Array 1 635968-635395 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP023415.1 Vescimonas fastidiosa strain MM35 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
    635967	    33	  90.9	    35	CGG..............................	GGATGCACTGTCAGTGATCTGCTGGGTGAGGAGCC 	
    635899	    33	  97.0	    35	A................................	ATGCCCAGCACGGTCAGAACGCCGCCGCTGACGAA 	
    635831	    33	  93.9	    34	............G.....C..............	GAGACCAGGAACCGCAAGAAGTTCTGCTCCCGCT  	
    635764	    33	 100.0	    34	.................................	GTGTGTGCCCGACTCGGGCATGGAAAGGAGCAAC  	
    635697	    33	 100.0	    36	.................................	ACCCCAAAGGGCGTACAGGTCACCAGCGTCACCAGG	
    635628	    33	 100.0	    34	.................................	GATGGCCCTGCCTGCTACTGCATCGAGCCGGGTG  	
    635561	    33	  97.0	    34	...........T.....................	GACGAAGCCATGAGGGTGAGGTGAATCTATGGCA  	
    635494	    33	  97.0	    34	............G....................	ATGAAGTGCCGCTATCTTGATGAGCTGACCGGAG  	
    635427	    33	  93.9	     0	...........T..........C..........	|                                   	
==========	======	======	======	=================================	====================================	==================
         9	    33	  96.6	    35	GTCGCACCCCGCAAGGGGTGCGTGGATTGAAAT	                                    	       

# Left flank :   ATTTTGAATATGTTTGAAAATGACCACTCCGCCGCGCGGGGCAAGATGGCCGTCCGGGAACTGATCGTTTTCAAGCATGACTGTGAGCTGGGCTGTGCCCCTGCCCATAAGCTCTTTGAACTGGTGAAGGCGGCACGAAAGGACGGTGTGACTACGCCTAGATGCTATGACGATTATGCCGTCACCGTGGACGAAGAGAAACTGCCGGAGGGCGTAATCTGCACACGGATGGGGTGATTTATCCCGAGGAGGATTTCCTCCAACTCTCCGGTTTGCAGCACTTCAAGTTCTGCCGCCGCCAGTGGGCGCTTATCTATATCGAGAACCAGTGGGCGGAAAATTTCCGCACCACCGATGGAGCGATCCTTCACGAAAACGCCCACAACGGTGGATTTACCGAGAGCCGGGGAGACCTCCTCGTCACCCGGGATATGCGCATTTTTCCCGGACACTGGGTGTGTCCGGCGCCTGCGATGTGTTGGAATTCCGCCGGGGAAAAA
# Right flank :  GGGCTCGGGAACACCCAAGCGCGCCCCGCCTGCAAAAAATAGAGCTTGACAATCTCAAAACCTATTTTCTATAATAGTATTATAATCCGTTCACCTATGAACGAAGCAAGCGCTTTTTTGGAGGTTTTTGCAATGGGAATGGAAAAAGAACTTTTCCAAATTACGGAGGCTGCCCGGGCCTGCGGTCTCTCCCGCAGCACGCTCCTGCGCATGGAGGAAAAGGGACTGTTAACCCCGGCCTACATCGCGCCTGACAGCGGCCGCCGCTACTACGACAATCATAATGTGGCCCGTATCATGCAAATAGAGAAGTTCAAGTCCATGGGCATAAGTAATGAGCAGATTATCAACTACTTCGTCCGGGGCGGAGAAGCCACCGATATACTCGCAACTCTGGTGGAGCATTTGCACGATTTTCAACGCAGCGTGGAGGAGCTTCGTCTGCGGGTACGGGAAAAGGCCGGTATGTCCGTACAAGTAATAACGCTGCCTGCTGTTAC

# Questionable array : NO	 Score: 8.68
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCCGCAAGGGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-8.30,-9.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [4-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,9.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//