Array 1 2984027-2984840 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019338.1 Pseudomonas aeruginosa strain L10 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2984027 28 100.0 32 ............................ ATCACCGGCGCGCTGGCCTTCGGCGCCCAGGC 2984087 28 100.0 32 ............................ TTATCAGTAAATACGTGGCGACTTGGCCACCC 2984147 28 100.0 32 ............................ TTGCTGCGTGTTGCAGCGACACCCGTTCAACA 2984207 28 100.0 32 ............................ ACTGGAGATACGTGCACAGATCGGACGACACG 2984267 28 100.0 32 ............................ ATATCAGTTTGCATGGTTTGCTCCTACCAAGC 2984327 28 100.0 32 ............................ TTGCATCGCACCCTCCTGCTCACCGACCAGGC 2984387 28 100.0 32 ............................ TGAACGTTCACGCATCACGCGCCTTTCCGGCC 2984447 28 100.0 32 ............................ AGGCAGACGAGTACGCGCGGTCTCGCGAAGTG 2984507 28 100.0 32 ............................ AGAACATGGCCCGGCTCCCGACGTTGCTGCGG 2984567 28 100.0 32 ............................ ATGACGCAAGACGAGCTTGTCCGCCTTCTGGC 2984627 28 100.0 32 ............................ GTTTGCAGGAAGCGGCGCTATCGCACCGAACT 2984687 28 100.0 32 ............................ ATAGCTACGCCGAGCCAGTTGTAAGCTGACGC 2984747 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA ATAGGC [2984759] 2984813 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAACACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGGTCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGGGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCACCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2994472-2993364 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019338.1 Pseudomonas aeruginosa strain L10 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2994471 28 100.0 32 ............................ CGGTCCTGCCAGTACTGCGGCAGGATCTGGTC 2994411 28 100.0 32 ............................ AGCCTGGCGCCCTTCGAGTCCATCCAGCCCGG 2994351 28 100.0 32 ............................ CATCCAATTCGCCGATCCGGCGCAAGCGCCCG 2994291 28 100.0 32 ............................ ACGAAGCAGATCGCCGAATGCGGCGTCAGCGC 2994231 28 100.0 32 ............................ GTGGGTGCAAATCGCGATTCTGGTCGCGTCGT 2994171 28 100.0 32 ............................ TGAATATCAGCCTGCAAAGCGTCGTCGTAGTA 2994111 28 100.0 32 ............................ AAGCCGGGCCGATGTTCGAGCCTGGCTGCGTG 2994051 28 100.0 32 ............................ TGGACAATGCGCAGCCCAGGCGCTGGATTTAC 2993991 28 100.0 32 ............................ ATGCGAGGCTGATCGAGGTGCGCGGTTCTGTT 2993931 28 100.0 32 ............................ GTGCGCGGATGGCTGGTATCTCGAGCACGATT 2993871 28 100.0 32 ............................ AGGCAAACAACGGAAAGATCACCACCGAAGGC 2993811 28 100.0 32 ............................ AACGAAACAGGCCCAGCACAGCCGCTTGATAA 2993751 28 100.0 32 ............................ ACAAGACGCTCATCGACGGCAGCATCGAGACG 2993691 28 100.0 32 ............................ AAGGTGACGATGCACAGCTGTTGCGCGCGGTT 2993631 28 100.0 32 ............................ ATCCTCGAACAGCCCGGGTTCGGTCGCCTCCA 2993571 28 100.0 32 ............................ AGGAGTTTGCGGCCCCGCTCCCTGCGGCTCTC 2993511 28 100.0 32 ............................ TTCACGGCGGGCTTGATGTCCGCGTCTACCTG 2993451 28 100.0 32 ............................ TTGCCGAGTACGATGCCTGATACATGAATCCA 2993391 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 19 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCAAAAGACCTTTCGCGCCCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCTCGCTTGGAAGCTCACGCTCCTCACACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //