Array 1 12780-13449 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AHLA01000017.1 Staphylococcus epidermidis VCU117 contig00027, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	====================================	===================================	==================
     12780	    36	 100.0	    35	....................................	TCTATCGTATTCCCTTTAGTTTCATCATTATTTGC	
     12851	    36	 100.0	    34	....................................	TGAATCATGTTCGCTATACGTTCCGGCTTTTCTT 	
     12921	    36	 100.0	    34	....................................	TTTAATTTGTTTGCTCGATTGTGGGTTAAGCTAG 	
     12991	    36	 100.0	    35	....................................	AATAAGGTCGTAAACTTGTTGGTAACTATCTTTTA	
     13062	    36	 100.0	    34	....................................	AGATTTCCTTACGACTAAGACCTAAAAATTCTTC 	
     13132	    36	 100.0	    35	....................................	GCTCCTTTTATATATTTTATTTTGTCATTATTTAA	
     13203	    36	 100.0	    35	....................................	CAATAAATCCATTTTCTAATACATAATAATTTTTT	
     13274	    36	 100.0	    35	....................................	TAGTAATAATTGTCATTTGCATACGTTACATCGAT	
     13345	    36	 100.0	    34	....................................	TAGTACGGTCGTGAACATTTTTTCTTGATTCTCT 	
     13415	    35	  86.1	     0	........G...................G.-...GT	|                                  	
==========	======	======	======	====================================	===================================	==================
        10	    36	  98.6	    35	GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC	                                   	       

# Left flank :   AAAAAATAGATTTTCGTTTCTTATGATATGCAATTAATCCGACAAAAAATTAAGTATAATGAAAAATTGTAAGTTTCATGCGGTTCCTCATCTTAATTTCTATGAAATGAGGTACGACCTGAGGAGTAGGTTTACTGAGAAATAATGTATTTACGCTGGGGCTTCAAGTCCAATTTAGTTTTTACATTTCATACTTGCACATTATCAAACAAAATCAATTATTAAAATAGATGTTTAAGTATTTTTCTTCTTGTAGTGAGGGAACGTCTAATTTTTATTCGAAATATAAAAAGAAATGAAAGGTTAAATTAATATTAATTTTATTAAATGAATAGGCTAAACCATCTTAAATGTAGTATACTATTAATATAAATGTAATTATTATAAAATTTGTCAAAAAAAGTGACATATCATATAATCTTGTACTAGTGATTGTCATATTTTTTGACAGCAAAAATGATGCTTGAAATATAGTTGTGATGGCATTTGTTAAAGTATCG
# Right flank :  TGTAAATCTAACAACACTCTAAAAAATTGTAGATTTTGAATAAAATACGCATTGATTAATTTCTAGGGGATGGAAAAATGAAAGATGTTATTTATGTAGAAAATCATTACTTTGTTACTGCGAAGGAAAATAGCATTAAATTTAGAAATGTCATAGATAAAAGTGAAAAATTTTATTTGTTTGAAGAAATTGAAGCTATTATTTTTGATCATTATAAAAGCTATTTTTCACATAAATTGGTAATTAAATGTATAGAGAATGATATTGCGATTATATTTTGTGACAAAAAGCATTCTCCAGTTACACAGCTCATTTCTTCATATGGCATGGTTAATCGTCTTAAAAGAATTCAAAGTCAATTTCAGTTATCGGGAAGAACAAAAGATAGAATTTGGAAAAAGATTGTTATAAATAAAATTTTTAACCAAACACGATGTCTTGAAAATAATTTACATAATGAAAATGTTAAGCTGATGTTAGGTTTTGCAAAAGAAGTGAGT

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [14,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GATCGATACCCACCCCGAAGAAAAGGGGACGAGAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-7.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.65,0   Confidence: HIGH] 

# Array family : III-A [Matched known repeat from this family],   
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