-227297 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBSJ010000006.1 Blautia producta strain UOC.14.97 NKPAGDLM_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 226462 33 100.0 34 ................................. GTCATCATCTTTACAATTACACTACTGTTCATTC 226529 33 100.0 34 ................................. AGGCAGAGCTGGTTTGCTGCTTTCTCCTGCAACA 226596 33 100.0 34 ................................. GCCACCATTGTTTTTCCGTTGACAGTAAGTGTAC 226663 33 100.0 34 ................................. TATAGACAGGGCAGTAGGGTTCTTTAATGACACT 226730 33 100.0 34 ................................. GTTCAAAGAAGCGTATATAAGTCTTGGTGGAACC 226797 33 100.0 35 ................................. AGGTATCATAGTGATCCAAACGGAAGCAAGGATTT 226865 33 100.0 33 ................................. GCCAGTGTGCTTGTTGGAATGCTCGGAGGGCTG 226931 33 100.0 33 ................................. TGCGGCAAGTACGCCGTAATTAATATATCCTGT 226997 33 100.0 35 ................................. TCATACCCGTAGGCTGTGGAGGCTGCTATGCGCAG 227065 33 100.0 34 ................................. GATTGTCGCACCCGTCTTCTGGACACAGGACCAT 227132 33 100.0 34 ................................. TCATTTCGAGGTGGCTAAAGGCACATCTCAACAA 227199 33 100.0 33 ................................. TCTGGATCACAAAATCAGGCATTACAACGGTAC 227265 33 97.0 0 ...........................C..... | ========== ====== ====== ====== ================================= =================================== ================== 13 33 99.8 34 GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Left flank : CAGCGGAGGAAGCCAGAAAGGAACCTCTTCCGCAAAAACCGGAGATGAAACGCCTATCGGTATGTTTGCAGGCTTTGGAGCTGTGGCACTGATCGCTATCTTCGCTTGTACACTCAGCATTTTGAGGAAAAGAAAAAAATATAATTAATTTTAACAATTAACAGCAAATAGCTCACTTATTATTTTAAATACTCCCAGCAGAAGATTTTTTTCTGCCGGGAGTATGAGACAGAGATAAAAGACTCTGTTGAATTGGAAAATATTTTTGATATTTGGAATAAAAATATCAGCAAGCAAAAGAATACTCCGCACATTTGTGCAGGGTATTCTTTTTTTGCAGGTGCGAATGTCAAGTGAACATGAAATACCAGGGGGATTCGCACCTATATTTTATTGGAAAAAATGTGATATATGTGTTAAAATAAAAAATAGATATATAGAATATGTGATAAGTGTGCAAAATTCCTATGAGTAATATGGAACATTTGGGAGATTTTGCT # Right flank : TTCCCGAAGTGAGAGGATTTAAGCATAAGTTCCCAGACAATTCCCATGTAGACATATGCGCCAATCTTCACAATCAGGGGCAAAATGTATATATACTACTTCAGTCCATTCCTTTTAACATCAAGCAATATTTTCAACAATATTTTACACTCAAAATTTCTTATACTGAAAAATGCAAATTTACATATTGCTTTATAACAAATTCATTGACACAAATAGAAAATCTAACTATAATAATGGCACAGTAACCCAATAATTTATATACAGCGTTAGTCCATGGCTGACGCTGTTTTCTATACAGGTACCTTGTTAAGGATATGACCAACTCTGCATCTGCTACTGTTTTTTAGTCATAAACAGTCTCAGTTGAACTGCTGACATGCTGCGTGCTGCTGCATCAAACTGTGAAAAATAGTAAAATCAGCGCAGTATAGTTGAGCATTCCACATCGTACCTGACACAGGTTTTGCGTCTGGGCGCGGACAAATAAAACTGTTGGA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCTGCGAGGAGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCACTCTCTGTATGGAGAGTGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 118741-117848 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBSJ010000008.1 Blautia producta strain UOC.14.97 NKPAGDLM_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 118740 32 100.0 34 ................................ ACCAATCCTGTCAGCAATCCTCTGGGCGTATGGT 118674 32 100.0 34 ................................ AAAGTAGCAGACATACACACGTATCTATGTATGT 118608 32 100.0 34 ................................ CTTTAAGTCGGCTAAATAGTCCTTCACGTCATCT 118542 32 100.0 35 ................................ TACTCCGGAACCCCCGGCTCCGGGAAGTCCCTGCA 118475 32 100.0 34 ................................ CGGTTGCACCGGATACGGCAGCCACTTTTGACAT 118409 32 100.0 35 ................................ AGTGTAGGCGTGCAGATATTGGCAAATGTACTACA 118342 32 100.0 35 ................................ TAAGAAAACATATTATTGCTTATAAAACGCAGATA 118275 32 100.0 33 ................................ ATCTGTACAGTCGTACACCGTATGGCCTTCCGC 118210 32 100.0 34 ................................ AGATTCTCAATGTCAGAAAGATATCTTACCAAAT 118144 32 100.0 33 ................................ AGGGACCAACTTGCACAGATACCGGAGGACGGA 118079 32 100.0 36 ................................ TGAATAAATCATATATATTTTCTATAACATTTTCAT 118011 32 100.0 34 ................................ AAAATAGTATCTATCAACCCATCGCGAAATTCGG 117945 32 93.8 34 .......T..................C..... CAGCAACAGCAGTTTACGTTCCCCATTGACACCT 117879 32 78.1 0 ........T......A....A.C.GC.....G | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 98.0 34 GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Left flank : TTGTGCCGATTCTGGAAGCTGGTAAATTTTTGCGTGTTGGCAAGGGGGCTACAATCGGCTTTGGACACTATGAAATTTCTTATGATAAATAGAGGAAAGAATGAAAAGATAGTTTAAAATCGTAGTTTACGTATTTAAATAAAGTATATTTGGAAATTGCTTATTTATCATTTTTAAGCAGAATAGAATGAGTCTAAATTATCAGCCCATTATTCGGTGGTGTTTCCATGGACTTCAATAAGGACTTCATTATTGCGGCAGTTCATATTGAAGGTAATAGGATAGGGACTCGGAGTTATAAGAGTTTTATAAATGTCAGGTGCGAATATGGAGTGAACATAGTTTTCCAGGGAGACTCGCACCTGAAAAAAGTATAAAAATGTGTAGTTATGGCGAATTTATGGATTATATTTCAACTTAAGGTTGCATTTTTTAGAGAAAAAGGTTAGAATTTAGTGGAAAGATACAATATTTATATAGTGATATTGTGCATTTTTGCT # Right flank : AAGTAAAAAGGATATTATTTGTATGTAATACGAACATCACCTCCCATGCACAAGTGTAGATCACAACTGTCTAACCATTGTCCACCATATATCTATTTGAACGTTCTAACCATATAAAATCGAAAATTTGCATTATAAAAATTAAATAGAATATTTCCGGACATTCAAAGCCGCTTCCTTTACAGAGTACAGTTTCATAGCCCTATTCTATCGGCACGCAATTTACTATAAAAAGCTGAATTTAAAAACCTACACATATAAAACTATAAAAATAAGTTACCAAAGGGAAGTTAAAATGGTGATTGCCACAAGAAATGATATTTTCACAAAAATTCATGAGCATAGAAATCAAAACGAACATTACCCTGGGTAAGACAAGGAATCTTCACCCTATTCTGCAGAAAAAAATACTCCTTTTTGATAAGGATCACCATACTGGATTCTTACCGAAAAGGAGTTATTTATACCCCAAAGCTTAACAGCTCTGTCATTACACATTC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 18480-17590 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBSJ010000016.1 Blautia producta strain UOC.14.97 NKPAGDLM_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 18479 32 100.0 35 ................................ CACCGGGCCAATGATCCCGGCAGCCAGGTCGGCTC 18412 32 100.0 35 ................................ ATCAGTGGCCTGATTGCGGCGGCTGGATTTAGGAC 18345 32 100.0 35 ................................ TCGGGTTTCTGTGCCTTTAATACGCCCTTTATCAT 18278 32 100.0 33 ................................ ACCCACCCGGCGGGGTAACGCCGGGAGAAAGGA 18213 32 100.0 35 ................................ CGCAGCATCTCGTATAAGCCTGTACTGGCCAGGCC 18146 32 100.0 35 ................................ ATTCTCTGCATTTGCAAGGATATCTGACGCTATCC 18079 32 100.0 34 ................................ ATCTGACTTTACGGAAAATCAAATGGGTGCAGAA 18013 32 100.0 34 ................................ CCTGGGGGCCTCCGGGAAATGGACTGGCGGAAAA 17947 32 96.9 34 ..............T................. TTTTAAATAAAGTTCGGACGTATGAACTTTATTA 17881 32 100.0 34 ................................ ATATCTGTATTTTTTTGTCTTTTATATCTGATAC 17815 32 100.0 33 ................................ CAAGTTGATTTTTTACCATTCCAGTAAACATCC 17750 32 100.0 32 ................................ GCAAATGCAGCAATCTGTGTATAACTGCCTTT 17686 31 93.8 34 ...............T..........-..... TATACTCATCGACAGGCAAGAATAGCAATCGTTA 17621 32 84.4 0 ...T..G.......A..A.T............ | ========== ====== ====== ====== ================================ =================================== ================== 14 32 98.2 34 GTCGTCACCTTCGCGGTGACGTGGATTGAAAT # Left flank : GAAAGGATAACGCCGCCTAGAAAAAGAAAAAACAGGTGGTTCTTAAGTTCAGGCAAAAATACCGCAAAAGCTACTGCGCCGAAGCCATAAGCCGGACAATAAGGTCCGAACAGAAAACCAACGTCAATAAACCGATGTTCCCTGACTGCTGCAACTGACGTTCCAATAGCCCAGCCGATGAAGGAATAGAGTAAGAAAAACCATAGAAGTTGATATAGTGTGTAGTTCAAGTGAGGCCTCCTTTGGGGATGATGTTGGATAATGGTGGTTTTAGTATACCTTATACGCGGATGGAGGAGATGTCAAGTGTAAGAAGGCGGAGGTTTTTGTGCGAATCGGGAGTGAACAGGAATTTGCAGGGGAATTCGCACCTGATATTGAGGTGAAAAGAGGTGGGGGGAATGATGAAAAGAGGTGGAGAGTCGTGTTTTTAATTGTAAATAGTGGGAAGATGTGATATTATATACAAAAAGTGGTGGGGGTATTTAGGTATTTTTGCT # Right flank : TTAAGCTTCTCTTACTAAAGTAGGCTTTATTTCATTTTCGATTTTTATAAATGAAATTATATTTCATATCAATTCATTAACCGAATACTGTTTACGTTGTAAAAGTTTTTCATCCACCCATACATTAAGTAATAATTTGCATTGACATACAACCAAATTTCCCGGCATACATTGTAAAAACAACGTTTCCGGGAGATTTTTCCTTGAAAAGTTATATAGAAGAACGTGCTATATCCATAGCCAACTACATCATTGAAAACAACGCAACTGTCCGTCAGACAGCCAGAGAGTTCAAGGTCAGTAAAAGCACGGTACACAAAGACGTTACAGAGCGTCTGCTGCAGCTTAATCCTTCACTGGCCAAGTGTGCCCGCAGGGTCCTTGACGTGAACAAGCAGGAACGTCATATCCGGGGTGGTATGGCTACCCGGGAAAAATATCTGCACAAGGTGCAAAAATAACGAAAGAGACTCTTGTTTTGAGAAAAATATGGGCGTATA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCACCTTCGCGGTGACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : NA // Array 1 111102-110647 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBSJ010000017.1 Blautia producta strain UOC.14.97 NKPAGDLM_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =================================== ================== 111101 25 76.0 35 ....CA.A...........CTC... ACCTACCAAGTACCAACCGGTCTTCATGCCTCCGT A [111090] 111040 25 100.0 35 ......................... GCCCAGAGACAACCATCCCTGTGCCATAGCTCCAT G,GT [111032,111035] 110977 25 100.0 35 ......................... GCCAGTCATGAGCCAACCTGTCTGCATTGCTCCGC 110917 25 100.0 35 ......................... TTTCTGATTCAACCAGCCAACCTGCATTGCTCCGC 110857 25 88.0 35 ......G..A...G........... GTTTACCAATGCCCAGCCTTGTGCCATAGCTCCGC T,GC [110847,110852] 110794 25 76.0 35 ....AG.............A..ATT GCCCAGCAATAACCAGCCTGTCTGCATAGCCCCAC 110734 24 80.0 35 .G......T.-...........A.T GCCAACTTTATACCAACCGGTCTTCATCACACCGC A [110727] 110674 25 100.0 0 ......................... | G,GC [110666,110669] ========== ====== ====== ====== ========================= =================================== ================== 8 25 90.0 35 TTCCGTTCAGATAATACCAGGTTCC # Left flank : AGGTCCCCGCAGGAGTCAGCGTAATTGGATTACCTACAGAACAGGTAATTGACTTAACTGGTATAGTCCATCCATTACTGCCATCCTTTGCCAGAACAGTTATCTGACATTTTGTACGATTCACACGAAGTCTGTAAGGTCCGCCTACCATTCCACTTACATCCTGCTGTAAAGCTCCGCTTCCTGTAAAGTACATTTTATAACCCCTGATGTAATGCCATCCAGTTAACATGACACCATTTCCATCGAGATAATACCAATTTCCATTCCAAGCTACATATTCATTCTTAGCATAAGTACCGTTGCTCTTCTTAAAATAGTATGTGGATCCGCTCTTTTCCCAATTTCCAATGGTATTTACATTTACTGTACCATAACCTGGTATCCAACGTCCATTTTTATCAACATAATAGCCGCCAATTGTAGTATCTTTCAGCATGGCTCCGCTACTGCCCACATAATAGTAAGTATCGATCCAAGCATTTCGGGCCATAGCTCCG # Right flank : GTTTATCTTTGCCCAACCCTGAGCCATAACCCCGTTGTCATTCAAATAGTACCAGTTATTTCCCAGTGCAAGCCAGCCAGTTTTCATATATCCGTTGCCGTCAAAGTAATATTTCTGTCCTTTTACTGTATACCAGCAGTTTGCCGGCCAGCTTCCGTCTTCTTTCTGGTACCACCATCCGGTCGTATTCTGCTTCCATCCTTCCGGATAAACTTTATAAGATTTGGTACATTTACCATCTTTGTCAAAGAAATACCTTACCCCTTTTACAACAACAGATGTATTTTTCTTAACCGTGCCATCTTTATTCACGTAATACTTCTTACCATTGATGGTCTGCAGTCCGGTTTTGGCTGTCTGTTTTCCATCCGCACCAAAATAGTAAAACTTCTTACCGTCTGCTATCCATTTGGATTTGGCATAGCTTCCGTCTTCATTCATCCAGTAATTACTGCCGTTTATTTTCTGAAGACCTGTTTTGCCCTGTGTCTGCACACCAT # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.43, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCGTTCAGATAATACCAGGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //