Array 1 175147-175769 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 175147 29 96.6 38 ...............A............. TTGGGTAGTCTGTACCTTCTAGTAAATTCGTTGTCCCG 175214 29 100.0 37 ............................. TCTAATATTAAAACTTTTCCAAAGCCATCTTTGCTTG 175280 29 100.0 38 ............................. GGAAATAAGTCATTCATATTTGATGCCAATATTGTTCG 175347 29 100.0 38 ............................. TCATCTATATAATAATTATTTCCAATTTCTTTTAATAG 175414 29 96.6 37 ...............G............. AAACAACTACTAGAGTTATTAATATACTTACATAATA 175480 29 93.1 37 ........C......A............. ATGTTATAATAAACAATTTTTGTTTCATCAAAATTGG 175546 29 93.1 37 .....T.........A............. TAGAAATTACAAGAATAACAATTAGATAGTATAGGAA 175612 29 96.6 37 ...............G............. ATCCATAATTCAATATATTTCTTTACCCATTTACGTG 175678 29 89.7 31 .......A......GA............. TATAGAACCTTCTCTTTTGTCTAAATCATTG 175738 29 82.8 0 .......A......GG...A........A | TA,G [175761,175766] ========== ====== ====== ====== ============================= ====================================== ================== 10 29 94.9 37 TTGAACATTAACATATGATGTATTTAAAT # Left flank : ATAAAAAATATTCTTGGAAATTTAGATGAAAATATAAAAGAACTCTTTATAAATAATCCATGTATACAAGTCAATAATGAAAGAATTGGAATAGAAGAGATGAAAGAAAAAAATATACCCATAGAATTATTAAAATCATCTGAAAAGGAAATTGACACTACACTTGATGCAGACGCTAATAACAAGTAGTATCTATAAAGGGGGTGAAAATGATATGGTATTACTGAAAATAGAAATTTATATAACTAGATTGCTAGTATATATCTATAAAAATTTAACCTTTTTACCTCTCTTTATAAGAAATAAATTATTAAGATATATTTCAATAAAAACATTTGATATAACTGAAGCAATGCATAAAAGAAATTTGTTATAGATTTTTAAGGTACTTCTATTATGGGAGTACCTTTTATTTTTTTTGCTTACTTTAATTTTAAAACCTTGTAAAATCAATACTTCTATGTTATCCTTAAAAATAAGGAATGGCTATTTTACTATGG # Right flank : ATAATAATTGTAGCCTATGTTATAGTTATTATTTTTTATTCCTTAAAGGAATTTTTTAACATTTGTAGAATATTAAATATAATGCTTCCCAATGGGGTAATTATAGACCTCCGTATTTAAAAAAGAACTCCAATAATAAAATGGAGTTCTTTTTGTATGGAACTTTATATATTGGTGTTATGTTTTGGTAGTACCACTTTTGTATTATTTCATTGAAAAATGGTGTAAAATGTATGAATACTTGGGAAAAATTATAAAGGGAAAATTGTATAAATGTAGAAATTATATAATAAGAATCTGTTAATTTAAAATGATTTAACAGATAAAATAATATAAAGGGGGATGACTAAATGAAAAAAATTGTAATTGGTCTTTTAACAGCATTGATACTTGGGGTAAATGTATCTAGTGCTTATGCAGCAGAAAGTTGCCCAAGATGTGGTGCTACGGTTGGGCGAGGAGAAAATCATAAATGTTGCGATTATTTAGGTCATGATTTT # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATATGATGTATTTAAAT # Alternate repeat : TTGAACATTAACATAGGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 278899-279322 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 278899 30 100.0 34 .............................. TTTTTAACATAGTTACATATTTACGCTTTTTAAA 278963 30 100.0 36 .............................. AATTTTAATTGGCTATCAAATACTTTTTTAGAACTC 279029 30 100.0 36 .............................. GGCATCATTAAATTATAATATTTAATAAATTCTTCT 279095 30 100.0 36 .............................. ACGTTATTTTTACCTTCATAAGCTTTTAATAATTTT 279161 30 100.0 36 .............................. TTTGTAAACCCTTCTTCCTCTGTTGTTATTATTAAA 279227 30 100.0 36 .............................. CTATTTCTAGCCATTCTCTCTATATCAAATGTATCT 279293 30 96.7 0 ......T....................... | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 99.5 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAATATGTTCTTGGTTAAACCGTAAAGATGAACTTGTAGCAGCAGTAGCTATAGGATATGTAAATCAACCCCCTTATCCACGTCCACGTAAACCGTGGAGAGAAGTTACAGAATGGATGAGTTAATACATTTAACATCAAACAATAAAAACGGAGAATTATTTTAAATACCGTATTATTTATAATTGAGTTCCATAGTGTTTTTACACCGCAATACAATTATATTGCAAAGTTAGATGTATTTAAGTAGTAAATATAAATCTGAGATTTAGTGTGAGGTGCTTACTCATTTGAGGAAGCGAGAAGGCGTTCTACTAACTGAATTTTTCCAGCCAAAATAAATTTTAAAACCTATTTTGAGCGTTGACACATAAGGCTTATGGTAGATTTTTATTTTATATTTGTAAAAAAGCAAAACTACTTGGAAAACTTTCTTTGAAATCTTGTAAAATCAATGGTTATATGCTATTCTTAAAAATCAGGAATGGCTATTTTACTATG # Right flank : TATTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTCTTTTTGGGTTATTGACTTGTTAGTCTAAAGCTACACCATAAGAAAGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATATGGTGAATTGTATTACAAATAACGAAGGTTTTATCTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTTCTAAGTTGTATCATAACCTAAGTAAATTATAAGAATATATGGTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTATACGTAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 3 286538-287089 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 286538 30 100.0 36 .............................. AAAAAAAAGTAAAAAAAATGAAGAGGAAGAGTATTT 286604 30 100.0 35 .............................. AAAATTAAGTAGTAGGATGGAAAGATTCCTAGGAG 286669 30 100.0 35 .............................. GGCAAAACATTTAATGCTTGGGCATAAAATTCTTT 286734 30 100.0 36 .............................. AATTTCACATGAGCTATTAAAGGTTGATAATAAGCT 286800 30 96.7 35 .................G............ ATCTCAGAAGGTGTAAAATTATTACTTTCTGATAA 286865 30 96.7 35 .................G............ CTTTTCCCGGAAAGAAAAATCCAAGACATAGAATT 286930 30 86.7 34 ........TC......AG............ CCGAGTACTGGAACTTTATCTTCTAATTTAATAT 286994 30 90.0 36 ........T.......AG............ CAAACAATAATTCCATCAATTACATTATTATTTTTT 287060 30 86.7 0 ................AG..........GC | ========== ====== ====== ====== ============================== ==================================== ================== 9 30 95.2 35 GTTGAACAATAACATAGAATGTATTTAAAT # Left flank : TCAGCAAGAAAACAGATGAAGGATTTGTTTTAAATACAAATGGAGAAGAATCAATTATTAATGCTGATAGTGCTGTTGTAGCTATTGGATATTTATCTGAAAAAGACTTATATAGTGAAGTTAGATTTGATATTCCAAATGCAAGACTAATTGGAGATGCTAATAAAGTTCAAAACATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAATATTTAAATAAACTTTTGCAAAAAACTAGAATGGGTTTATATCCATATCTAGTTTTTTGTTTTTTACTTAAATTCTATAAGTATATGAGTGTTTGTCAGGCTATATTTTCCCAAACGAATTCAAATTTAAAGCTTATTCTAAGCATTGATATATAAGGATTAGAATAGGTTTTTATTATGAATTTTTAAAAAAGTAAAATCACTTGGAAAAATTTCTGTGAAATCTTGTAAGATCAATGGTTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : CAGGAAACCCAAATCTTTGATTTGGCATGAGTCGCTTACTCCTTCGAGAATGGGAGAAGGAGTTTCATTAATGAGCATAGTATATATTTTATATATAATTAAATTTCCCCAAGCGAATTCAAATTTAAAACCTATTCTAGCCATTGATATATAAGGATTAGGATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGAGAAAATTTCTATAAAACCTTGTAAAATCAATGCGTATATGTTATTCTTGAAAATAAGGAATGGCTATTTTACTATGGCTGAACCTTAACATAGGATGTATTTAAATGATATTATTGTTACATTCTTAAAAGGTTCATCTTTTGTTGAACCTTAACATGAGATGTATTTAAATTAATTAACTGTTTTATCTGGTGTATATGTGTTCCCGTTGAACCTTAACATGAGATGTATTTAAATTGGCAAAATGTTTTGAGAGTTGCCTGTCCTGGAATAAGTTGAACCTTAACATGAGATG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAGAATGTATTTAAAT # Alternate repeat : GTTGAACAATAACATAGGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 4 287370-287909 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================================================================================== ================== 287370 30 90.0 36 .C.............AG............. GATATTATTGTTACATTCTTAAAAGGTTCATCTTTT 287436 30 100.0 35 .............................. TAATTAACTGTTTTATCTGGTGTATATGTGTTCCC 287501 30 100.0 37 .............................. TGGCAAAATGTTTTGAGAGTTGCCTGTCCTGGAATAA 287568 30 100.0 36 .............................. ATATCTATATAATTAAAATCAGCAAATTCCTTTCTC 287634 30 90.0 36 .......AG......A.............. GAATCTATAGTAGTTTCATTTGTTAAACCAGACGAA 287700 30 90.0 115 .......A....................GC AGAGAACCCAAATCTACGATTTGGTGTGAGTCGCTTACTCATTCGAGGTGAGGAGAATGAGTTTCATAAAACAATCAAAGCTTTATTATTTTAAAATTAAATATGCTTTTAAATC 287845 30 86.7 3 T................A........T.C. ATG GC [287865] Deletion [287880] 287880 30 80.0 0 .......AA......A..........G.GC | ========== ====== ====== ====== ============================== =================================================================================================================== ================== 8 30 92.1 43 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ACAATAACATAGGATGTATTTAAATCTTTTCCCGGAAAGAAAAATCCAAGACATAGAATTGTTGAACATCAACATAAGATGTATTTAAATCCGAGTACTGGAACTTTATCTTCTAATTTAATATGTTGAACATTAACATAAGATGTATTTAAATCAAACAATAATTCCATCAATTACATTATTATTTTTTGTTGAACAATAACATAAGATGTATTTAAGCAGGAAACCCAAATCTTTGATTTGGCATGAGTCGCTTACTCCTTCGAGAATGGGAGAAGGAGTTTCATTAATGAGCATAGTATATATTTTATATATAATTAAATTTCCCCAAGCGAATTCAAATTTAAAACCTATTCTAGCCATTGATATATAAGGATTAGGATAGGTTTTTATTATGTATTTATGAAAAATAAGAATCGGTTGAGAAAATTTCTATAAAACCTTGTAAAATCAATGCGTATATGTTATTCTTGAAAATAAGGAATGGCTATTTTACTATG # Right flank : CATAGAACCCCAATCTGTGATTTAGGGTGAATCTCTTACTCATTGAGATATGGAGAATCAGTTTCATAAAACAAGTGAATCTGAGTAGATTTTTATTGACTAAAGTATTTTTGAAATTTAGTTTTAAGTTTAGGTTGTATTTTAGAGTGCTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTTCTTTTAATGGGGGCTATATAAATTGCTAGATACTAATTATTTAAAAATTTATTTAATGAATCATTGTCTTTAAATAAGTTTTCTAAGTTCCCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTGGCTACATTAAATTTAATAATTTCAGCGTTTGGTATAAGAGATAATAATACCACTGAATTCTTTTCTAAAAGCTTGTTAGCTTTTTTGTCACTCCAAAATTTATTATAATTTTCTTCACCTAAATTTTCATTTGCTTTATAGTTAACAGTTATTTCATATGG # Questionable array : NO Score: 4.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-1.53, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 5 293289-293976 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 293289 30 100.0 35 .............................. GTGTTTAATCCTATTGTATCAAGCCCCGCATCTTT 293354 30 100.0 34 .............................. CTGTTAAATTATTTAAATAATTTCCTCCAAAGTC 293418 30 100.0 36 .............................. ATTCACCCCTTCAAAGTTCACCATAATTTCAGTTTT 293484 30 100.0 35 .............................. GAGGTTCAAATCCTTTTATCTCCAAAGGAATTCCG 293549 30 100.0 36 .............................. TTGGTACAATTATAAAGAGTTGAAGATAAACTATGA 293615 30 100.0 37 .............................. TAAATTTTAATAATATTTCCTTTTGAATCTCTTATAG 293682 30 100.0 35 .............................. TAAGGTTACAGAAGCTAATGATAGAATGGAATTAA 293747 30 100.0 36 .............................. GATGAATTATTATGGCATGGCGAGAGATATAAAATA 293813 30 100.0 36 .............................. AGAATTTGTAAAAGAAAAATTAAAAGCTCCTGCAAC 293879 30 100.0 38 .............................. TAAATTAGGCTATGAAATAAAACAAACAGTGGGAGAGT 293947 30 90.0 0 .......................C.G...A | ========== ====== ====== ====== ============================== ====================================== ================== 11 30 99.1 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : TATTTACAAATTAAAATTATTTATGCAATGGGGGAAAAAATGATTTTAACCATTGATTGTTTTAGATATATGTATTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAGGATATGGATAAAGAATATAGAAATCCATGGCATCATATAAAAGGAGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGCTTCATTTCATATCAATAATATAGTATTTAAGCAGGGAACCCAAATCTTAGATTTGGTGTAAGTCGCTTACTCCTTGGAGAGTAGGATAAAGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGCTATTGGTATATAAGGCTTAGAATAGGCTTGTTTTATGTATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AAAACAAATAACGATGAAAAGATAACAAATAATAATTAAGGTGGTTTTTCATTGACAAGGTTTTTCAACATTTTGAAATTGAAAAACTAACAGCAAATATTATACAGAAAACTATAGAGAATCAATTATAAGCAGTAAAATCTAATTTTATAGTTAGTTTTTTTATAGAATTTTATAGTTAAAAAATTAAACATATAAATATGTGTTTATTTTTTATATAAATTTGATATAATATAAATAAGAAAAGCTTAGTGTTGGAGCACTAAGCAATCCTTAGAACATTTATTTTGTTTTAGGGCTATTGGATGAATTTAATAATTAAATTTGAGAGATTAAAGCACTATTCTTGGTCGGATGGGTGCTTTTTCTCTTTGCCATTAAGTTCTATGTGAATACCAAGAAATTTAATCTTGATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 6 294888-295635 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 294888 30 100.0 35 .............................. TGATATAATGTTGACTAATTCATGATATTATGATA 294953 30 100.0 36 .............................. ATTTTATGGAGGTTATCAAAAGTGAGTTGGGAGGAC 295019 30 100.0 35 .............................. AGGTATAGAAAAAATAAAGAAAACAACAGAGGAAA 295084 30 100.0 36 .............................. TTAAACAGTTTTTTAGCCTCTTTGACTGTGATTGTA 295150 30 100.0 35 .............................. AAAAATTTTAAATATGATGATTCTTCATCTTGTAT 295215 30 100.0 36 .............................. GATATTTCTTTTATAGATTTAGAAAAAACTTTAGCT 295281 30 100.0 34 .............................. AAGTTAAAGTGACACAAAAAACCTGTGATGAGGG 295345 30 100.0 36 .............................. TCCTTAGAAAGTTCACACACATAACTTGTATACCAT 295411 30 96.7 35 A............................. GAAAGAACTAGAGCTAGTATTTTATATGAATTATC 295476 30 96.7 35 A............................. TGATGTGGAAGAACTTTAATCCTTTGGACGAATTC 295541 30 93.3 35 A............................T GAAGAAACTATAAAAACATTAAGCATTATAAAAGC 295606 30 83.3 0 ...............G....AG......GT | ========== ====== ====== ====== ============================== ==================================== ================== 12 30 97.5 35 GTTGAACAATAACATAAGATGTATTTAAAC # Left flank : GATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAACCAACTTTAGCTTACAAACCTATATTAGCTCTTGAAATATAAAGCTTAAGGTAGGCTTTTCTTATATATTTATAAAATATTATAATCGGTTGGAAAATTTTCTTTAAAACCTTGTAAAACCAATGTCTATGTGCTATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : TAGAGGAACCAAATTTGTTATTTGACGTAAATTGCTCACTTTTTGGAGAGTATGGGAAGGTGTTTCATTAATTGAATTTTTCCAGGCACAATAAATTTTAAAACCTATTTTAGTTATTGAGATATAAAGCGTAGGATAGGTTTTTACTATGTATTTATGTAAAACCAAAATCGCTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAGTGTTTATATGATATTCTTGAAATTAAGAAATGGCTATTTTACTATGGTTGAACAGTAACATGAGATGTATTTAAATTGGCATAACAATACAAAAAGAAATAAAAGTAAAAGGTTGAACAGTAACATGAGATGTATTTAAATTGTTTCGGAGATTGGCTTCTATAAAACTTATCTACGTTGAACAGTAACATGAGATGTATTTAAATGGGATTTCCTCATTAAAACATCTTCATTTGGAAGGTGTTGAACAGTAACATGAGATGTATTTAAATTTGCCTAGATTATTTAACAT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 7 295889-296245 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 295889 30 100.0 35 .............................. TGGCATAACAATACAAAAAGAAATAAAAGTAAAAG 295954 30 100.0 35 .............................. TGTTTCGGAGATTGGCTTCTATAAAACTTATCTAC 296019 30 100.0 36 .............................. GGGATTTCCTCATTAAAACATCTTCATTTGGAAGGT 296085 30 100.0 37 .............................. TTGCCTAGATTATTTAACATTGTGCTTGAAGAAAATT 296152 30 96.7 35 ........A..................... GTGGTAGTAAGTACATTACTCTTTGAGAAAAAATC 296217 29 90.0 0 ........T......A.......-...... | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 97.8 36 GTTGAACAGTAACATGAGATGTATTTAAAT # Left flank : ACACACATAACTTGTATACCATATTGAACAATAACATAAGATGTATTTAAACGAAAGAACTAGAGCTAGTATTTTATATGAATTATCATTGAACAATAACATAAGATGTATTTAAACTGATGTGGAAGAACTTTAATCCTTTGGACGAATTCATTGAACAATAACATAAGATGTATTTAAATGAAGAAACTATAAAAACATTAAGCATTATAAAAGCGTTGAACAATAACATGAGATAGATTTAAGTAGAGGAACCAAATTTGTTATTTGACGTAAATTGCTCACTTTTTGGAGAGTATGGGAAGGTGTTTCATTAATTGAATTTTTCCAGGCACAATAAATTTTAAAACCTATTTTAGTTATTGAGATATAAAGCGTAGGATAGGTTTTTACTATGTATTTATGTAAAACCAAAATCGCTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAGTGTTTATATGATATTCTTGAAATTAAGAAATGGCTATTTTACTATG # Right flank : TTGGGATATGATTTTTACATTAATTAAATAATAATCGTAGTTTATTATAAATAGTATGGAGGTAGATTTTGAAACTTAAAGTAGTATTTTTAATTAGTTTTATTATGTTTATTCTTGGTATATACTTTTCCAATAAGTCTAATTTTATGATTTTAATTGGAATATTAGGTGGAGGAATAATGGGATGTGTATCAGCATTTGTAGGGTATTCTAGAACAAATGCTATTAAAGATAAAGAGGCTAGTTCATAAAAGAATTAATTTTTTATTATCTCATGGATTAAGTATGTGTTAAAGTTTTCAATATTAACATAAGAATTAAAAATTAATATTATATATGATAAAAATTACTAGAAGTCTTAGAAAAATCTAAGGCTTTTATTTTATGCAAAGATTTAGAATGGAATATGATAGGTAATTAATTTATTAATAAAAATAATAATATTTTTAAAATATAAGTAAAATAATTAGTTATATTAACTAAAAGGTGTATGGTATAAT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 8 306997-307883 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 306997 30 100.0 34 .............................. GACATATTAGTTAAAGTACGACTGCCAGTTGCAA 307061 30 100.0 35 .............................. GATGCTACGCAGGTAGTAAGTAAAGATGGCTTTGG 307126 30 100.0 36 .............................. TATGTATTGCATACTAAGTCAATAATTTGATTTTCT 307192 30 100.0 36 .............................. TTAGATTATCTCTTATCAAATCCTCCACTTTAGCGA 307258 30 100.0 37 .............................. GATGCTTGGAAAATTAAGAACATAGGTTTATCATCCC 307325 30 100.0 36 .............................. TCATATAAATATTCTCTTTTTAAATCTGTACTAAGT 307391 30 100.0 34 .............................. GAAGTTTATGAAGTTGATCCTATAAGAATACAAC 307455 30 100.0 34 .............................. CTCTTTCACCTATTGGTGTTTGACCATTTTTCTT 307519 30 100.0 37 .............................. AAAGTATTTTTAACTGTATTACCTAAAATGTTATTTA 307586 30 100.0 36 .............................. CAATATTTGCATTTACATTTTTTACATTCTTCTTTA 307652 30 100.0 36 .............................. TCCTCAAATAAGAAAGTGGTACCAAGGCTTTAATAT 307718 30 100.0 34 .............................. TATTTTTCTTTAAAAGATTTATGCATTATTCTAT 307782 30 96.7 38 A............................. TCTATAGAAGAACCAGCAGATTTGGCAATAGGTGTTAA 307850 30 90.0 0 ......T........G......G....... | G,AG,T [307869,307875,307879] ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.0 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : TATTTTGAATTTATTATTGTTGACTAAAGGAATAGTAAATTATTTCAACAGAGCAACAGGATAATCTTTTTAACAAATACCTATACAAAGTATTGTTCTATGGAAATGCATATGAAAACTATTATTGCATAATTTGGTGGGGAAGAAAATAATTATAAATTGATAGAAGAAAGAGAAGCAATGTATCAATTAGAAACCTTAAAGAGGGATAAATATTACATGAAGTTAACAGATGATATTTAAAAAAGTTCTTGTTTAGGTATATAAGCAATTTTCACTTTAAGCATAATAAGCTCTACTTGTTTTTTAAATATTAATTTGAATTTTTCCAAGTGAATTTAATTTTAAAATCTATTCTAGCTATTGACATTGAAGGCTTATAGTAGGTTTTTATTATGAATTTTTAAAAAACAAAATCACTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAATGCCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTCCTATG # Right flank : TATTGTAGACACAGAAAGCTGATCACATTACAGTATAAATAAAAGAAGGATGTGTTAGAAATGGTAAGAGGTCAAAAACAATATACGGAGGAATTAGAAAATAAATAATACAAAAATTAAATGTTTAATAGTTTTTATTCTATGGAAAGAGATGGATTCTATAAAAAAATAGATTGTATGTTTTTAGGATTAGAGAATTAAGTGAAGAATTTATATAAATTAAATGATCAAATTTCTTTTCATACAAGAAAAGCTTTAACCTATTTGAAATTTATAAGTTATGAGGGGGTTTAATATGACATTACCTAAAATAACCCAAGAGAATGTGAACATATTTATTCCACTTAAGGCATCAAAAATATCATATAGATTTGCTAAGGAACATCATATATCTCAAAAGCAAGCTTTATTGGAGTCCTATAATTCAAAAACCGATGAAGCTTTGGAAAGAGAATAAACTAAATTATGGTATGAAGGTATCAATTATTTATATGAAGAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 9 308652-309470 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 308652 30 100.0 36 .............................. GCCAATTGTGAAGCTGTATCCTCTTTGAATTTATTA 308718 30 100.0 36 .............................. CAAGCTAATTTTTGCAAACATTCTTTACAAATTGGA 308784 30 100.0 34 .............................. AGTCGTGCCAGTTCCTTAGAAACTTTGTTTTGAC 308848 30 100.0 36 .............................. GTAAAACCAACCCCAACACCTTGGGCCATGTATTTA 308914 30 100.0 36 .............................. CGATTTTTTGTTTTTATGCCAAAAATTCAGTGGAAT 308980 30 100.0 36 .............................. TTAAGATTTACTTTGTTTCTTCTATTAACGAAAACT 309046 30 100.0 35 .............................. TAAAATTTTTCTTCTTGATTAATCTTTTCTCCATC 309111 30 100.0 36 .............................. CCTTTAGTCACCTTTGGAATTATGTTGTTAGCAAAC 309177 30 100.0 37 .............................. TTGTTTATTGTTGAGTATCCGGTGCTAGTTTGCTTAG 309244 30 100.0 36 .............................. AACAATATCAAATATCTATATTTTAAAATATCCCAC 309310 30 100.0 36 .............................. CCAACTATTATTACCTCTTTAACTTGTAATCTTTTT 309376 30 93.3 35 ...............AG............. TCTACTTTTCCTTTAAACCCTAAATCTAAAGTACC 309441 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.2 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATTTATAAGTTATGAGGGGGTTTAATATGACATTACCTAAAATAACCCAAGAGAATGTGAACATATTTATTCCACTTAAGGCATCAAAAATATCATATAGATTTGCTAAGGAACATCATATATCTCAAAAGCAAGCTTTATTGGAGTCCTATAATTCAAAAACCGATGAAGCTTTGGAAAGAGAATAAACTAAATTATGGTATGAAGGTATCAATTATTTATATGAAGAATTAGAAGAAGAGAAAGATTTAAAAAAGTAACGAAATTTTTTACACCTAAATCTATCATATTTAATATACTACACCTAATTATGCGTAAAATATTTTTCCAACCAATTTCAATTTTAAAACCTATCTTAGGCATTGAAATATAAGGCTTAAGATAGATTTTTGTTATGTATTTATGAAAAGTGGGAAACGGCTGGAAAATTTTCTGCAAAACCTTGTAAAATCAATAGGTATATGATATTCTTTAAAATAAGGAATGGCTATTTTGCTATG # Right flank : CTTAAATGAGTATGAAAAATTAAGTATAATTTAACCACAACATATGATGTAAAATCATTATAAAGATTATAATCTTTATAATGATTTTTTAATATTAAAAAAAATAATATATAATATTATAATCATATGGAGAATGTTGATTAAATATAAATAATGTGGTAATATAGAATAAAAATTTAGAATATTGTTAATATTCAATAAAAATACAATTGAAGACTGGAGGTGAAATAATGGAAGTATATGAATTAACACTAAAAATATTTCTCCTCAAAGATTTAACAGTGGACAAGTCTTATGAAAAATTAACAGAATTAATTGACAAATCTTTATGTAAAGATGATGAATTATTAGCTTTACATAATGAAAATAAGTATAAATACTATACTTTTTCATTACCTTATAAATTGGAAAAAGACAAAGTATATAAAGCTGGAAATATATATTCAGTAAAAATAAGAACTATTGATGAGAAAATATTAAAGAATTTCAAAACTCAGCTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 10 319008-319432 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 319008 30 100.0 36 .............................. ATCTTCTTATAATTGAAATATTCTTATCTGCCATTT 319074 30 100.0 37 .............................. TAAATTACAACCCCGTCAGTTTCATTTAAAGGGTTAC 319141 30 100.0 36 .............................. AATTAAGAAAAAATAATATAGTTGCCAGGGAGTTAT 319207 30 100.0 35 .............................. ACGTGATGCAGATGCATATGAGATAGCATTAGCAG 319272 30 100.0 36 .............................. TCTTTAATTAAGTCAAACCCATTATTTAAATCATAA 319338 30 100.0 35 .............................. TATAGTTCATAAATATTATTTGTATCATATGTATC 319403 30 83.3 0 A.....C.T...................GC | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.6 36 GTTGAATAGTAACATGAGATGTATTTAAAT # Left flank : TAAAGGAGAAGATGTAGATGGGAAAAGGATTTAATTATAATTATGCTTTTGTTTTTTATGATGTTAATGAAAAAAGAGTAAACAGAGTATTTAAAGTTTGCAAAAAATATTTATCTCATTTCCAAAAATCTGTATTTAGAGGAGAAATAACACCAGCAAACTTAATATTATTAAAAAGGGACTTAAATAAAGAAATAGATGAATGTGAAGATTTTATATGTATTATAAAGCTAATGAATAATAATGTATACGGAGAAGAAATATTAGGGAATAAAGCAATGACAACAGGAGAAGATTTAATATTATAAAAAAATGGAATCAATTTTTCCAACCAATTTTAATTTTAAAACCTATCTTAGGCATTAAAATATAAGGCTTAAGATAGGTTTTTATTATGACTTTATGAAAAGTGGGAATTGCCTGGAAAATTTTCTGTAAAAGCTTGTAAAATCAATACTTCTATGGTATTCTTGGTTTTAAGGAATGGCTATTTCCCTATG # Right flank : CAGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACTTATTCTAGCCATTGATATATAAGGCTTAGGATAGGTTTTTGTTTTATATTTATAAAAAAGTAAAATCACTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAAAGGCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATGGTTGAACAGTAACATAAGATGTATTTAAATTGAAAAAGGTGGTTATAAGTTTACTAATAGGATTAGGTTGAACAGTAACATAAGATGTATTTAAATTATACAAAAACAAACTGGATTGATGGATTTACTCCGTTGAACAGTAACATAAGATGTATTTAAATTATATATATAATTGAATTTCGATGTTTTTCTAGTTGTTGAACAGTAACATAAGATGTATTTAAATTTTTTTATAAGTTGTGGTGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 11 319686-320498 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 319686 30 100.0 36 .............................. TGAAAAAGGTGGTTATAAGTTTACTAATAGGATTAG 319752 30 100.0 35 .............................. TATACAAAAACAAACTGGATTGATGGATTTACTCC 319817 30 100.0 35 .............................. TATATATATAATTGAATTTCGATGTTTTTCTAGTT 319882 30 100.0 36 .............................. TTTTTTATAAGTTGTGGTGGTACATTAAAAGCTATA 319948 30 100.0 36 .............................. ATGATTATCACTAAGGAGAGTGAAAAATGAAAGTTG 320014 30 100.0 35 .............................. TTGTCAGTAATATATACAGTCTTGTCCCATGCAGG 320079 30 100.0 35 .............................. GTAATAATATATTTTTTTAATTTTAAAACTTCCTC 320144 30 100.0 36 .............................. GGAATTTCATTTAATATAGCTGTGTTATGTACTATT 320210 30 100.0 34 .............................. TCATAAATAAATCGACCATCATTTATAATTTTCT 320274 30 100.0 36 .............................. TTATTACAATATTCAGGTATAACAACTGTAAAATTG 320340 30 100.0 34 .............................. TATTTTAAATATTAAATAAATAGAGGTGATTTTA 320404 30 100.0 35 .............................. GATGAAACCATAGTAGCTAATCATCCATGGGCCAC 320469 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 99.5 35 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : ATATAGTTGCCAGGGAGTTATGTTGAATAGTAACATGAGATGTATTTAAATACGTGATGCAGATGCATATGAGATAGCATTAGCAGGTTGAATAGTAACATGAGATGTATTTAAATTCTTTAATTAAGTCAAACCCATTATTTAAATCATAAGTTGAATAGTAACATGAGATGTATTTAAATTATAGTTCATAAATATTATTTGTATCATATGTATCATTGAACATTAACATGAGATGTATTTAAGCAGAGAACCCAAATCTGTGATTTGGCGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACTTATTCTAGCCATTGATATATAAGGCTTAGGATAGGTTTTTGTTTTATATTTATAAAAAAGTAAAATCACTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAAAGGCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGAGTTTCATTAATTGAATTTTTCTAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAGAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATTCATCTGTTATATCTATACCTAGAATTTTTATAAAAGTTGAACCTTAACATAGGATGTATTTAAATTTGTGAATGTATAGGGAAAAATGACCAAATGTTAGTGTTGAACATTAACATAGGATGCATTTAAGCAGAGAACCCAAATCTATGATTTGGTGTGAATCGCTTACTCCTTAGAGAGTGGCATAAGGATTTTTATAAAACTAAACTATGCATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 12 320751-320913 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRAB01000002.1 Clostridium botulinum strain ATCC 17841 ATCC17841_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 320751 31 100.0 35 ............................... CATCTGTTATATCTATACCTAGAATTTTTATAAAA 320817 31 100.0 35 ............................... TGTGAATGTATAGGGAAAAATGACCAAATGTTAGT 320883 31 83.9 0 .......A.............C......GCA | ========== ====== ====== ====== =============================== =================================== ================== 3 31 94.6 36 GTTGAACCTTAACATAGGATGTATTTAAATT # Left flank : TCGACCATCATTTATAATTTTCTGTTGAACAGTAACATAAGATGTATTTAAATTTATTACAATATTCAGGTATAACAACTGTAAAATTGGTTGAACAGTAACATAAGATGTATTTAAATTATTTTAAATATTAAATAAATAGAGGTGATTTTAGTTGAACAGTAACATAAGATGTATTTAAATGATGAAACCATAGTAGCTAATCATCCATGGGCCACGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGAGTTTCATTAATTGAATTTTTCTAGGTACAATAAATTTGCAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAGAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATAGCTATTTTGCTATG # Right flank : AGAGAACCCAAATCTATGATTTGGTGTGAATCGCTTACTCCTTAGAGAGTGGCATAAGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACCAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTAGGAATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAAGCATAGATAAATTTAATTTTAAAAACCTGTCTATTTTTAGGACAGGTTTTTAGTATCTAAAGGAAATAGATAGAATAGTTTTTTGTAGTCATGTAAATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAATTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAA # Questionable array : NO Score: 5.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.19%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //