Array 1 67975-68369 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDK01000001.1 Limosilactobacillus antri DSM 16041 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 67975 29 100.0 32 ............................. TTATCGGCCCCCGGGCCACCATCGCCACCAGT 68036 29 100.0 32 ............................. GGCTTCTAGTTCATTTTGTGAGAACTTCATCG 68097 29 96.6 33 .................A........... ATGTAACTAGTCTTGCCCTTGCTTTAATTCTTC 68159 29 93.1 32 .............A.G............. TTACCAACTGCTGGTTGGTCACCCCGCTTGAT 68220 29 89.7 32 .............A.G............C GAACCTTCACCACAAGGGAAAGGCCATCCCCA 68281 29 96.6 32 ............................C TTCAAAGAGCTTCTTTTAGACGGCAAAGTCGT 68342 28 79.3 0 ............CAC........-...AA | ========== ====== ====== ====== ============================= ================================= ================== 7 29 93.6 32 GTATTCCCCATGTGTATGGGGGTGATCCT # Left flank : GATTTAACGTTATTCGACTTAAAAGAGTACTTTGCTGGCGAAAAAACATTGCTATCTCCAGCGTATGAAAAAGAGCTGACTGGCCTATGGTTATCGCAATTTCAGCATAGTTTTCCGGCATTTATCGATCGCTTTCAGCTTAATTGTTTTGTCGATGAAGAATATAACGTTTTAGACATTACCAGCAAGCAAACGAAAATCATTGAAAGAATTCCTGATAGGAAAACGCTAGCGGCTTCGGTACCAGTCTATATGGATTCATTGATGTCTCTAATTCGACGGGGATATTTTAATTAAGAGGAAATCCCAAAGGGCACTTGAGTGATAACTTAGTTCGAATTAGTGTGCAGTGGTTTAAATATCTTTCACATTTAATTACAAAAATGGGCGAAATAAAACTTCATAGAAATTAATCAAGAAGCGGTATGCTAGATCAGCAAACTAAATAAAGATTGAGGTATACTTAGATCAAAAGCTTGATTTGTTAGGGATCTTTTAGT # Right flank : AATAATAAAACTTCTAGTGCCTGCCTTCACATTGCATTTAGGTTTGGTCCTTGCTAAAATTACTGTGAAACGTTTTCATGGGGGAGTTATAAAATGGGCAAGCTGTCAAAACAGGCACTTTCATTATGGGCAAAGAAGGAAAATCGGGAGGGCCAGGAACTCTGGCTGCCACTAGTTGCGCACTTGGTTGATACTAAAAATGTTATCAACTGGTTATACACCCATTGGTTAAATGACAGCCAACGACAGGTTTTACAGCAAGATCTGACGACGTCTGAAATTGAACAACTGGTTAACTTTGTCGGTTATTTTCATGATATTGGCAAGGCCACGCCGGCTTTTCAAACTAAGCCTTCCTATAATCGTGATTATGAACTGGACGATCAGCTGATAGAGCAGCTCCTGCGAAGCGGTTTTGAAAAACTTGCGGAATATGAACCGGCCTTCAGAAGTAAATCCCCTCACGCATTAGCTGGCGAGACCATCTTAGAAACATCAGG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTGTATGGGGGTGATCCT # Alternate repeat : GTATTCCCCATGTATGTGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 77777-78241 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZDK01000001.1 Limosilactobacillus antri DSM 16041 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================================================================================== ================== 77777 29 96.6 32 ............................C TGACTTGAATTTTTCATGCTCCTTCTCCAATT 77838 29 100.0 32 ............................. CGCCAGTAGTGCCCACACTCCTGCTCAACCCA 77899 29 100.0 32 ............................. TCATCAATCTTCATCTTCGTTACCTCCTAAAG 77960 29 100.0 32 ............................. GACTTGCTCAGTACCTGACGTTCGAACATAAG 78021 29 96.6 101 ............................C CGAAAAAGCGCCGTGAGATCATTCCTCATCAATATGGAGACTCCCGCTATTAGATCGCATTCTGCGTCTACTATGGTATATAATATAACCATTAATTTCTG 78151 29 79.3 32 ..........AAGCCA............. GAAACGATATTCGGCAAAGCGAATATCTAACT 78212 29 82.8 0 ...........C...A........T.TA. | A [78235] ========== ====== ====== ====== ============================= ===================================================================================================== ================== 7 29 93.6 44 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : ACTGCGCAAATTATTTCAATTGGCGCGGTGAAACGAATTGCTGGGCATACAACAACATTTTATCGTCTCGTGAAACTGCAATCGGGTAAAAAGTTGGCAGGTGACATTGCGCGGCTGACCGGATTAAATAGCCAGCAACTAGCTACGGAAGGTGTAGCAGTGAAGGAAGCGCTGATTGATTTACAAAGTTTTGCGAAAAAACTGCCAATCGTTGGTTACAATTTATTGTTTGATGAACGTTTTTTACAAACTGCGGTGATTAGGGCAGGGATTGTTCAATTTAATAATAAGATGGTGGATGTATTACCGTATGTTAAAACGGTCGATAAGTTTTGCGATAATTATCATTTAGCGACTATCTTAACTAGGTATGGTATTAAAAATGAGCAGGCACATAATTCGTTGGCGGATGCAACCGCGACGATGAAACTAGTTGATAAACTCATTAAAATTCACGGCTTTCGGATATAAGAACCGCGGCAGATCAGGGATCTTTTAGT # Right flank : TAATTTGAAGTGTATCGATCCGCTTGGAAAAAGATTGTGGAACCTGTCATCAGGCTTCGGAATTTGCTGAGGCTCCGTCTAGTATTGAGGGGCTCCCCAACATTTTTTAGAATTACCGTAAAGAGGATTGGAGAGTTATGGGAAAAAGAAAACGACAAACGATAAAGCTTTCTGAAAACACCCATTTTTCTGATGAGTTTGAGCAAATGCTAGTGGAGTCGGGTATTATCCATTCTAAGGGAGCAAATGCGACTGACCGGATCGGGCAGGATTCTGATAAGTTAATTATTTCTAAATCCGGACGGGAACCGCAGACACTTGATGAGCTTCGCCAGCTGTTGAATTCTGGTAAAAGGTTGTTATCCTTGGATTTTGAATTTTACAATGATCCTAAAGGAACCCCGTGGATTCGTGAGATTGCTGGCAAGCAGTTCGGCTCCCCAACCTATTTTCAGTACCGGCTGTTCAACAAAGAAATGACCCCAGAGCGCCAGCTTGAG # Questionable array : NO Score: 4.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:-1.05, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //