Array 1 1076-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLIS01000012.1 Streptococcus canis strain FU1 ScFU1_contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1075 36 100.0 30 .................................... AAGGGATGACTAAGGAAATTAGATTACGAA 1009 36 100.0 30 .................................... ACAATCTTACAGATATTTCGGGAAGTATTC 943 36 100.0 30 .................................... TAGTTAGATAATTTGAAGAACAAAATAAAT 877 36 100.0 30 .................................... TACCTAAAGCGCCTGAGACCACGCCGAGTT 811 36 100.0 30 .................................... AAGTGGATAAGCCAATGTATATCCTTGGTG 745 36 100.0 29 .................................... AGCAAACCAGTTGAGAGACTAGCGCTCAA 680 36 100.0 30 .................................... TGTTGGTAGTAAGGGTAGGAGCTAAGCCGT 614 36 97.2 30 .............................T...... TTTTGTATCAAATTCTAGGCCAGATGTGCA 548 36 100.0 30 .................................... CCTTGAATAATAGCAGATGGCCGATAATCC 482 36 100.0 30 .................................... AATGCGGACAACGAAATTGTCGGGGCTTAT 416 36 100.0 31 .................................... CTATGGGTGCATCTCTAAAGCAATCGCTTGG 349 36 100.0 30 .................................... AGAAGCAATTGTCATGAACTCTAAGACATT 283 36 100.0 31 .................................... CTCTGACACTCTGCCTAATATACTGTTTAGC 216 36 100.0 30 .................................... AAAAGTCTTATAAAATAGACCATTTTATAA 150 36 100.0 30 .................................... CTCTGGTTCAATATGCATTAGTCACTCACT 84 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 99.8 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCAGGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGTGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CTTGACAAAATCACGGTTACCAATATGTTCGCCAAATTTCAAGTGTAAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 21358-22118 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLIS01000011.1 Streptococcus canis strain FU1 ScFU1_contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21358 36 100.0 30 .................................... TAATTTTGCTCATTTTTATCTCCCTTTTCT 21424 36 100.0 30 .................................... CAAATGTTTCTACCATTATGGTATCATACA 21490 36 100.0 30 .................................... CTGTATCAAGCGGAAGGCTAGACGTCTTTA 21556 36 100.0 30 .................................... CTTGATTGATGTGCAACAGGTCAAACCACT 21622 36 100.0 30 .................................... GAAACCTGATGACAATGTTGAGCACAAGAT 21688 36 100.0 30 .................................... AACGGCACCAGCGTTAATCAAATAACTTTT 21754 36 100.0 30 .................................... TATAATTACTTCTTTAAAACCATTCATCAT 21820 36 100.0 29 .................................... CGCTTCTTCAATGTTCATCTCAATCCTCC 21885 36 100.0 30 .................................... ATTTCTTTTAGTTTTGGATGGCTCTCAACT 21951 36 100.0 30 .................................... ATAGGTGTTGTTAGGTCCTGTATTGCGCTT 22017 36 100.0 30 .................................... CTTTCGTATTCCGCCTCAAGTCTCCCCTTA 22083 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCCACAATAACGGAATTGATTGCTTATGAATGCTTAGAAAATGAGTTGGATTTAGAATACGATGAGATCACCATTTTGGAACTGATAAAAGCTCTGGGAGTCAAGGTTGAAACACAAAGTGATACTATCTTTGAAAAGTGTCTTGAAATTTTACAAGTTTTCAAATACCTTTCAAAAAAGAAACTTTTAATTTTTATTAATTGTGGTTCTTACCTTACAAAAGAAGAATTATTGAAGATAAGAGAATATATTGACTTGTCTCAGCAAACAGTTCTTTTTATAGAACCAAGAAAGTTATACAATATTCCCCAATATATTTTAGATGAAGATTATTTTTTGATAAAAGAACATACAACTTAGACTACATTCGTAAATGTTGATTTTATAGGTTTTTTGGCGTATAATATAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CAGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTCAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 19203-16918 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLIS01000010.1 Streptococcus canis strain FU1 ScFU1_contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 19202 32 100.0 34 ................................ AACATTTCTAAATGAATAACTTACACCCTGTTTC 19136 32 100.0 33 ................................ ATCTGATTACCAACAGATGTGATAACAGACAAA 19071 32 100.0 33 ................................ ATCTTGTGGCTTGCTAAAGTCAAGGAGCAATTC 19006 32 100.0 35 ................................ AATGTTTCAAGTTGTGCCTCTGTGTTTTGCAATTG 18939 32 100.0 37 ................................ TAAATTTCCCAATCTGTACAGATGCGGTAAAGATACC 18870 32 100.0 34 ................................ TATGACTTTGACAAGCTAACGACTGGGCTTCATG 18804 32 100.0 35 ................................ TTGTACCCATTTTAACAGAAATTGAGGTATAAAAC 18737 32 100.0 37 ................................ AATAGAGAAAAAACTATACGAGTACAAAGTTTATGAG 18668 32 100.0 34 ................................ CAATCAACAGCACCGCTTTTAACTTGATTAATCG 18602 32 100.0 33 ................................ GTTAAGCGTCTCTCTAGCAACTTTATCCCATTT 18537 32 100.0 36 ................................ CCTGATGAACTCGGTAATATGTACACCGATATTGAC 18469 32 100.0 34 ................................ GTTCGCTAACTGGACGACCCTGTTTTGTAGCTTG 18403 32 100.0 35 ................................ TTTGATACAAAGTAAAATAGAAGAAAGAAAGATGT 18336 32 100.0 35 ................................ ATGGAAGACTTGCCAAAAAAGGAGCATCAGTTGTT 18269 32 100.0 35 ................................ TCATCTTACTCCTTGATTTGTGACACATTCATCAG 18202 32 100.0 34 ................................ AAAAATATCAGGTTTACATGGATAAAATTCACCA 18136 32 100.0 34 ................................ CACATCAAAACCAACAGATGATGAATTAGAAAGC 18070 32 100.0 34 ................................ AAATTATTGATGCTTTGCAAGAAGCATAAGGAGG 18004 32 100.0 33 ................................ AATTCGAGAAATTGATACTCTAGCTCGTTTATC 17939 32 100.0 34 ................................ ATCTATGATGAAAAATATAAAACGTTGAGCAACA 17873 32 100.0 34 ................................ ACTACTCCGCGCTGGAATATTGTCCATCTTCAAG 17807 32 100.0 34 ................................ ATATCAGACCATTGTGGAGACTTAACGAGCGACC 17741 32 100.0 34 ................................ TAGTTGTTTGATTAAATCCTCTGGCATATTTTTC 17675 32 100.0 33 ................................ TTTTTCGGATACCTTTTTGTCGAAGTTGAGGTC 17610 32 100.0 34 ................................ ATACGAAAGGTTATCTAATGGTATTAGAAAAATG 17544 32 100.0 35 ................................ AATATAAGTTTGTCCAGTCTGTTTCTCACAGTGTC 17477 32 100.0 34 ................................ CTTAAGCTTGATTATATTATAACTCTGTGTTTCT 17411 32 96.9 34 ........T....................... AAAGAAATAATCATGAGCACGGCTATTGTTTTCT 17345 32 100.0 35 ................................ AACTTGTACGTATAAATCCTTGGCTTCGTTAGTTA 17278 32 100.0 34 ................................ TTCAAACTCTTCGGTTTCTACGTTACTATCTTCT 17212 32 96.9 34 ........T....................... CTGCAACATGCCACGGTTAGTCAACTTGATTTTT 17146 32 100.0 34 ................................ AAGAAAAAATGCGGAACAAGAATTTTGGAATAAA 17080 32 100.0 33 ................................ AACTTCTGCAACTCAGCAACACTTAAGCCATCG 17015 32 100.0 34 ................................ TCCAATGTAAATACCTTTGAGTCGGTTAGCTGGA 16949 32 81.2 0 .....................AC...A..CTC | ========== ====== ====== ====== ================================ ===================================== ================== 35 32 99.3 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCTGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGAGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGCCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGTC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //