Array 1 5461-6080 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSD01000226.1 Streptomyces leeuwenhoekii strain C34 c34_sequence_0230, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 5461 37 100.0 36 ..................................... CCATACCCACCCTCAACACCCAGGAGCCCCACCCAT 5534 37 100.0 35 ..................................... GTCGCTCCGGGGCGTCTCCCATGGGTGACCGTAAC 5606 37 100.0 36 ..................................... ACGTCGACTGTGGCCCCGGCCCGGAGCCCACCGCCG 5679 37 100.0 36 ..................................... CCGATCCCGGCGGGCAGGACAACCGTGCGGGCGGCG 5752 37 100.0 38 ..................................... CGTCTGGACGCTGCGGGGGTGCGGGAGATCCTGCGCGG 5827 37 97.3 36 .............C....................... ACTCCGCCCGCGGCCGCGAACCGCACCGACTCCCTC 5900 37 100.0 36 ..................................... TCCCACCCTTCCTCGGCGCCGGTGTGCCACTCCCAG 5973 37 100.0 35 ..................................... CATTTCCATGCGGCGCCTTCGAGGTGCCAGAGCTG 6045 36 83.8 0 ..........-.TC........A........T....T | ========== ====== ====== ====== ===================================== ====================================== ================== 9 37 97.9 36 CTGGCGGTCGTCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : GGTTTGGGGTAGTCCATGCGGTCCGGTGTCCCCTGTGTGGTGGCCACGCCGGCACGCCCAGGGCAGGGTGCCGGCACCGCCCCTGCCGTAGATGCGGCCGTCTTCACGCCGAACCCACCGAAGCGGTGAGGCGCTGCAGCGGCACGTCCATCTCAACACTGACAGGCGGCTGTACCGCGCCCCGTCCTATGGTGGTGGCAGGACGCCGTCGGCGCCGGCAACGCCACCACCGTCTGCCTGCTGCCTGTACTTTGGGTAGGCCCTCGACATCGGACAAAGTTCAGCCTCCCTATGACGATCGCGCATTTTGACAGTCTGCGACGCCTGCTACACGGCCGACGGTTGGATGTGTGTTCCTCCCTCATGCCTGCATCGGAACCGGAAGCACACACGCGACACGCGATTCGCACCTAATCTATATGTCCGCATTCGGCGGCTCTGTTACCCGACGCTCACGGACAGAGGAGCGAGCGATAGGCTGTTTCCACTGCTCAAGCAGG # Right flank : TGCACACCACGTCGGTGGCCAGGGTGTGTTGGCCTCCTGGCGGTTGCCTTAAGGGGCCGTTGATCGGTGAGTTGGACCTGCTGCGCCATCGGTCCTTCCTCACTCCTGCTGGCCTTGACCCGGATGCTGGAGAGGAGGTGGCTGCCAGGTCAGCAGGAATAGAACTGCTTCGCGGCTCGGTGTTCCTGGTGCGGGCCAGGGATGCGGGGGCTGCTGATTCGGTCTGTGGCTGGCCGGTGTCCGAGGGGGTGGATACGGTCTTGGTCTTGGCGCGGAGGGCGCCGTGCGCCGTGGTGGGGGAGGAGAAGGTTTAGTGGCGGGTGTGTTGTATGCGCACAGCTTGAGTGGTGTCTCGGGGGTGCGGCACACGCTGGAGGACCACTTGCGTGGTTCGGCTGCGTTGGCGCGGCGTTTCGGGGAGGTGTTCGGGGCCGGGGAGTTGGCGGAGTATCTGGCCTTGGTGCACGACGTGGGCAAGGGGGCGTGTGCGTGGCAGGACG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGCGGTCGTCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGACGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-15.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 15046-15954 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZSD01000226.1 Streptomyces leeuwenhoekii strain C34 c34_sequence_0230, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 15046 37 100.0 36 ..................................... TTGTCGCGCTGCGACCGGACCTCGGCCGGGATCTGG 15119 37 100.0 35 ..................................... AGCGCGCGGGTGAAGATCGGCATCACGGCCGGCTG 15191 37 100.0 38 ..................................... TCCACCGACGAGATCACTCGCGTCTCCAACCGGGGGGG 15266 37 100.0 34 ..................................... CCTCCGCACAGTCGTACGATGGCGAGCGTGAGCA 15337 37 100.0 36 ..................................... CTGTTCTCCGCCGACCGCGCCCACACCGATCTGGGC 15410 37 100.0 35 ..................................... AACGACGAGACGCTGCGCAAGGCGGCCGAGCTCGC 15482 37 100.0 36 ..................................... GACGTGCCGGGCTGTGTGGTCGCGCCGCGGGAGCAG 15555 37 97.3 34 ........T............................ ATGTGGCTGGACACGGACGGCTCCCAGCTGGCGG 15626 37 97.3 36 ...........G......................... ACCGCCGGGTGGGCCGTGCTCTCCGACACCAACGGC 15699 37 100.0 34 ..................................... GACGACTCGGGCACCGTCGCCGGGATCGTCACCG 15770 37 100.0 36 ..................................... TACGTAGGTGGCGCCTGCGTCGCGGATGATGGTTGC 15843 37 89.2 38 C.........C...T....G................. CACTCCGGGACCACGGCATCCGGGTACACGACGTCCAA 15918 37 89.2 0 C.........C.......TG................. | ========== ====== ====== ====== ===================================== ====================================== ================== 13 37 97.9 36 GTGGCGGTCGTCCTCCGGGACGGCCGAGGATCGCAAC # Left flank : CTCCCCTGGACGGCCGCCTGATGGACCTGCTGCTCACCTACGACGTCGACACCACCAGTCCAGCTGGCCAACGCCGCCTTCGCCGCGTCGCGAAACTCTGTGAATGCCACGGCCTGCGGGTCCAGAAATCCGTTTTCGAGATCGTCGCCGATGAAAAAACACTCCTCACCCTCCTGCATGCCCTCGACCAGATCATCGACTCCGACACCGACAGCATCCGGCTCTACCGGCTGCCCGCCGACGGCTTCGACCACGTCCAGACTCTCGGCATCGCACAGATCCAGCCCCATCGTGGAGACCTTGTACTCTGACGGGCCATGACGCCCGCTAGACGACCGACGGGCGGATGCGTCTTCCTCCCGCCCGCCTGCTTCGGAACCGGAAGCACACACGCGACACGCGGATCGCACCGAAGCCAAATGTCCGCATTTAGCAGCTCTGTCGCCTGTCACTCCACTACTCGGGAGCAAGCGGTAGGCTGATTTTGCTGCTCAGGCAGC # Right flank : CAAGTGGAAGCGCCTGATCTATGAAGTTTCCCCGTGATCTCGGACACGTGATCGTTACGCCGCGAGGGTGTGCTGATGCCGCTGCCTGGTCTCGGCCGGGGTGAGGTAGCCGAAAGTCCGATGCTTGCGCAGGCGGCGGCGGTTGTAGAAGGTCTCGATGAAGGAGAAGACCTCCGCTCGGGCGGTGGCCCGGTCGGGCCAGGTGCGGGTGCCGATCTCCTCTTTGAGCAGGGCCCAGAAGCTCTCCGCGGCGGCGTTGTCGAAGCACGATCCGGTGCGTCCGCAGCTCTGCCGAAGCCCCAACTCTCGTATCCGTTCCCGGAACCGGGTCGACGTATATTCGCTGCCGCGATCGCTGTGGATCACACAGCCGGTCTCCAGCCCGCCCCGGCCGTGGGCCATGTCGAGGGCATCGACGACGATCTCAGCGCGGTGGTGGTCGGCCATGGCGTAGCCGACGACCTCCCGGGTGGCCAGGTCCAGCCAGCAGGCGAGGTAGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGTCCTCCGGGACGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGTCCTTCGGGACGACCGAGGATCGCAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //