Array 1 3-696 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKQ01000011.1 Psychrobacter sanguinis strain SM868 contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 3 33 100.0 34 ................................. CGCAGTTATTCAGCAGAGTTTGGGATTGTGCTAA 70 33 100.0 33 ................................. TGCCCCTACTCTGACTACTGCCATGGTAGCCAA 136 33 100.0 34 ................................. GTGAAGCTTATATCAAAGCATCTAACCTAAACTA 203 33 100.0 33 ................................. GGTGTCGTCTAACGGGTTAACGTGGCTCTTATT 269 33 100.0 33 ................................. TTAGCTGACCCTGCTACCGCTACTCAAGCTGAG 335 33 100.0 34 ................................. AACTAATACCAATGGAAGCTTGACGCCAGACTAC 402 33 97.0 33 ...................A............. GCTTTATACAAGCGACGCGACGGGTAACCGATT 468 33 100.0 32 ................................. TAGTACAACCACATGCCCCCAGTCTCTTTCGG 533 33 100.0 33 ................................. TGTGCTCTTTATAGCATATCTGTCCGCCCATCT 599 33 100.0 32 ................................. CATCTGGATTTAGAGAGAAAGAAGCTATTGCG 664 33 90.9 0 .........A.....TC................ | ========== ====== ====== ====== ================================= ================================== ================== 11 33 98.9 33 TTCGCACCCTATCACGGGTGCGTGGATTGAAAC # Left flank : AAT # Right flank : CTCTAACCTATCTAATCTTTTAGTATCTTATAATTTAGGATATTTATGGATACAATACTTTCATATTCTATGAGTATTAAACAAAACTTGCTCCGTATGATATAAAGCTATATATTTTCAGCAGTATTTAGAAAGCATATATAAATAATTACTGATGTAAATACTTAATGACAGCTAGCAGACACTACAGCCCCCATCTTAGACGGTGTTTGCGCCTATTTTAATAGGTGATAAACCTAAAGAGTGAGCAATGGTAGCAAAAAGCCCCTTTAATTTAGGGGCTTAACTTGTTATCTTGTCATCCTTCATCTCTATCTGTTAGATTTAGCAGCATTTTTCTTAATTAAAACTATTCTTCTTTAGGCTAATTATTAGTAATTAGCCCCTTTTTGTATTTGATTTTATGACACATACCTCTCAGGCAGATACCCTGTCTCGCCGAACTCAATATATTCAAGTCCTATTAATGGGCATCAGTGCTTTTGTTATGAATACCACTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCTATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,1.01 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 35449-41192 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKQ01000015.1 Psychrobacter sanguinis strain SM868 contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 35449 33 100.0 33 ................................. CAAAATTGAATAAATATTTATTTAAAAATGTCT 35515 33 100.0 33 ................................. CTGACCCTCGCATTGATGCTAAGGCGGTATCAA 35581 33 100.0 34 ................................. TGCATTAACAAATATAAAGTCTGACTTGTCCATA 35648 33 100.0 32 ................................. TCGCTTGCCTCTCAGCGTCTTTTATCGCCTCA 35713 33 100.0 33 ................................. GATAGCGCCCTGCTTGCGTAGCTCAGTCTTAAC 35779 33 100.0 35 ................................. TGTAGTGAGCAATGTTAAGATGCGCAATATCATAG 35847 33 100.0 32 ................................. AGCCCTATTGTAAGCGGCTCGTATCTTGTTGC 35912 33 100.0 36 ................................. ATAGTGTTTCCACCACCAATCACACCCTTGCCTTTG 35981 33 100.0 33 ................................. CTATAATCGCTAAGTTTCTCAGTGTGATGTATG 36047 33 100.0 32 ................................. TATAGCTGTAGCCGCCAAACTTGTTGAACTTG 36112 33 100.0 34 ................................. TCACGGGATGCGCGGTTAACTATACAACTGAGCC 36179 33 100.0 33 ................................. TTACATGATGACGACCCTGACCGCCTAGTTAGC 36245 33 100.0 33 ................................. CCTAGTGTCACCCAGCTTATCCGACAAATAGCC 36311 33 100.0 33 ................................. ATCAACGGTAAGCGGCATTGACTCGTTAGGCAC 36377 33 100.0 33 ................................. GCATACCACGCCCTGCAATTTGCACATAAAGCA 36443 33 100.0 33 ................................. AATTTGGTCAAGAAGAACTACAACAAGCAACAG 36509 33 100.0 33 ................................. ATTTGCGCGTGTTTTGTGACTCGTTTTGGGTCT 36575 33 100.0 32 ................................. TACCAAATAGCCCAATAGTAACGCTTGAAATC 36640 33 100.0 32 ................................. CGCAAGTCGGCAACATCATTAACATTAGTGAC 36705 33 100.0 33 ................................. AAGCCCCGTGGCAATAACAGCAAAATGAAGAAT 36771 33 100.0 33 ................................. TCTACATAAACCCGCCATGTCTTGTCGTAAGCC 36837 33 100.0 34 ................................. ATTGCCTGCCTCTAGCTCAATTAGTCTTTTAACT 36904 33 100.0 32 ................................. ATCAAGCATTAGTGCATACCTCTCTGCAAAAT 36969 33 100.0 33 ................................. TCTTTGTAGAAGTAATCACCTGCAACAAGGTTG 37035 33 100.0 35 ................................. ACGAAATAGGCGCTTAGCATCAAACAAGGTATGTG 37103 33 100.0 32 ................................. TTGAGCAAACAACTCTTCTTTGTCTGTTAATT 37168 33 100.0 34 ................................. CCCCTTAGTTGTGCCACTGCCATGAGCGTGGATT 37235 33 100.0 34 ................................. AATCTTACCCTCAGCGACTAGGCGCTCTATTGCA 37302 33 100.0 33 ................................. CTCGTAATGGCAACCAATCTGAACGCAAATATC 37368 33 100.0 35 ................................. CATCTCTATATCTACTGGATCAGCCATGTAATTTC 37436 33 100.0 33 ................................. ACACACAGTATGGTAAGGATTGTGAATTCGAAC 37502 33 100.0 32 ................................. AGATAGGCACGTATGGGTCAAAAATCAGCAAA 37567 33 100.0 33 ................................. TTTTAACGATATAAGCGGATAGCTGCCAATCTT 37633 33 100.0 33 ................................. ATTTAGCTTAGGCTTAAAATAACCCTCACCCTT 37699 33 100.0 32 ................................. GATTGTCGGCTCAGGCTTAGCAGCTTTAAACC 37764 33 100.0 33 ................................. GACCCAGCCGCAGGGGATATATGCGGACGTGTC 37830 33 100.0 33 ................................. TAGCAGCGCATTAGCCGCATCGACCTCGCCTTG 37896 33 100.0 34 ................................. ATGGAGCAACCGTAAATACTCGCAACTACACATG 37963 33 100.0 34 ................................. GGGGCTTTGTCATTGTGTCTTGTGCTTGCAAGCA 38030 33 100.0 36 ................................. GTGGCGGTACGCTACAGCGCTTACACGTATCAGAGT 38099 33 100.0 34 ................................. ATTTTCAAGTAAGGCGCTGCGCATCTCACTCCAT 38166 33 100.0 33 ................................. ACTCAGCTTGTGATTATGCAGAAAGAGACATCT 38232 33 100.0 32 ................................. TTAGGGGGCTTTTAACAGAAGCTGAGTGGATG 38297 33 100.0 34 ................................. TTAGTCGGCTTGCTTCAACATGAATTGACTCATC 38364 33 100.0 35 ................................. AATAGTCCAAACAATTAAAGACGCTGAGATTGATG 38432 33 100.0 33 ................................. TACTGAGTCAGCTATCTCTAACATCTCGTCAAA 38498 33 100.0 34 ................................. TCAATTAAATAGCCATCTTTTGAGCAGATGCGCT 38565 33 100.0 32 ................................. CAGAGATAACCACGAGCTGATGACTTTCGTGT 38630 33 100.0 34 ................................. CGACTAGCTCACCTGATTGGATTTTATCTAGCAC 38697 33 100.0 31 ................................. TGTGTGCATAATGTGTGCGGTGCACCTATAA 38761 33 100.0 34 ................................. CTATAACTGTAGCCGCCAAACTTGTTGAACTTGT 38828 33 100.0 35 ................................. GCTGGGGTAAGCTTTGGTAACTTGCGCATCATCAA 38896 33 100.0 35 ................................. TTTACTCCTACCGAGTTAGAGTTGTACCGAGGCGA 38964 33 100.0 36 ................................. TTATCACCCGAGTCAGATATTGCTAAGTAGTTAAAC 39033 33 100.0 35 ................................. AAGTACAAATGGCTCAAAAGCGTTTATGCGTTTGG 39101 33 100.0 33 ................................. CTCGAACATAACGCCCTGCTGCACACACTCGTC 39167 33 100.0 35 ................................. TTGATACGGCTTTAGCATCAATACGAGGGTCGGGG 39235 33 100.0 33 ................................. TCGCAGCAGCTTGTCAGCTTTTGCTCTGGCCTC 39301 33 100.0 33 ................................. ACACCTCCTGTAAACTCTTGCCACCGCTGCTCT 39367 33 100.0 33 ................................. ACGAGCTTGTCTAACCCTGTTAGCCAGTGTGCT 39433 33 100.0 33 ................................. TTTTATTAGGGGTTATTCTTGTAAACGTTTATT 39499 33 100.0 33 ................................. ACCGCCATACTCAATATATGTTTTGCCTGCTGA 39565 33 100.0 32 ................................. ACCCTAATCTCTTTTATCTGCTCAGTTGTCAT 39630 33 100.0 32 ................................. TCCTCAAGCAGCTTTGTCGCTATTGCGCTGCG 39695 33 100.0 34 ................................. TCTGTAGATGCCACAAGACCTTTGCAGGCTTTTT 39762 33 100.0 33 ................................. TGTTGCTGTATCGTTAGCTGCTACCTTTTTACT 39828 33 100.0 32 ................................. TTACCGGTGGGCATAACATCAATAGACAAGCC 39893 33 100.0 33 ................................. TAGGCGCATATTGCTAGTGCGGGGCAGTCTTAT 39959 33 100.0 32 ................................. TCGTAGCTCGTAAGCTTGCTTAGCAGTGGTTG 40024 33 100.0 34 ................................. CTCACTCATTCCGACCAGTTCGCCTGATTGGATT 40091 33 100.0 35 ................................. AGGGCGAGCCTGAAGTGAAACAGCAAGATAACGAG 40159 33 100.0 34 ................................. ATTGTTTGTTGCTGGGTCGAAACCGCAAGGCTTG 40226 33 100.0 35 ................................. ATAATGCTGGTGTAGCTGTGCAGCGTGTGGCCACT 40294 33 100.0 35 ................................. TGTGTGCATAATGTGTGCAGCAGACTTATAAATCA 40362 33 100.0 33 ................................. AGTAACGGTGATATAACAGTAACATCAGGGGCA 40428 33 100.0 32 ................................. TACCAAATAGCCCAATATTAACGCTTGAAACC 40493 33 100.0 33 ................................. TGGCCTGTAAACTGCCAATGCCAAACGCTCTTC 40559 33 100.0 33 ................................. GTCCGGAATTGAATAAGGCAATCATCTTAACTG 40625 33 100.0 33 ................................. TGTGCTCTTTATAGCATATCTGTCCGCCCATGT 40691 33 100.0 34 ................................. AATCTCACAGCCTGTATCGTCGTCAAATGCTATG 40758 33 100.0 34 ................................. TGCCTCGCCTCTGGTATCGGCTCGTCACAATCAA 40825 33 100.0 34 ................................. ACTCACCCCAAACCAATCGAGCCTGCCTCTCTGC 40892 33 100.0 33 ................................. AGTTCCGCAGCCGATAAAGGTTTAGAACGCCGC 40958 33 100.0 34 ................................. CTGCAAAGTCGTCATAGTTGGCAATATCTAAAGG 41025 33 100.0 35 ................................. ATAGATAACAATAAGGAAAACTGTGACTTGGACAA 41093 33 100.0 34 ................................. CTTTTGAGAGTTTTTGGGATGCCTATGCTAAGAA 41160 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 87 33 100.0 33 TTCGCACCCTATCACGGGTGCGTGGATTGAAAC # Left flank : GATGCAGGTGGCGCTAAAAGGTTAAGACATATCGCCAAAAACTGTCTAAATTATGGACAGCGTGTACAATACTCTGTGTTTGAAATAGAGGTAAATCCTGCGCAATGGACAACCCTTAAAGCAACGCTTGAGAAGATTATCGACCCCAAAACAGATAGTCTGCGCTATTATTACCTTGGCAAAAACTGGCAACGTAGAGTCGAGCACATCGGTGCAAAACCTGCGTTAGACTTAAATGATATGTTGTTGTTTTAAAGTTACCCTAAGTTTTTTGTATAATAGTGGCTGTTATAAGGTCACTGCGAACCTATAGCGTACATAAAATCTCTAGGAGATTCGCAATTGATTCGCAAACTATTTAACAACTTGATTTTATTAACTTTATTTTTTTAGCTTTGACGATTTGGTAAATAAGCTATTTGCCAAATCTTGCCCTATGATAGAGGCTCGCAAATTTAAGGGTTTTTTTCTAACTTTATCTGCAAGTTAACACATAGGCT # Right flank : C # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCCTATCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //