Array 1 292158-293590 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQLW01000004.1 Citrobacter braakii strain S1278 scaffold4.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 292158 29 100.0 32 ............................. GCGGTAATTCAGGCAATGGCCGGTCGTGGAGA 292219 29 100.0 32 ............................. CCCCTTCGGATACCCTTTCGATTTCGCGCTTA 292280 29 100.0 32 ............................. TACCCTGAGCGCATCATCGAGGCTATCCAATA 292341 29 100.0 32 ............................. GCCTGTTCATTCCCGACGTTATGACGAAATAC 292402 29 100.0 32 ............................. TCAACGATGACGATTGTATTAACATTTGAACC 292463 29 96.6 32 ............................A TGGTCGTTACCCGCACCACGCGATCAGCACTC 292524 29 100.0 32 ............................. CGCGAAACCTGGCGAATAGCGAGCAGGGCGGC 292585 29 100.0 33 ............................. ATATTTTTTGATAAATTGAATATCCTGCCATGG 292647 29 100.0 32 ............................. TTCATTTGGCCTGCCAGCGCCATCTGGATGAT 292708 29 100.0 32 ............................. GCCTGCGCGAGCCGCAGAATTAGACAATGAGG 292769 29 100.0 32 ............................. GCCAAACGGGCACGGGTTCGCATCACATTCTC 292830 29 100.0 32 ............................. ACAAACAGTAGCAGAGCACCCCACACCGGGTA 292891 29 100.0 32 ............................. TGGAGCGGCCGCCAGGTGATTGGCGGTATTGG 292952 29 100.0 32 ............................. TTAAAGGAGATTTGGGGAGGGGTTGTTTCGTT 293013 29 100.0 32 ............................. CACTGCCGATCAATACGAGCGGCTTCTTTCTA 293074 29 100.0 32 ............................. ATATCTTTGGTTGTCTTGCGTTCTGCATGCAC 293135 29 100.0 32 ............................. CCGAATTTCTCAGCAAATGCCCACCAGTCGCG 293196 29 100.0 32 ............................. AATCAATACCACGTTACCCCGGCGGACAATGA 293257 29 100.0 32 ............................. GCCGTTTTACGATCGCTTGTTACCACGTTGGG 293318 29 100.0 32 ............................. CCGCTGGAGTCGATTAGCTTGGGTGAGTTGAT 293379 29 100.0 32 ............................. TCAACGACATTATTTTTCTCAGGATAACTGAT 293440 29 100.0 32 ............................. TTTGGGGTTCGGTGCGTCATTTGTGCATAACG 293501 29 96.6 32 ............T................ TATTCAGAAGGAGTTCCTTTACCTGCTCTGAC 293562 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================= ================== 24 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGTTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCTGTCTGGCTGCTGGAAATCCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACTGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAAAGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCAGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //