Array 1 11145-8292 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMFT010000018.1 Vibrio cholerae strain Vc2932 NODE_18_length_39396_cov_110.391236, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 11144 31 100.0 35 ............................... CCAACCCAGTGACTTTAGCGGCGTTACTGCCGCAC 11078 31 100.0 34 ............................... CGTAAAGCCGCAGGCGTCAGGAGGAAGAGTTATC 11013 31 100.0 34 ............................... CTGGAACAGCAACGTGCTTACCTAGAGAAGAAAG 10948 31 100.0 36 ............................... CAAATGCCATTTATCGCCCCTTTAATTTGCGCCCAT 10881 31 100.0 35 ............................... CTGGAGTTTTCACTAGCAAAGTACCATTCGATTTG 10815 31 100.0 34 ............................... CACGGCCCGCTTCATCACTCCTAGAACACCTTTT 10750 31 100.0 34 ............................... CAGGTGCAACTTTATATCTGCTGATTGCAAATGA 10685 31 100.0 34 ............................... CGGAATTGAATTAACCCTTGTAGAGACTGCAATC 10620 31 100.0 34 ............................... CCTCTCCATGGAATGCATCGTAAGTTTGATTTGT 10555 31 100.0 34 ............................... CGAAGCTGAATGGATGGCATCGGTAAGAGTTGAA 10490 31 100.0 35 ............................... CGGTAATTACAACATTTATGTTGATGGGGTTACTT 10424 31 100.0 34 ............................... CTACGACCTGTACGGTCAGCTAGAGCAAGCAACT 10359 31 100.0 35 ............................... CATCGAAATAAAGGTAAGCGACTAAGGCTCGTTGT 10293 31 100.0 34 ............................... CTGAGGTGGTCGCGTTTTCCCCTCATTTGTTCAT 10228 31 100.0 34 ............................... CAGAAAAATATTTGCCACTCGTTGATTTGGCTCT 10163 31 100.0 36 ............................... CCAATTAGATGAGTGGGAAAAGGACGGAGTTAAGCA 10096 31 100.0 36 ............................... CAATGCGCGTCTCGTATATCACGCAAGACGCAAACC 10029 31 100.0 35 ............................... CAATCGAGACAAGAAGTTCACGCAGTCGGATATAG 9963 31 100.0 35 ............................... CATAAAAACCGCCGTGAATACTACAACTGCGAAGT 9897 31 100.0 36 ............................... CAGGCAGCAAACGCCCCTACTGTGTTTACCTCCCCC 9830 31 100.0 35 ............................... CAGGATTTGTCTGTTGTATTTTCATGAAATAAAAT 9764 31 100.0 34 ............................... CCTGCTTTATTCGCTAATGACAAGCGGAATACCA 9699 31 100.0 35 ............................... CAACAGACGGAAGACGTGCAAAGAAAGAGATCAAA 9633 31 100.0 35 ............................... CTCTGTGACAGGGGCTCAGTTTCAGCAATTACGCA 9567 31 100.0 35 ............................... CATTCAAAGACGAATCCGTAGAGCTTGAAGTTAAA 9501 31 100.0 34 ............................... CTAGCAAGGCGAGGTTGGCGCAATTGAACGCTGT 9436 31 100.0 34 ............................... CTATGAAGTCGAGCGATTTCAAGAAGAACGAAAA 9371 31 100.0 34 ............................... CGGTCGAAGTCTACATCAAGCAGAATGAAGGCGT 9306 31 100.0 34 ............................... CGCAGTTTCCAGACCGTGACACTCAAGCTGCAAT 9241 31 100.0 34 ............................... CCAAGCGTCTGAAAGTTTCATCATTGTTGTTATC 9176 31 93.5 36 ....T..............T........... CGATGTAGTCTATTAAAAGCACGATGCACCCCATTT 9109 31 100.0 34 ............................... CTTGTTTCGATAAAAGCTCAAGTCGATTATCGCT 9044 31 100.0 34 ............................... CATTACTTTCGGTTTGCGTGGTGAGGTCGCCGAA 8979 31 100.0 35 ............................... TACTCTCTATTAAAAATAAAAGCGTCGCCACCGTG 8913 31 100.0 35 ............................... TTAGGTTTCCGATAAGCTCGCGCATTACCAGAAAA 8847 31 96.8 36 .............T................. TTGATTTTGACATTGATACGCCGCCCGCCAATCTCA 8780 31 100.0 35 ............................... TAAAGTCACCCGTTTTCCCCAGCAGCTCATCCACG 8714 31 100.0 34 ............................... TTGCAATGCTTTCAGAAATGTTAAAGAGCCAACT 8649 31 100.0 35 ............................... TAAGAGTCTGCAGAGCGCGAGCAGAAAGTCGAAAG 8583 31 100.0 35 ............................... TCCTGACGTCTCAACCATTTGGGACAACGTAAAGG 8517 31 100.0 34 ............................... TATGGTCACTTAAGCTCAAATGACATTAGCTCAA 8452 31 100.0 34 ............................... TTAACCGCTGCAACATACGCAGCGAAACGCCAGC 8387 31 100.0 34 ............................... CTCTACGCTCACGATGATGCGGTAGACCAGCTCA 8322 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 44 31 99.8 35 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAA # Left flank : CCATTTGTGATCAAAAAATAAGGAGCGAGCCATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGAAGATGGTCAAAATCGCCTCAGACAATTAGCTAAGGTGTGTTTAGATAATGGAGTAAGGGTGCAGTATTCTGTATTTGAATGCGAAATAGATGCCGCGCAATGGCTGCGCTTTAAAAATAAGCTGCTGTCAATTTACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTTGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGATGCCATAGATATATTCAGAGATACCCTAATTTTATAGTCGCTAGGCTTGAGTCCTCAGTAAAACACTGGGGATCTAGCGATTGTGTAAGCTCTTTAAAAATATAGGAAATAATTAATTATATAGATTCACACAAAGTAGTTTTGTGCTACCGCGCAAAGTTAGCGGTAACTAATAGAGTGTGTTAGTTTGTACGTTCCTCTAAGAAGAGGCA # Right flank : TAAGTATTGTCACATTATTGCAGGCAATTTGTTGCCCGTGAGCAAGTTTTTGCCTCGCCAATTTTCGCGTTATCATGCGCTTAAAGCAGAATAAGCGAGGATGTCAAAGCCATGACAAAAGATATTAGTCGGTACAATATGCGTTGGGTTGAAGGGGACACTTTACCTGAAGCTCCAAAGCCTAAACTTTCTCCGAAAGAAAGGTATTTAAAGCAACTCCAAGAGAATCATCGACAATCTGAAGAAACGTGGTCTTATGTCCAAGCAAACGAAGACCGTTATGCATTACAAAGAGCGGATGTCCTTACTCGCCGAAATGCCTCACAAATGCTTGATGACTCTCTTCGTGACTCACTAAGTTCGCAGTGTTCACTTGAAGAAGAAATGGCAAAGAATCATCAACATGTTCTTATTGCAGACTTAGAAGATGCCCATAAAATCTTGCACAACATTTGGTTGGAGTCTGGTCGTGATGTTGCTGCAATTGCTGCGAGTATCAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //