Array 1 383507-383740 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV834249.1 Streptococcus sp. HMSC074F09 Scaffold98, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 383507 36 100.0 30 .................................... GTTGTTTCATTATTTGATAAATATTTATCA 383573 36 100.0 30 .................................... TTCAGTTGACTATACAACTCAAGGTCAGTA 383639 36 100.0 30 .................................... TGATACCTTTATTTTCATACACAATCCACT 383705 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTAGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGATTCATGAGGATTAACATCTGTTTCATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACAAACCTCTAATGGATAATATAGAACAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCAGGAGATTGTGTGTACTCACGAATTTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACACAATTAAACATAAAGAAGTGCTTATTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTAGTCCTGTTGTTATGATGGATGATTATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTGAGAGTCGACCTAGTCCGAAAAAGATTGTTTTAGAGCTG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 383964-384329 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV834249.1 Streptococcus sp. HMSC074F09 Scaffold98, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 383964 36 100.0 30 .................................... TCAGGAGATTGTGTGTACTCACGAATTTTT 384030 36 100.0 30 .................................... ACACAATTAAACATAAAGAAGTGCTTATTT 384096 36 100.0 30 .................................... ATTAGTCCTGTTGTTATGATGGATGATTAT 384162 36 100.0 30 .................................... ATTGAGAGTCGACCTAGTCCGAAAAAGATT 384228 36 100.0 30 .................................... GAAACTTCGATTAGTTTGCGTACTCGCTCA 384294 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : GAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGTTGTTTCATTATTTGATAAATATTTATCAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCAGTTGACTATACAACTCAAGGTCAGTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGATACCTTTATTTTCATACACAATCCACTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGATTCATGAGGATTAACATCTGTTTCATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACAAACCTCTAATGGATAATATAGAACAAA # Right flank : CGAAGTATACTACGGTTAGAGATTGGCTCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTAATAACTGTCCGTTTTGCCATTTCTTGCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAATTGTTTTTGTTGTAATATAAAGTCGACGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCAGGAGATTGTGTGTACTCACGAATTTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGCTAGCATGGCACAAAAATAGCGTTGGAATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGAGGGGAAAATATCAATGCCGAATGCTGAGTTTTAGAGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 3 384554-384853 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV834249.1 Streptococcus sp. HMSC074F09 Scaffold98, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 384554 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 384620 36 100.0 30 .................................... TCAGGAGATTGTGTGTACTCACGAATTTTT 384686 36 100.0 30 .................................... GCTAGCATGGCACAAAAATAGCGTTGGAAT 384752 36 100.0 30 .................................... AGAGGGGAAAATATCAATGCCGAATGCTGA 384818 36 91.7 0 .................................NNN | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 98.3 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : TGGTTCCAAAACACACAATTAAACATAAAGAAGTGCTTATTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTAGTCCTGTTGTTATGATGGATGATTATGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATTGAGAGTCGACCTAGTCCGAAAAAGATTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGAAACTTCGATTAGTTTGCGTACTCGCTCAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGAAGTATACTACGGTTAGAGATTGGCTCAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTAATAACTGTCCGTTTTGCCATTTCTTGC # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGATGGTACAAAATCATTTGTTGGTACTGATGTTTTAAAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCGATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCAAGATTGTTCTAC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //