Array 1 1364022-1362395 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072360.1 Prevotella melaninogenica strain F0091 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1364021 37 100.0 40 ..................................... GTAACAAGACAGAGGGACTTGTTCAGTATAATGTTGTGCG 1363944 37 100.0 34 ..................................... CTATCGGCATAGCAAGTAAGGAGAACAGAAACGG 1363873 37 100.0 34 ..................................... ACAGACTATATTGAAGACTCTGATTATAACGATG 1363802 37 100.0 34 ..................................... AATGTACAATTAGAACTATTATTTTTCATAGCTT 1363731 37 100.0 34 ..................................... TCGCGTCCAGGATGCGAAAGACAGACGTTACTGG 1363660 37 100.0 33 ..................................... TTTGCCAAAATGGTTGTCGGAGACAATGGCAAA 1363590 37 100.0 33 ..................................... CATCTGCAAAGACGCAGACGTTAAAAACTTCGA 1363520 37 100.0 36 ..................................... TTTTTCAGTTACAGGTTACATCTGCAAAGACGTAGA 1363447 37 100.0 36 ..................................... AGCATTTCAGAAGTACCATTTTTAAAGTAAAAATTA 1363374 37 100.0 34 ..................................... CAAAACAGGTTACGTGAGTTCGAGTCTCACTTAG 1363303 37 100.0 34 ..................................... GCATTGCAAACAACTAAAGTACTTGATAATATCT 1363232 37 100.0 34 ..................................... AAACTAATTGGCAATGGTTTAAAGATAATAATTT 1363161 37 100.0 37 ..................................... ATTAAAAGAAATTCTTTTAGAAGAAGATGCTAGGAAT 1363087 37 100.0 38 ..................................... TTACACTTATGCTTACAATTAGAGAAACCATCTCAAGA 1363012 37 100.0 34 ..................................... CATTATACAGCTAAATATCATAATCTTGAAATTA 1362941 37 100.0 38 ..................................... CCAACAGAAATTACCATTTTTAGTAGCCGTAGATTTGT 1362866 37 97.3 33 ........T............................ AATACCAGCAGCTAACATAGGAATAGCTGCAAT 1362796 37 97.3 35 ........T............................ TGTACGTATTAATTACTACAAGCGCTAAGAGAGTT 1362724 37 97.3 39 ........T............................ CAGAGTGCGATATATGGCAAGTAAAAGTAGTTCGTACTC 1362648 37 97.3 34 ........T............................ ATCGCCTAAGAACACAGAAGGTACAGCATACGAT 1362577 37 97.3 36 ........T............................ TTTGTGCTGCAAATTATGAAAAGAATGTTGTTGAAC 1362504 37 97.3 36 ........T............................ CATTGCCACAAAGGTTACAGCTTGTATCAGGGATAA 1362431 37 97.3 0 ........T............................ | ========== ====== ====== ====== ===================================== ======================================== ================== 23 37 99.2 35 GTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAG # Left flank : CTTGTTTTATGTTTTAATGGAAGTTCTCTTAGAGTTTAGAGTCAAGGTTGTTGCTATAAGGCGTGTGTTTAACAAGGTCTTAATCCTTGTTTTAATGGAAATTACTCTCGGTGTTTTAATTTTTAGTTTATAATTTTAGTTGTCTTAATCCTTGTGTACACAAAAAGCTAATTATAAAAAAGTTCTTCCACACTATCGGGTAATAAGTATTCCCAAAGAAGAAAGATATTTGTTACATAAAACAACAGAAAGTTTTATTTCCGTTTTGCTGTCACGTTTAACATTTAATTTATCTTACTGTAATATAGTAAGTTAATAACCTACTACAAATGACAGGAATGACAGGAAATCAAGTTTGGGGTAATTCTGTAAAACGAAATCGGCTAAATGGTATAGATACTTTTGGGCTCTTTCGAAATGCAGAGTGATGAAGTAAGTTTCCCTATGTAATAGGACACACAGAACCCAATAAAGATGATGATTTATGGGCAGGCTGGTAT # Right flank : AGCTAAGACTTATATTTCTTTGTTTATCGCTGTTTGAAGTGTATTTACTTTTGGCAGAACGCTTTAGTTAACATAAATTAACCACTTTGTTTGCGACTGCAAAGGTACAAATAATTATTCAAAATTTCAAAGATCGATGCGTTAAATATTCTTTAAGAGAGGTAATCTTACTGGAATATTACTTCTTATTTACCCTATTAAAAGAACAATGTATTACGCGAATGAGTGATAATATCTATATTGAGATCTTCACCGATAATCTTCATAGCTTGCAACTGATCAGTGGAGACGGGACATACGATGATGCTGTCATGATTGTCGTATAATGACTGTACTTCGGCAAGATCATTCTTGATTTGGTCATAAACGGTCTTGTCGAGGTCGGCAAGAAAGATGGATCGTTGTATGCGAGTACATCCTTTACGTTCCAAATATTTTGCAATATGATAGCGCACCTTGTTGCTTTCAATATCATACATAACGAAGAATAGCATATTAGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCTCGGAG # Alternate repeat : GTCTTAATTCTTGTTTTAATGGAAGATACTCTCGGAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 412147-409641 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072359.1 Prevotella melaninogenica strain F0091 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 412146 37 100.0 38 ..................................... CATATCATTATTATTGTTTTTTTGTTTTTTTTACTCGA 412071 37 100.0 35 ..................................... GCACGCTCATTTCCCTTTTGGTGCTGACTATTAGC 411999 37 100.0 37 ..................................... ACATAGTCGCCAGTAGAGTTTACAAAGCTACCAGCTA 411925 37 100.0 36 ..................................... GCAAACCCTTCGCTCATTATAGTTCCATCAGACTCG 411852 37 100.0 35 ..................................... AAGACAATACACGCCTAACCGTCATTTCTCTTTTG 411780 37 100.0 33 ..................................... CTTCAAAGAACACGTTTTCGTATTTCTCTACAG 411710 37 100.0 34 ..................................... CACTTAAAGTTCTTTTTCTATTCATAGTTATTTA 411639 37 100.0 35 ..................................... CTTCGCTCATCGTTACACCATCAGACTCGTATTCT 411567 37 100.0 37 ..................................... AAATCTTCGCTGTTACTCCTGCTAAGAAGGAGAAGGC 411493 37 100.0 35 ..................................... TCTTCTGTTTCCTCTTCACCAGTCGATGCGCCAGA 411421 37 100.0 32 ..................................... GCCTAAAACTTCTCCTTCATAGTTTTTACAAG 411352 37 100.0 37 ..................................... ACTACCAACCACTCTTTGCATGCAGCAAATAACTCTT 411278 37 100.0 34 ..................................... TTAAAGTACTATTAATAATACTGAATGTTATGCT 411207 37 100.0 34 ..................................... CCTTTTACTGACTTAGCACCATTCTTGATGAGTT 411136 37 100.0 37 ..................................... CTCTTGAAAGAGATTCTCTAATACTTGTCATAATATT 411062 37 100.0 34 ..................................... TACAACTAAGCATACGCAAACTTTAATCATACTG 410991 37 100.0 38 ..................................... TTTGTTGTTTATGAATTTATAATTATTTCGGGAAACCT 410916 37 100.0 37 ..................................... GTAATACTACAACTTCTTTCTTTTAGCGTTCTTTCCA 410842 37 100.0 34 ..................................... ACAGTATAGTAAGATTTCATACTTACGTTGTAAG 410771 37 100.0 40 ..................................... AAATAGTACTGCGAATCACAGGGTTACCTGACTTATCAAG 410694 37 100.0 35 ..................................... TCTTTGCAGATGTAACCTGTAACTGAAAAATTGTT 410622 37 100.0 38 ..................................... AGCTGGTAATGACTTGAGGTTGATTGTTACACCAATCT 410547 37 100.0 38 ..................................... TTCCCATCAGTGTCGACTTCCTCGCTTATCATGCGATT 410472 37 100.0 34 ..................................... CCATGAGAATTACGGCTCCAAAGTTCTACCTTAT 410401 37 100.0 36 ..................................... CGCAGTGTGCGTAGAGTATCGAGGAAAGTTAGTGCG 410328 37 100.0 35 ..................................... CTCTTGTTAAAGAACGATGGGTAAATGTTTACAAT 410256 37 100.0 35 ..................................... GTGAAGTAAAGTAGAGATTAGACAGTGCTCTTATG 410184 37 100.0 36 ..................................... TACTGTCATAATTCTTATTCGTTTAGTTAATGATGT 410111 37 100.0 35 ..................................... GTGTCTACATTAGATGGAACAGGGAAAATAGAATG 410039 37 100.0 34 ..................................... ACAACCATTTTGGCAAAACCTTTGTCTTCGCCAT 409968 37 100.0 39 ..................................... TCACCTGTTTTATCTGTTATATATTTTAATGTTCTCCGA 409892 37 97.3 34 ..........T.......................... ACCAAAGTAGCTGCTGGTTTAATTTTACCAATCT 409821 37 100.0 38 ..................................... CTGAGAGTGAAAGAGTACAACGAACCTTGTTGTATTCG 409746 37 100.0 33 ..................................... ACAGTGTGATAATGAATGAGTGTTTTTCCGTCG 409676 36 81.1 0 ......-......C.......A..........T.CCT | ========== ====== ====== ====== ===================================== ======================================== ================== 35 37 99.4 36 CTCCGAGAGTATCTTCCATTAGAACAAGGATTAAGAC # Left flank : GTCTACACTGATTCTTGAGATGGAAGACACAATAACGTGTGTGGGCTTTATGGGAGGCGATGCCGATGCTGAAGAAGTTGACAGGCTCGCTGAACACATTCGATGTCATCATGCAGGACTGAAAATAGGGTGGTATACAGGGCGCACAGCTATTTCTCCGCTCATCAATCAGCAACGCTTCGATTATATCAAAGTCGGACCTTATCTCCGCCACCTCGGTGGTTTAGATTCTCCTTGCACCAATCAGCGAATGTATCGTCGCTGTGCTGATGGCAGCTTTGAGGATATCACCTCCCGCTTCTGGAAGGCACAAGCTGGCGAGAGTTTATAAAAACCCGTCTTTGATTAAGATAATTTAAGTCTGCGCTCTTTGACATTCTGTAAAAAAATGACTACCTTTGCACTCGCTTTTAAGACGGTTAATTTGTGTTAACAAAAACTAAGTTGGTAGGTCTTATTATTATCAAAACCTCTGAAATAAAGGATTCGTAGGTCTTGCT # Right flank : CAGAACACTTTGTGTCCGTCATTAAGGGTGCGTACTTCGAGGGTAGCAAATGATTTTTATAACGGGAGATTTTACCTTTCAAGTAATTGCAAAGTAATCAATCTTCTTTTTATTCATTTAGAGAGTAATTCTCTGTGGTAACATGATGGGGGAGGGTAGAGATGGGTGGTGAATGCTATGTGCCTATCATCTCTGATGTTGTTAAGTTTACTCCTCTTAAAAAATGGTTTAAGGGGGAATAAGATGGGAAGTATAGGAAAAGCCGACTGTTAATCAAACCAAGATTATTAAATAAGCAAAATATCTTGGTGAGAAGTACGATTTAGTTTTTTAGGTGGCTTCTATTAATTAGCTCTGTTCGAGAATAAAACGAGAGTGAGCGAAGGAGTTATGTAGACATAACACTTGAGTGAACTGGCAATTTGAGCCAAATCCACCTTAAGATTAATAAAAGCAAATACTACGGTTCGGAACTTATATATAATGATATAAGGTCTAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCCGAGAGTATCTTCCATTAGAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 1087999-1092348 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072359.1 Prevotella melaninogenica strain F0091 chromosome 2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 1087999 47 100.0 30 ............................................... GTATATGAGTACCTTAAAGTTCACTTTGGT 1088076 47 100.0 30 ............................................... TCTCCAAAGTGTTGTAAGTGAACTCTTTTC 1088153 47 100.0 30 ............................................... TCATCTACTACTATATACCAATCATTAGGA 1088230 47 100.0 30 ............................................... ATCGTGTATACTGGTCAGACTTCTGCTCAT 1088307 47 100.0 30 ............................................... AGATGTCCGTGATGCTCTTATCAATGCTCC 1088384 47 100.0 30 ............................................... AATGTTGTTAATCGTGGTAATGTTATCATG 1088461 47 100.0 30 ............................................... AGGCGTTAGCCTTACTCCGACATTGATACA 1088538 47 100.0 30 ............................................... AACTTAAACCTCTTGCTATCTCATTCGACA 1088615 47 100.0 30 ............................................... CACGTGCCTTTAACGTTCCCGACCCTAACT 1088692 47 100.0 31 ............................................... TCCGTATGCTAATACTACTATTGGTGTCTCT 1088770 47 100.0 30 ............................................... AAAGGGTATTTAATACCAAACCATTTGGAA 1088847 47 100.0 30 ............................................... GAGTTTCCTATCGTTGTGGCTGACCCAGAT 1088924 47 100.0 30 ............................................... AAAGAACTGCTTATTCTTATGAAATTGAAA 1089001 47 100.0 30 ............................................... GCAAAGTGCAGGACTGTCTACTTCGATGCT 1089078 47 100.0 30 ............................................... GTCTACGATGTGAGTAACGCCACCGTTAAG 1089155 47 100.0 30 ............................................... GCATTGTTAGTGCAAAAATCTGTCAACTGG 1089232 47 100.0 30 ............................................... AATGCAAGTCGAGGAGTACACAGAAGATTA 1089309 47 100.0 30 ............................................... ATTTACCCAACTCATTGTCACCCGTAATAA 1089386 47 100.0 29 ............................................... CAACTCAAAAGCACCGCTTTCGTTATTCT 1089462 47 100.0 29 ............................................... ACCGCAAAAAAGGGAGCGTGTGTTCTTTA 1089538 47 100.0 29 ............................................... TCTTCAAAGCGTTGTTAGTGAACTGTTTT 1089614 47 100.0 30 ............................................... TTCATCTCCTGCTGGTCTTTCTGATGATGA 1089691 47 100.0 29 ............................................... TGAGGTCTGCTTCGCTTATCCTTGCAAAA 1089767 47 100.0 30 ............................................... ATTGCTGGTGCTATTAAGACTACTGAAGAG 1089844 47 100.0 30 ............................................... ATGCAAGCATCTAATGTTCTTGCGCAATTT 1089921 47 100.0 30 ............................................... TGCCCCCATAACGACAGTACCTTAATGTAT 1089998 47 100.0 30 ............................................... CAATTCAATAAGATGAGTGCTGAAACTAAT 1090075 47 100.0 30 ............................................... GGTTATCGTGTTGCAGGTCGCTTGGGTTGG 1090152 47 100.0 30 ............................................... CAAGTTCATTTCTATATCAATCCTGGACTT 1090229 47 100.0 30 ............................................... CTATATAAGGTTATCTGATTTGTCTGTTTT 1090306 47 100.0 29 ............................................... CAATTTAATAAAATGAGTGCTGAAACTAA 1090382 47 100.0 30 ............................................... AATAGCGTCATTCATGGATAGCTTGCATCT 1090459 47 100.0 30 ............................................... GTTCCCACTTACTCTAAGCTAAAGTACAAG 1090536 47 100.0 30 ............................................... CCATACGAAAAGGCGAAACTTCGTCACGCC 1090613 47 100.0 29 ............................................... AGTTGAAACCTCTTTCTATATCATTCGAC 1090689 47 100.0 30 ............................................... GTAATCGTGTCGGTTCTATACTTCCTATTA 1090766 47 100.0 30 ............................................... GGGCGACAATGATGATAACTTCACTATTCA 1090843 47 100.0 30 ............................................... AGCCTGCAAACGCTTCATTTCTTCATAGAT 1090920 47 100.0 30 ............................................... CCCATTTTTGAAGCGTCGAGGAGGAAATGT 1090997 47 100.0 29 ............................................... CCAAAGGGTGGGAGTACTTCAAAACTGAA 1091073 47 100.0 30 ............................................... TATGTCAGACTTGGAAGTCGAGGAACTCAA 1091150 47 100.0 30 ............................................... GGGAAACCCCCGCCCCCAAAATTAAAGATA 1091227 47 100.0 30 ............................................... GCAAGAGATTACGGGTGAAATCTTGCAAAA 1091304 47 100.0 30 ............................................... AGCCGAAGCAGAGAAACGAGCCGAAGCAGA 1091381 47 100.0 30 ............................................... TTTGCCCCGCCTAATAAAGCAAACGTATGA 1091458 47 100.0 30 ............................................... GGCAGCAGCAGAGCAATTTTTTAAGGACAA 1091535 47 100.0 30 ............................................... TATACACTATGCAGACGAGTTGAAAAAAGA 1091612 47 100.0 29 ............................................... TTGTACTATGAGTTTACGAATATAGCCTT 1091688 47 100.0 30 ............................................... TTATCCAGATGGGAAGTAAGAAGATACGTG 1091765 47 100.0 29 ............................................... AATGTACTCGGTGGTATTTCTTATATTGC 1091841 47 100.0 29 ............................................... TCGTGGTGGTATTGGTAGCGGATACAGCG 1091917 47 100.0 30 ............................................... TCTTCAGCTGTATCTACTGCTGCTAATTAT 1091994 47 97.9 30 .......A....................................... AAACGGTCAGAGATGATAGTCGCAATGTAT 1092071 47 100.0 30 ............................................... AAATTAAAGGTATTATTGCTGGTGCTATTA 1092148 47 100.0 30 ............................................... AGCAGGGATGTCACACTTGAAAACAAAAGA 1092225 47 97.9 30 .......A....................................... TCTTCAGCTGTATCTACTGCTGCTAATTAT 1092302 47 97.9 0 .......A....................................... | ========== ====== ====== ====== =============================================== =============================== ================== 57 47 99.9 30 GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Left flank : AGAAAGCAGAAACTGAGAAAGTATATTGTGGGATGGGTAGGTTACTACCACCTTGCCAATATGAAACGGTTTTGCCTTGAAACCGACGAATGGCTAAGGCGACGCATACGCATGTGCATATGGAAAGCTTGGAAGAAGCCAAAGACGAAAGTTGTCAATCTCATTAGGTGCGGAATTGCCAAGTGGCAAGCCTACCAATGGGGGAACACTCGCCTGGCTTATTGGCGCATAGCAGGCAGTCCCATCTTGAGTATAGCCATGTCAAACGACCGGCTACGCAAGCAGGGTTATGTCTGCTTATTGGATGCCTATCTCGGATGGAACCCAAAATAGGAACCGCCGTATGCTGAACGGCATGTACGGTGGTGTGAGAGGTCGGTAAACGTGAAAATAGGAGATAAATACCTTTGATTAGCGTTTACCTCCTACTCGATTTTGCATTTTTTTATTTGTACAAAAGCCTTGTTACTTGCTGTAGTACAGGTAAATATGGCTTTGCG # Right flank : CGTGCTTGCGGTTAGAATCATATAGCAAATGGTTGTACGACTTTTATGCCTTCTTACCAGACACGAGGGTGAAGATAATGAGGATGCCAACGATGAAAATGAAGAGGAAGGAGCCTAATGCACCTGCATAGATTCTACCCGTGTGTACCTCTAAAGCAAGACTCCAAAGCGACATGGGCTTATCTTTCAATTCTTCTGGTTGTGTGGCGAAGGACGAACCTTGAAAATAGGTTGCTATACACTCCTTGTTTGTGAAGTCAGAACTGTAGCCAGAGATTGTCTGTTCATCTGGAGCTGTGCCTGGTATGTTAGGAGTAGACCCCATTGAATCGTTGTAGTAAAGCACTACGTTGTTCTTTCGGTCCCAATAGAATAGTCCATCGAAAGAGCCTACTATCCATGATTTGTTACTTGCATAGTGCCAGACATTTTGCCCCATAACACTAACGGGAGGTGCTGTCGTTACTGGTGTTGGCTTTGCCGAGAGAGTCTTAAGCGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //