Array 1 349512-350538 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PXYK01000001.1 Mesorhizobium ephedrae strain 6GN-30 ZB100000, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	================================	=====================================	==================
    349512	    32	 100.0	    36	................................	CGGCGCAGCACCGGGAATTCCCAAGGCCGATCCATC 	
    349580	    32	 100.0	    34	................................	TACGCCAATCTGCACAAGCCGGGACTGGCTGCGG   	
    349646	    32	 100.0	    33	................................	ACTTCGTGTGCCGCCGCGGCGCAGGCGCGCATG    	
    349711	    32	 100.0	    35	................................	CTCTACGAGGGAACATGGAGGGTCACCGCGCTAGG  	
    349778	    31	  96.9	    34	....-...........................	CTTGGCGATCGCCTTCGCGTCGGCGAGGCCGAGT   	
    349843	    31	  96.9	    34	..............-.................	TTCGGCGGCGGCGCAGGCTGGCGGCGCACGCGGG   	
    349908	    32	  96.9	    34	................A...............	TCGCGGGACAACATCACCATCGCCGCCGAGCAGG   	
    349974	    32	 100.0	    34	................................	TACGGCAAGGCGCCGGACGCCTGGGAGCATCTCA   	
    350040	    32	 100.0	    36	................................	CGTAGGCGTCGAAGGGGAAGAAGACGTGATCGCGGC 	
    350108	    32	 100.0	    34	................................	TGGCGAACGGGCAGGATGTCCCCGAGGAGCTACT   	
    350174	    32	 100.0	    35	................................	TTCGGCGGCGGCGCAGGCTGGCGGCGCACGCGGGC  	
    350241	    32	 100.0	    34	................................	CAAACCGTCGAGATGCCGGTGTGGTGGGGGCTGC   	
    350307	    32	 100.0	    34	................................	TGGAAGGTCGTCGAGGCGGTGGACCTCGAAAGCA   	
    350373	    32	 100.0	    34	................................	TGGCGAACGGGCAGGATGTCCCCGAGGAGCTACT   	
    350439	    31	  93.8	    37	....................C...-.......	TTGCGGACGATCTCGGCGATCTCGTAGTCGTCGAGAT	
    350507	    32	  93.8	     0	...........T............G.......	|                                    	
==========	======	======	======	================================	=====================================	==================
        16	    32	  98.6	    35	GTCGCCCCTCGCGCGGGGGCGTGGATCGAAAC	                                     	       

# Left flank :   TGCTCGTCACCTACGATGTCGCCACCACCGAGAAGAAGGGCACCGCCCGGCTGCGCGCGGTGGCCAAGGCCTGCCGCGACTTCGGCCAGCGCGTGCAGTATTCGGTTTTCGAGATCGAGGTCGACCCTGCCCAGTGGACCCGGCTCAAGGCCCGTCTGGAAGCCATCATCGATCCGGAGTTCGACAGCCTGCGCTACTACCATCTGGGCTCGAACTGGCAGCGCAAGGTGGAGCACGTCGGCGCCAAGCCCGCCGCCGATCTCGGCGGCACGCTGATCGTGTGAGCCTGCGGCGCGGGCAAGCACGGCCCTCGGCCGAACCGGCGCGAACCCGCAGCGTGCCGGCGAGGTCCGGGCGGTTCGCGCCCGCGCCTGGTCCTTGAAATCGTGAGGAAAATTTTGGGTGGCGACCGATCGAACGACGATCGCGTCCGCATTGACGGTCGCTTCGCGGTATCAACCCCTTTTGTCGAGGCTTGGGAATGGGTTACATGGCCCACA
# Right flank :  CCTTGCCGAATTCGGCGGGGCGGAGCTCTATCTGGATCGCCCCTCGGGGCGTGGATCGAAACGCCGATCCGGCGCTCGGCGGCGGCATGGCAAGGTCGCCCCTCACCAGCACTGCCCGGAACAAATAGCACTCGAGAGTGACCGCCTCGAAGCACGAGAGCAGTATCGACCCGGCAGCAGACCGAAGTGATATAAGTGTCTGAATCGGAACGAGCGGCGTTGTTTCAGACCCTTGCGAGCCGTCGGGTGAGCATTCGGATGTTTGCGATGAAGACCCAAGCCTGTGCGGATTCGATGGACCGCTCGAAGTCCTTGGCCAGTCTCCGGCATCTGCCCAGCCATGCGAAGGTTCGCTCGACAACCCATCGGCGCGGCAGGACTTCGAAGCCCTTGGCGGTGTCCGACCGCTTGACGATCTCCATCGTGAACTTTCCGATCTTTTGCAGGGCGCCCCGCAGTTTCGGCCCTGCATAGCCGCCATCGACGAAGACGTGGCGCAG

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCTCGCGCGGGGGCGTGGATCGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.50,-5.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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