Array 1 29086-20616 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMQ010000047.1 Myxococcus sp. CA039A NODE_47_length_44437_cov_34.2777, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================================== ================== 29085 37 100.0 34 ..................................... TGGTTCACACAAGCCGAGTGGGTGAACAAACGTG 29014 37 100.0 35 ..................................... CCTCCTGGCAGCTCCGCGTCGGCATACGGCTCGTC 28942 37 100.0 35 ..................................... CCTCCTGGCAGCTCCGCGTCGGCATACGGCTCGTC 28870 37 100.0 34 ..................................... AATCCAAACCCATACGTGAGAGTTACTGGTACTG 28799 37 100.0 35 ..................................... AACAAGACGCCCTCGGAAGTGCGCCACGCGGGCCA 28727 37 100.0 35 ..................................... CAGATGCGGTAGTCCACGGGAAGTCGGCACCCCGA 28655 37 100.0 36 ..................................... TTAGCGTTCATCACCTGTCTGTAACCTCGTGTTGGG 28582 37 100.0 35 ..................................... GAGAACCTAAAGAAAACCGCCGCTGAACTGGCCGT 28510 37 100.0 35 ..................................... TGGCCGTCCCTCTCCTGGTACGAGGAGCATCCGGA 28438 37 100.0 33 ..................................... CCTGAGGAGGACGCATGACGACCGAGCCCCGAC 28368 37 100.0 33 ..................................... ACCACTGACGTCTGGGATGTCGAGCCGCAGGAG 28298 37 100.0 33 ..................................... GAGCACGCGGCGCAGATGCCATCCACCAGCTTG 28228 37 100.0 38 ..................................... ATTCGCATCGAACCTTTCGGCTCGGATAGCCCGACCGA 28153 37 100.0 34 ..................................... AGCAAGGCGGCGGGATTCCCTGCCGTCGTGAAGG 28082 37 100.0 33 ..................................... AACGAGTGGAGACGCCCGCGCCTGCGCCGGACT 28012 37 100.0 38 ..................................... ACAGTCTACGATTGCGTTGCGGAACGGATGGGCGTGGC 27937 37 100.0 34 ..................................... CGAGGATGCGGCCCGGCTGGGTCTCCCCGAGGCA 27866 37 100.0 33 ..................................... CGCACATCGGTGGGCCGAATGAAGGCACCAGAT 27796 37 100.0 35 ..................................... GACACGAAGGGGAGGCCCGCGTCCTGGCGAATCAG 27724 37 100.0 39 ..................................... GACCGCGGAACTGATGCCGTCCCAGAGGTCGGAGAAGTT 27648 37 100.0 34 ..................................... ATCGGGATGCGGTCGCGGCACCGGGACTTGGACA 27577 37 100.0 35 ..................................... ACATCGCAGTACAAGCCGGGCACGACGCCGTACAC 27505 37 100.0 35 ..................................... GAGAGGAAGAGGCCGCTCGCTGAGAAGACGATGTG 27433 37 100.0 33 ..................................... CCGGTGTGGATGCTGGAGGAACTTGCCGTTGTC 27363 37 100.0 33 ..................................... AAGGCCACCGCCGAACTCTTCCAGTTCGGGGCG 27293 37 100.0 33 ..................................... AACGACAACTTGTTGAGTTCGGCGCGCACGTAG 27223 37 100.0 33 ..................................... GTGGTGTACCCCACGCCCTCAAGCACCGACACG 27153 37 100.0 35 ..................................... CGAAGCGTACAAGAGCGCGATGGGCGACCTCGGCC 27081 37 100.0 41 ..................................... GCTTCGTGCTGGCCGGACGCACGTTGGAGGTCCTCTCCAAT 27003 37 100.0 35 ..................................... CGAACCAGGTCGCTCCAGGTCGTGAAGCTGCCCCA 26931 37 100.0 34 ..................................... CTGGAGCCGGTCCGGTGAACTCCCTCGTCGGACA 26860 37 100.0 32 ..................................... CGCCGACAACGCGTCCGGTGTCGCAGCGACTT 26791 37 100.0 34 ..................................... GTGCGGTGGTGGACTCGGCCGCAGTGGACCCGCC 26720 37 100.0 32 ..................................... AGCACCTGTCGCCACTCCGGAGCCGTAGCCAT 26651 37 100.0 33 ..................................... GCGTCTGCCTCGGTGATGTCGTGCAGGCGCTCG 26581 37 100.0 33 ..................................... CTCCGAGGTACACCATGCTTCGCCCGTATAGGC 26511 37 100.0 34 ..................................... TCTCTCCAAGCGGCGGCACGGTCCGCGCGCCACA 26440 37 100.0 34 ..................................... ACCGTTGGCCTTGCGCAGCATGCTTTGCGACGTC 26369 37 100.0 34 ..................................... CGGACCGCCCAGCCCTTCTGGGTCATGCTCAACA 26298 37 100.0 33 ..................................... GTGTCGTGCCTCTGCTGGCGGCCGTCGACCGTG 26228 37 100.0 34 ..................................... GTCGTGGAGCCGCATCTACACAGCAGCGGACGGC 26157 37 100.0 35 ..................................... CCCAGCGGGACTGGAGTTGGCCGAGGCGCTCCTTG 26085 37 100.0 34 ..................................... GTCTTCATCCAGGTCGAAGCCAGCGGGGAGGCGT 26014 37 100.0 34 ..................................... TCAGCGGCGGCACTCGCGGGGCTGGATGCAGTCT 25943 37 100.0 33 ..................................... ACCGCTCGGGGACAGCACCGTTACGGCCATGGG 25873 37 100.0 34 ..................................... TTGTTGGCGATGTCGGCGGCCGAGCAGATGGGCG 25802 37 100.0 32 ..................................... TGCGCGGATGGGTGGCCCCGCCGCCGCACGCA 25733 37 100.0 35 ..................................... CGAGTCTCCGTCGCGAACACGGTTGAATTCGCGTT 25661 37 100.0 34 ..................................... TCGTACGGCTCAAACCTCCCGCTCCCGCAGCGCG 25590 37 100.0 35 ..................................... AACCCCTCGCGGATGAGCGTGGCCTCGGAGCCCGT 25518 37 100.0 34 ..................................... CTGGAGAACGTCGCCGAGTTTCTCACGTGGGGTC 25447 37 100.0 32 ..................................... GTCGAACTCTCCGGAGCGGCCGGAGGGTTGGA 25378 37 100.0 32 ..................................... CCGAGTCTGACGGACGACGAGGCACAGGCCGC 25309 37 100.0 35 ..................................... CGCGATGCGCCAGAGCGTCTTCTCCGCGAGCGGCT 25237 37 100.0 33 ..................................... CTACGCACGGCACCGGGCGCCAGCGTCGCGCTC 25167 37 100.0 32 ..................................... ATCGACTCGGTGGCGGGCCCGCTGACGATGTC 25098 37 100.0 33 ..................................... CGCGCTTACCTGTGCTTGCGTGGGTGCCATGTC 25028 37 100.0 33 ..................................... GGGTTCCCGGTGACGCGCCCGGAGGTGAGGGTG 24958 37 100.0 35 ..................................... CTCATTTGCGGCTGCATAGAACGGGATTCGATGTA 24886 37 100.0 32 ..................................... CTCACCATGTCTCCCGTGGACCGCCAGCTGTA 24817 37 100.0 33 ..................................... GAGGAGTTTCTCTCCGCGAAGCATTCGGAGGAG 24747 37 100.0 37 ..................................... GCCCTGTCATGCGTCCTCCCCCTCGTCTGGCACGGTG 24673 37 100.0 36 ..................................... TTCCCGTGCCCCGTCCGTGACGCGAGAGGCGGGGAA 24600 37 100.0 34 ..................................... CCCGAGGAGAGTCACGAGACCTACGCGCGCCGGC 24529 37 100.0 36 ..................................... TACTCGGTGGCCGAGCACTGCGTCCGAGTCAGCCAG 24456 37 100.0 34 ..................................... CTTCTCCTTGAGTTCGGACGCCTTGAGGCCCGCG 24385 37 100.0 32 ..................................... ATGGGTGATGCTCCTTGGGGTGGTACGTCTGA 24316 37 100.0 37 ..................................... ACAGCATCACCGTGGGGTCGATGCTGCGCCCGGTGTA 24242 37 100.0 33 ..................................... CCGAGCAACCGGAGGAGGTCGATTCGGCCAAGT 24172 37 100.0 33 ..................................... CTCCAGTGCTGCGTGTGAGTCGCGCGGTGGGGT 24102 37 100.0 33 ..................................... CCGGCGCCGCTGGGTACACGGCCGGAGTGCAGA 24032 37 100.0 32 ..................................... CAGCAGGCGACCCCGACGCAGCGTGGGCGAGT 23963 37 100.0 34 ..................................... TACCTGTGCCGGGGGATGGGATGACCCTCCGCTC 23892 37 100.0 34 ..................................... ATGTTGCCGGACGCGTGGTACGCCGGGGAGGGCA 23821 37 100.0 34 ..................................... TTCGTCACGATGCCGGCACTGGCGTTGAACCGCA 23750 37 100.0 34 ..................................... AACAACCGCATCCGGACCAAGTCCGGCGTCACAA 23679 37 100.0 35 ..................................... AGGGTGTCGGTGCCCTCGCAGCATGCGCGGCGGAG 23607 37 100.0 35 ..................................... TGCCGGCACCACATCCGCAACCGAACCCGTGTCCT 23535 37 97.3 33 ....................................T ACCATCTCGGGCGCGGCAGGCTCGGGCATGACT 23465 37 100.0 36 ..................................... CAGTCGAAGTCCTGCCACGGAGGGACGATGGAACGT 23392 37 100.0 37 ..................................... GTAGTACGCCCGGCCCGGCTCATCACCAACCTCGAAG 23318 37 100.0 34 ..................................... CTCACGTCGTACTACGGCGAGGACGCCACGAGTG 23247 37 97.3 34 ...............A..................... CGGGGAAGAAGACTGCGAAGCCCGCAGGGCCGAA 23176 37 100.0 33 ..................................... GTGATGCCGAGGCTGTGTTGCGGAAGGCGGGGC 23106 37 100.0 34 ..................................... GGAGTCGACGACCCGATGACCCGAGCCGGCGCGG 23035 37 100.0 32 ..................................... CCTCTCCAGGTAGCAGACTGTTCGAGAGCCTG 22966 37 100.0 33 ..................................... CAACCGACAATCTTCGTCGTCGACGCCGATGAG 22896 37 100.0 34 ..................................... ACCGACTACAGCCCGACCAACTGCGACTAATGCG 22825 37 100.0 34 ..................................... AACCCGGCGCAGCTCCACGTAGCGGAGTCCAACA 22754 37 100.0 82 ..................................... TCGAATCCAGGGACGTTCTCCTCGTTCGAGTAGCGTGGGTTGAAACGAGGATCGCGGCGAGGATGTGGGATTCGGGCGTCTC 22635 37 100.0 35 ..................................... TGGGACTTGGTCCTCGGCATCGAGTTGGCCGGGTG 22563 37 100.0 36 ..................................... ACCGTCACGGCGCCGGAGTAGTGCCGGGTCAGGTTG 22490 37 100.0 34 ..................................... CGGTGGAGCCTCCAGCTCGCGGAGGCCCACCAAG 22419 37 100.0 32 ..................................... ACCGCCACGTCGTAGAGCTTCTTCGCGTGGTT 22350 37 100.0 34 ..................................... GACTCGGAGTACGCCACCCGCGTGGAGGTGGAGA 22279 37 100.0 32 ..................................... CTGGCGTGCCGCTCGCGACGTGGGAGTACACG 22210 37 100.0 32 ..................................... CTTTGCGCTGCTATCAGTACTGGTACGTAGCC 22141 37 100.0 34 ..................................... AACGACGTGTTGATTACGCGCCTCCACCCGGGAG 22070 37 100.0 36 ..................................... GATGAGGTGACGACGGCAGCCCGCTACCTCGGCCAG 21997 37 100.0 34 ..................................... ATCGGGCGGGTCGCTGGGGCCGCTGACGCCGCAC 21926 37 100.0 33 ..................................... GCATGCCCAGTTGTGGACCGCGCCACCTTCGGG 21856 37 100.0 36 ..................................... TGGCGAAGCTGGACCCGGTGCCCACCACTCTCGGAG 21783 37 94.6 33 .......................AT............ GCCATCCACGCGCGGTAGCAGTCGAGCTCAGTC 21713 37 97.3 33 .....C............................... TCCCAGCACGCATAGCGGTGGCGCAGGAACCCC 21643 37 100.0 34 ..................................... ATGGAGCTGCCGGACGCGCTGCGCGAGCGCCGCG 21572 37 100.0 34 ..................................... ATGGAGCTGCCGGACGCGCTGCGCGAGCGCCGCG 21501 37 100.0 36 ..................................... GTCGCACCGACGAAGGCAGCCACCTGCCGGGCGAAG 21428 37 100.0 35 ..................................... TCCGCAACCTCATCGCCAAGCCCAGGGCGGAGCTG 21356 37 100.0 34 ..................................... AGACCATGTCCGAAGAGGACGCCGACGCCCTCGT 21285 37 100.0 34 ..................................... AACACCACCAGCCTCGACTACCCGCTGGAGCCCA 21214 37 97.3 34 .........T........................... GCCAGCGAGCCCTCACGGCGCCTGTCCCGCTCTC 21143 37 100.0 35 ..................................... CCGCTCCCGGTCATCCCGAGCAGCATCAATACTTC 21071 37 100.0 33 ..................................... GATGGCTTCCCCTCGCCACAGTATGTGGAGACG 21001 37 100.0 33 ..................................... CAATTCGAGCTGGGTGACAAGTTCTCCGCCCCG 20931 37 97.3 33 ......T.............................. GGCTATGCGCGTGGCGTCCACCACGGGGCGCTG 20861 37 94.6 32 .......T..............T.............. TTGAGCTCCAGGACGTACTCTCGAACCGTCAT 20792 37 100.0 34 ..................................... CCGATGCCGGGGATTGCCTCGCGCTTGAGCCACT 20721 37 100.0 32 ..................................... GTCAGCGTGTGCTGCGTGACTCTCGCCGTGCA 20652 37 75.7 0 ........G.....T.T.CT..G...C..A......A | ========== ====== ====== ====== ===================================== ================================================================================== ================== 119 37 99.6 34 GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Left flank : AGAAAGGTCACCGTGCTCGTGTGTTACGACGTCCGGGTCTCCGACGCGGAGGGGCCACGGCGGCTCCGGCGGATTGCTCGGGCGTGCAAGGACCATGGCGTCCGGGTGCAGTATTCGGTCTTCGAGTGCGTGCTGGAGCCGAAGGACTGGGTGGTCCTGCGCGCACGGCTGCTCGCGGAGCTGGATGATGCGAGCGACAGCCTGCGGTTCTATTTCCTGAGCGAAGATGTCGCTCGGAAGACGGAGCATCATGGCGCGAGGATTCCACTGGATGTTGAGGGACCGCTCATCCTCTGAGTTGCTCGCGTGCCCTGAATGGGGCGCGCGGACCTGTGCTGGTGTGGGCTTCGTCGGAGGTTCGCGTTCTTTGAAAGCTCCAATAGTCTTCAGAGGTTGCGCGGGGTTTGGAGCCGCCGACTCGGGCCGGGTGACTCGAGTGGAGCCAGGTTCGCGCGAAGCGGCTGGATTCCCTTGGAGTTCTGGTAACTTGGAAGGGCAGA # Right flank : GCCCGCTTCGACTGGCGGAGAGGACTTTGGATTTCTTCGATGTCCGCATCCAGAGGTAGATGCCTCCGGACCTTCCTGTGCCGCAGCCCTGGAGCCAGAGAGCCACTTCTGAATGGTAGACTCTCGCAGTCGGTTCGGATGAAGGAGCCCAGGTGCAGCGACATGCGAGAAGGATGTTGATGTCCCTGCTGATGGGCTTCAGCGTCCTCGGCGTCGTGCGAATACCGACCGCACATGCGGAGCCTCCCATGACAAAGGCCCCTGCATGCATCAAGCGTGGATGGCCCGCGTCCGTCATGTGCGGAGGCACGGCGTGCTTCGTTTCGAGCTGCGGCGAAGGAAGATGCCCCTACTGCTTCATCGAGGGCATGGAGAATCTCGCGATCAAGGGATGGGCCGTCTACACATGCTTGAGTGGTGAGTCCGTTACAGGCAAGGCGCTCCTGTTCCAGACGCTACCCTTCGACGCCCGACTGGGGCCCTTCTGTGGGTGAGCCTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.50,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 2423-2191 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUMQ010000175.1 Myxococcus sp. CA039A NODE_175_length_22780_cov_24.9887, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2422 31 96.8 35 ...............A............... GCGGGTTCGGCGCCCTCCGCCTCGGGCGGCTTGGC 2356 31 100.0 38 ............................... GGGGCTTCGGCGCCGGGCGGAGGAGCCTCCGGCTTCGG 2287 31 90.3 35 ...C....................C..G... GCGGGCTCGGCGCCCTCGGCTTCCGCGGGCTTGGC 2221 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 4 31 96.8 36 CTTGGGCGGACGGCCGCGCTTCTTGGGCGCG # Left flank : CAGGCAGTGGTGCAGCTCCCAGAGGTGGCCGAGCTGGTGGAGCGCGTGGCGGGCCACGGGTTTGAAGCCGACCTCCAAATCCTTGTGGGGCAGCAGGGTGATGACGGCGCGGTCCTTGCCCTGGCGCGCGAAGCCCGGGGTGGGCGCCACGCCGCTGGGCAGCTCGCGCTCCTTCAGCTTGCGCGAGGTGAGCAGCAGCACCTTGTCATCCTGGTAGGCGCGAATGCCCTTCACCTGGTCCAGCAGCTTCTCGGCGTCGAGCGGCTCGCCGAGCCCGGGAGGAATCTCCGCGGTGCCGGAGTGCTCGCTGCCCACGCCGAACGCCGTGTAGAGCGTGCGGTTGAGCTTGGCGAGCTGCTTGTCGTCGAAGGGGTCCAGCGTCACGACGCGAATCACGGGGCGTCACCTCGGCGCAAAGGGCCCTCGGGAGGGGGCCATGAGCACCGCCCCCGGGACTCGGGTGTCGACTGTCAGTCCTCGCCACCCTCGGCGGGCTTCGC # Right flank : TCTTCGTCGGAGGACTTCTCCTCGGACTCCTCGCCCTCTTCCTCGGAGGAGGTCTCTTCCTCGGACTCGGAGGCCTCGGCCTGCGGCTCCTCGTCGGAGGGCAGGTCCAGGTCTCCGTCGAGCCCCAGCAGGTCGCCATCCAGACCCAGGTCGTCTTCTTCTCCGCGCGCGAACTCGGCGGCGGTGCGCTTGGGGCGCTCGCGGCCGGGCGGGAAGAGGACGATGTCGATGGCGTCCTCGGCGTTGACCTCGGCGGTCCCGAGCGCGGCGGCGACCTCCGACACCAGCAGGTGCCGGGCGTTGTCGTACAGCTCGCGCTCCTTGGTGGGCAGGGGCCGCAGCTCGCTGAGGATCTGGAGATCCTTCACGACTTCGGCCAGTCCCAGGATGCCGCCCTGGGTCATCCGGTCCAGGTTGGTGCGAGCGCGCTGCTTCCAGTCCAGGTCGGCCTTGTCACCGTCCGAGCGCAGGAAGGCGAAGACGCTCTTCACGTCCTCGGC # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGGGCGGACGGCCGCGCTTCTTGGGCGCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //